Francis J. Doyle III

85 papers C 12Journal 63Unranked 9

Year	Rank	Type	Title / Venue / Authors
2023	J	`jnl`	A Probabilistic Approach to Blood Glucose Prediction in Type 1 Diabetes Under Meal Uncertainties. IEEE J. Biomed. Health Informatics Saúl Langarica, Maria Rodriguez-Fernandez, Francis J. Doyle III, Felipe Núñez
2023	J	`jnl`	Safe and Personalized Meal Bolus Calculator for Type-1 Diabetes Using Bayesian Optimization. IEEE Trans. Biomed. Eng. Dinesh Krishnamoorthy, Francis J. Doyle III
2022	J	`jnl`	Safe Bayesian Optimization using Interior-Point Methods - Applied to Personalized Insulin Dose Guidance. CoRR Dinesh Krishnamoorthy, Francis J. Doyle III
2021	J	`jnl`	Activity detection and classification from wristband accelerometer data collected on people with type 1 diabetes in free-living conditions. Comput. Biol. Medicine Marzia Cescon, Divya Choudhary, Jordan E. Pinsker, Vikash Dadlani, Mei Mei Church, Yogish C. Kudva, Francis J. Doyle III, Eyal Dassau
2021	J	`jnl`	Automated Insulin Delivery for Type 1 Diabetes Mellitus Patients using Gaussian Process-based Model Predictive Control. CoRR Lukas Ortmann, Dawei Shi, Eyal Dassau, Francis J. Doyle III, Berno J. E. Misgeld, Steffen Leonhardt
2021	J	`jnl`	Using Iterative Learning for Insulin Dosage Optimization in Multiple-Daily-Injections Therapy for People With Type 1 Diabetes. IEEE Trans. Biomed. Eng. Marzia Cescon, Sunil Deshpande, Revital Nimri, Francis J. Doyle III, Eyal Dassau
2020	J	`jnl`	A dual-feedback loop model of the mammalian circadian clock for multi-input control of circadian phase. PLoS Comput. Biol. Lindsey S. Brown, Francis J. Doyle III
2019	J	`jnl`	Pharmaceutical-based entrainment of circadian phase via nonlinear model predictive control. Autom. John H. Abel, Ankush Chakrabarty, Elizabeth B. Klerman, Francis J. Doyle III
2017	J	`jnl`	A kernel module for pulse-coupled time synchronization of sensor networks. Comput. Networks Yongqiang Wang, Krishna Mosalakanti, Felipe Núñez, Socrates Deligeorges, Francis J. Doyle III
2017	J	`jnl`	Gaussian Process-Based Model Predictive Control of Blood Glucose for Patients with Type 1 Diabetes Mellitus. CoRR Lukas Ortmann, Dawei Shi, Eyal Dassau, Francis J. Doyle III, Steffen Leonhardt, Berno J. E. Misgeld
2016	J	`jnl`	Periodic zone-MPC with asymmetric costs for outpatient-ready safety of an artificial pancreas to treat type 1 diabetes. Autom. Ravi Gondhalekar, Eyal Dassau, Francis J. Doyle III
2016	J	`jnl`	Synchronization of pulse-coupled oscillators to a global pacemaker. Syst. Control. Lett. Felipe Núñez, Yongqiang Wang, Andrew R. Teel, Francis J. Doyle III
2015	—	`conf`	Empirical dynamic model identification for blood-glucose dynamics in response to physical activity. CDC Isuru S. Dasanayake, Dale E. Seborg, Jordan E. Pinsker, Francis J. Doyle III, Eyal Dassau
2015	J	`jnl`	Global synchronization of pulse-coupled oscillators interacting on cycle graphs. Autom. Felipe Núñez, Yongqiang Wang, Francis J. Doyle III
2015	J	`jnl`	Quantifying Stochastic Noise in Cultured Circadian Reporter Cells. PLoS Comput. Biol. Peter C. St. John, Francis J. Doyle III
2015	J	`jnl`	Synchronization of Pulse-Coupled Oscillators on (Strongly) Connected Graphs. IEEE Trans. Autom. Control. Felipe Núñez, Yongqiang Wang, Francis J. Doyle III
2015	C	`conf`	Velocity-weighting to prevent controller-induced hypoglycemia in MPC of an artificial pancreas to treat T1DM. ACC Ravi Gondhalekar, Eyal Dassau, Francis J. Doyle III
2014	J	`jnl`	Collective oscillation period of inter-coupled biological negative cyclic feedback oscillators. CoRR Yongqiang Wang, Yutaka Hori, Shinji Hara, Francis J. Doyle III
2014	J	`jnl`	Design and in silico evaluation of an intraperitoneal-subcutaneous (IP-SC) artificial pancreas. Comput. Chem. Eng. Justin J. Lee, Eyal Dassau, Howard C. Zisser, Francis J. Doyle III
2014	J	`jnl`	Global Synchronization of Pulse-Coupled Oscillators Interacting on Cycle Graphs. CoRR Felipe Núñez, Yongqiang Wang, Francis J. Doyle III
2014	C	`conf`	Mobility induced network evolution speeds up synchronization of wireless sensor networks. ACC Yongqiang Wang, Felipe Núñez, Francis J. Doyle III
2014	—	`conf`	Moving-horizon-like state estimation via continuous glucose monitor feedback in MPC of an artificial pancreas for type 1 diabetes. CDC Ravi Gondhalekar, Eyal Dassau, Francis J. Doyle III
2014	J	`jnl`	Reducing Risks in Type 1 Diabetes Using H IEEE Trans. Biomed. Eng. Patricio Colmegna, Ricardo S. Sánchez Peña, Ravi Gondhalekar, Eyal Dassau, Francis J. Doyle III
2013	J	`jnl`	Core modular blood and brain biomarkers in social defeat mouse model for post traumatic stress disorder. BMC Syst. Biol. Ruoting Yang, Bernie J. Daigle Jr., Seid Y. Muhie, Rasha Hammamieh, Marti Jett, Linda R. Petzold, Francis J. Doyle III
2013	J	`jnl`	Exponential Synchronization Rate of Kuramoto Oscillators in the Presence of a Pacemaker. IEEE Trans. Autom. Control. Yongqiang Wang, Francis J. Doyle III
2013	J	`jnl`	Increasing Sync Rate of Pulse-Coupled Oscillators via Phase Response Function Design: Theory and Application to Wireless Networks. IEEE Trans. Control. Syst. Technol. Yongqiang Wang, Felipe Núñez, Francis J. Doyle III
2013	J	`jnl`	Statistical Analysis of the Pulse-Coupled Synchronization Strategy for Wireless Sensor Networks. IEEE Trans. Signal Process. Yongqiang Wang, Felipe Núñez, Francis J. Doyle III
2013	J	`jnl`	The influence of global cues and local coupling on the rate of synchronization in the presence of time delays. Autom. Yongqiang Wang, Francis J. Doyle III
2012	C	`conf`	Bio-inspired hybrid control of pulse-coupled oscillators and application to synchronization of a wireless network. ACC Felipe Núñez, Yongqiang Wang, Francis J. Doyle III
2012	J	`jnl`	Control-Relevant Models for Glucose Control Using A Priori Patient Characteristics. IEEE Trans. Biomed. Eng. Klaske van Heusden, Eyal Dassau, Howard C. Zisser, Dale E. Seborg, Francis J. Doyle III
2012	J	`jnl`	Core module biomarker identification with network exploration for breast cancer metastasis. BMC Bioinform. Ruoting Yang, Bernie J. Daigle Jr., Linda R. Petzold, Francis J. Doyle III
2012	J	`jnl`	Energy-Efficient Pulse-Coupled Synchronization Strategy Design for Wireless Sensor Networks Through Reduced Idle Listening. IEEE Trans. Signal Process. Yongqiang Wang, Felipe Núñez, Francis J. Doyle III
2012	J	`jnl`	Exponential synchronization rate of Kuramoto oscillators in the presence of a pacemaker CoRR Yongqiang Wang, Francis J. Doyle III
2012	J	`jnl`	Increasing sync rate of pulse-coupled oscillators via phase response function design: theory and application to wireless networks. CoRR Yongqiang Wang, Felipe Núñez, Francis J. Doyle III
2012	J	`jnl`	Modeling Cortisol Dynamics in the Neuro-endocrine Axis Distinguishes Normal, Depression, and Post-traumatic Stress Disorder (PTSD) in Humans. PLoS Comput. Biol. K. Sriram, Maria Rodriguez-Fernandez, Francis J. Doyle III
2012	J	`jnl`	Modular Closed-Loop Control of Diabetes. IEEE Trans. Biomed. Eng. Stephen D. Patek, Lalo Magni, Eyal Dassau, Christopher W. Karvetski, Chiara Toffanin, Giuseppe De Nicolao, Simone Del Favero, Marc D. Breton, Chiara Dalla Man, Elisabeth Renard, Howard C. Zisser, Francis J. Doyle III, Claudio Cobelli, Boris P. Kovatchev
2012	J	`jnl`	Optimal Phase Response Functions for Fast Pulse-Coupled Synchronization in Wireless Sensor Networks. IEEE Trans. Signal Process. Yongqiang Wang, Francis J. Doyle III
2012	J	`jnl`	The collective oscillation period of inter-coupled Goodwin oscillators CoRR Yongqiang Wang, Yutaka Hori, Shinji Hara, Francis J. Doyle III
2012	—	`conf`	The collective oscillation period of inter-coupled Goodwin oscillators. CDC Yongqiang Wang, Yutaka Hori, Shinji Hara, Francis J. Doyle III
2012	J	`jnl`	Weakly Circadian Cells Improve Resynchrony. PLoS Comput. Biol. Alexis B. Webb, Stephanie R. Taylor, Kurt A. Thoroughman, Francis J. Doyle III, Erik D. Herzog
2011	J	`jnl`	On influences of global and local cues on the rate of synchronization of oscillator networks. Autom. Yongqiang Wang, Francis J. Doyle III
2010	J	`jnl`	Closed-Loop Control of Artificial Pancreatic Beta -Cell in Type 1 Diabetes Mellitus Using Model Predictive Iterative Learning Control. IEEE Trans. Biomed. Eng. Youqing Wang, Eyal Dassau, Francis J. Doyle III
2010	J	`jnl`	Confidence from uncertainty - A multi-target drug screening method from robust control theory. BMC Syst. Biol. Camilla Luni, Jason E. Shoemaker, Kevin R. Sanft, Linda R. Petzold, Francis J. Doyle III
2010	—	`conf`	Control circuitry for fear conditioning associated with Post-Traumatic Stress Disorder (PTSD). CDC Ruoting Yang, K. Sriram, Francis J. Doyle III
2010	—	`conf`	The influences of global and local cues on the synchronization rate of interconnected oscillator networks subject to time delays. CDC Yongqiang Wang, Francis J. Doyle III
2010	J	`jnl`	Vulnerabilities in the Tau Network and the Role of Ultrasensitive Points in Tau Pathophysiology. PLoS Comput. Biol. Theresa M. Yuraszeck, Pierre Neveu, Maria Rodriguez-Fernandez, Anne S. Robinson, Kenneth S. Kosik, Francis J. Doyle III
2009	—	`ch.`	Automatic Control in Systems Biology. Handbook of Automation Henry Mirsky, Jörg Stelling, Rudiyanto Gunawan, Neda Bagheri, Stephanie R. Taylor, Eric Kwei, Jason E. Shoemaker, Francis J. Doyle III
2009	—	`conf`	Stability analysis for set-point-related indirect iterative learning control. CDC Youqing Wang, Francis J. Doyle III
2008	J	`jnl`	Circadian Phase Resetting via Single and Multiple Control Targets. PLoS Comput. Biol. Neda Bagheri, Jörg Stelling, Francis J. Doyle III
2008	J	`jnl`	Real-time optimization of the pulp mill benchmark problem. Comput. Chem. Eng. Mehmet Mercangöz, Francis J. Doyle III
2008	J	`jnl`	Sensitivity Measures for Oscillating Systems: Application to Mammalian Circadian Gene Network. IEEE Trans. Autom. Control. Stephanie R. Taylor, Rudiyanto Gunawan, Linda R. Petzold, Francis J. Doyle III
2007	J	`jnl`	A feasible solution technique for higher-dimensional population balance models. Comput. Chem. Eng. Mark A. Pinto, Charles D. Immanuel, Francis J. Doyle III
2007	J	`jnl`	Quantitative performance metrics for robustness in circadian rhythms. Bioinform. Neda Bagheri, Jörg Stelling, Francis J. Doyle III
2006	J	`jnl`	Circadian rhythm: A natural, robust, multi-scale control system. Comput. Chem. Eng. Francis J. Doyle III, Rudiyanto Gunawan, Neda Bagheri, Henry Mirsky, Tsz Leung To
2006	J	`jnl`	Editorial. IEEE Trans. Control. Syst. Technol. Francis J. Doyle III
2006	J	`jnl`	Optimal genetic manipulations in batch bioreactor control. Autom. Kapil G. Gadkar, Radhakrishnan Mahadevan, Francis J. Doyle III
2006	J	`jnl`	Run-to-run control of blood glucose concentrations for people with type 1 diabetes mellitus. IEEE Trans. Biomed. Eng. Camelia Owens, Howard C. Zisser, Lois Jovanovic, Bala Srinivasan, Dominique Bonvin, Francis J. Doyle III
2005	C	`conf`	Batch control of genetic alterations for optimal metabolic engineering. ACC Kapil G. Gadkar, Radhakrishnan Mahadevan, Francis J. Doyle III
2005	J	`jnl`	Editorial New Online Submission Procedure. IEEE Trans. Control. Syst. Technol. Francis J. Doyle III
2005	J	`jnl`	Editorial. IEEE Trans. Control. Syst. Technol. Francis J. Doyle III
2005	J	`jnl`	Iterative approach to model identification of biological networks. BMC Bioinform. Kapil G. Gadkar, Rudiyanto Gunawan, Francis J. Doyle III
2005	—	`conf`	Phase Sensitivity Analysis of a Circadian Rhythm Gene Network. CDC/ECC Rudiyanto Gunawan, Francis J. Doyle III
2005	J	`jnl`	Sensitivity analysis of oscillatory (bio)chemical systems. Comput. Chem. Eng. Daniel E. Zak, Jörg Stelling, Francis J. Doyle III
2005	J	`jnl`	Unconventional systems analysis problems in molecular biology: a case study in gene regulatory network modeling. Comput. Chem. Eng. Daniel E. Zak, Rajanikanth Vadigepalli, Gregory E. Gonye, Francis J. Doyle III, James S. Schwaber, Babatunde A. Ogunnaike
2004	J	`jnl`	Analysis of linear programming in model predictive control. Comput. Chem. Eng. Daniel R. Saffer II, Francis J. Doyle III
2003	J	`jnl`	A distributed state estimation and control algorithm for plantwide processes. IEEE Trans. Control. Syst. Technol. Rajanikanth Vadigepalli, Francis J. Doyle III
2003	J	`jnl`	Hybrid model-based approach to batch-to-batch control of particle size distribution in emulsion polymerization. Comput. Chem. Eng. Francis J. Doyle III, Christopher A. Harrison, Timothy J. Crowley
2003	C	`conf`	Nonlinear metabolic model-based control of ethanol in Escherichia Coli. ACC Kapil G. Gadkar, Francis J. Doyle III
2003	C	`conf`	Reachability of particle size distribution in emulsion batch polymerization under mid-course correction policies. ACC Yang Wang, Charles D. Immanuel, Francis J. Doyle III
2002	C	`conf`	Tracking of a reference particle size distribution trajectory in semi-batch emulsion polymerization. ACC Charles D. Immanuel, Francis J. Doyle III
2001	J	`jnl`	Analysis and Neuronal Modeling of the Nonlinear Characteristics of a Local Cardiac Reflex in the Rat. Neural Comput. Rajanikanth Vadigepalli, Francis J. Doyle III, James S. Schwaber
2001	C	`conf`	Batch-to-batch optimization of PSD in emulsion polymerization using a hybrid model. ACC Timothy J. Crowley, Christopher A. Harrison, Francis J. Doyle III
2001	C	`conf`	Experimental studies of the sensitivity of particle size distribution in emulsion co-polymerization. ACC Charles D. Immanuel, Francis J. Doyle III, Cajetan F. Cordeiro
2001	J	`jnl`	Model-based predictive control studies for a continuous pulp digester. IEEE Trans. Control. Syst. Technol. Philip A. Wisnewski, Francis J. Doyle III
2001	—	`conf`	Stochastic kinetic analysis of transcriptional feedback models for circadian rhythms. CDC Daniel E. Zak, Francis J. Doyle III, Dionisios G. Vlachos, James S. Schwaber
2000	C	`conf`	Advanced model predictive control (MPC) for type I diabetic patient blood glucose control. ACC Robert S. Parker, E. P. Gatzke, Francis J. Doyle III
2000	C	`conf`	Inverse problem approach to modeling of particulate systems. ACC Alan W. Mahoney, Francis J. Doyle III, Doraiswami Ramkrishna
2000	C	`conf`	Use of the World Wide Web for distance education in a process control course. ACC Francis J. Doyle III
1999	J	`jnl`	A model-based algorithm for blood glucose control in Type I diabetic patients. IEEE Trans. Biomed. Eng. Robert S. Parker, Francis J. Doyle III, Nicholas A. Peppas
1999	—	`conf`	Plant-friendly identification of second-order Volterra models. ECC Francis J. Doyle III, Robert S. Parker, Ronald K. Pearson, Babatunde A. Ogunnaike
1997	J	`jnl`	A Neuro-Mimetic Dynamic Scheduling Algorithm for Control: Analysis and Applications. Neural Comput. Harpreet S. Kwatra, Francis J. Doyle III, Ilya A. Rybak, James S. Schwaber
1996	J	`jnl`	A normal form approach to approximate input-output linearization for maximum phase nonlinear SISO systems. IEEE Trans. Autom. Control. Francis J. Doyle III, Frank Allgöwer, Manfred Morari
1996	J	`jnl`	Identification of structurally constrained second-order Volterra models. IEEE Trans. Signal Process. Ronald K. Pearson, Babatunde A. Ogunnaike, Francis J. Doyle III
1996	J	`jnl`	Nonlinear model predictive control of a simulated multivariable polymerization reactor using second-order Volterra models. Autom. Bryon R. Maner, Francis J. Doyle III, Babatunde A. Ogunnaike, Ronald K. Pearson
1995	J	`jnl`	Nonlinear model-based control using second-order Volterra models. Autom. Francis J. Doyle III, Babatunde A. Ogunnaike, Ronald K. Pearson