Francesco Napolitano

36 papers B 3Journal 20Unranked 12

Year	Rank	Type	Title / Venue / Authors
2025	—	`ed.`	Computational Intelligence Methods for Bioinformatics and Biostatistics - 19th International Meeting, CIBB 2024, Benevento, Italy, September 4-6, 2024, Revised Selected Papers CIBB Luigi Cerulo, Francesco Napolitano, Francesco Bardozzo, Lu Cheng, Annalisa Occhipinti, Stefano Maria Pagnotta
2024	J	`jnl`	AI identifies potent inducers of breast cancer stem cell differentiation based on adversarial learning from gene expression data. Briefings Bioinform. Zhongxiao Li, Antonella Napolitano, Monica Fedele, Xin Gao, Francesco Napolitano
2024	—	`conf`	Identification of Differential Alternative Splicing Events: Assessing Tools Performance with Different Sequencing Parameters. CIBB Luca Faretra, Antonio Ammendola, Massimo Pancione, Francesco Napolitano, Luigi Cerulo
2024	J	`jnl`	Multi-task deep latent spaces for cancer survival and drug sensitivity prediction. Bioinform. Teemu J. Rintala, Francesco Napolitano, Vittorio Fortino
2024	—	`conf`	Novel Approaches for Spatially Resolving Gene Responses and Injection Site Localization in Transcriptomic Data. CIBB Antonio Ammendola, Felicita Masone, Luigi Cerulo, Francesco Napolitano
2023	J	`jnl`	A user-friendly software for modelling extreme values: EXTRASTAR (EXTRemes Abacus for STAtistical Regionalization). Environ. Model. Softw. Davide Luciano De Luca, Francesco Napolitano
2022	J	`jnl`	Impact of computational approaches in the fight against COVID-19: an AI guided review of 17 000 studies. Briefings Bioinform. Francesco Napolitano, Xiaopeng Xu, Xin Gao
2022	J	`jnl`	Special issue on computational biology and bioinformatic applications to the COVID-19 pandemic. Quant. Biol. Francesco Napolitano, Xin Gao
2021	—	`conf`	Bio-Lightweight Structures by 3D Foam Printing. RTSI Daniele Tammaro, Andrea Lorenzo Henry Detry, Luca Landonfi, Francesco Napolitano, Massimiliano Maria Villone, Pier Luca Maffettone, Antonino Squillace
2020	J	`jnl`	A Siamese neural network model for the prioritization of metabolic disorders by integrating real and simulated data. Bioinform. Gian Marco Messa, Francesco Napolitano, Sarah H. Elsea, Diego di Bernardo, Xin Gao
2020	J	`jnl`	Automated Counting of Colony Forming Units Using Deep Transfer Learning From a Model for Congested Scenes Analysis. IEEE Access Somayah Albaradei, Francesco Napolitano, Mahmut Uludag, Maha A. Thafar, Sara Napolitano, Magbubah Essack, Vladimir B. Bajic, Xin Gao
2020	J	`jnl`	gep2pep: a bioconductor package for the creation and analysis of pathway-based expression profiles. Bioinform. Francesco Napolitano, Diego Carrella, Xin Gao, Diego di Bernardo
2018	J	`jnl`	gene2drug: a computational tool for pathway-based rational drug repositioning. Bioinform. Francesco Napolitano, Diego Carrella, Barbara Mandriani, Sandra Pisonero-Vaquero, Francesco Sirci, Diego L. Medina, Nicola Brunetti-Pierri, Diego di Bernardo
2017	J	`jnl`	repo: an R package for data-centered management of bioinformatic pipelines. BMC Bioinform. Francesco Napolitano
2016	J	`jnl`	Drug-set enrichment analysis: a novel tool to investigate drug mode of action. Bioinform. Francesco Napolitano, Francesco Sirci, Diego Carrella, Diego di Bernardo
2014	—	`conf`	Consensus Clustering in Gene Expression. CIBB Paola Galdi, Francesco Napolitano, Roberto Tagliaferri
2014	J	`jnl`	Ensemble Entropy for Monitoring Network Design. Entropy Leonardo Alfonso, Elena Ridolfi, Sandra Gaytan-Aguilar, Francesco Napolitano, Fabio Russo
2014	J	`jnl`	Mantra 2.0: an online collaborative resource for drug mode of action and repurposing by network analysis. Bioinform. Diego Carrella, Francesco Napolitano, Rossella Rispoli, Mario Miglietta, Annamaria Carissimo, Luisa Cutillo, Francesco Sirci, Francesco Gregoretti, Diego di Bernardo
2013	—	`conf`	An Adaptive Reference Point Approach to Efficiently Search Large Chemical Databases. WIRN Francesco Napolitano, Roberto Tagliaferri, Pierre Baldi
2013	J	`jnl`	An improved combinatorial biclustering algorithm. Neural Comput. Appl. Ekaterina Nosova, Francesco Napolitano, Roberto Amato, Sergio Cocozza, Gennaro Miele, Giancarlo Raiconi, Roberto Tagliaferri
2013	J	`jnl`	Bioinformatic pipelines in Python with leaf. BMC Bioinform. Francesco Napolitano, Renato Mariani-Costantini, Roberto Tagliaferri
2013	J	`jnl`	Drug Repositioning: A Machine-Learning Approach through Data Integration. J. Cheminformatics Francesco Napolitano, Yan Zhao, Vania M. Moreira, Roberto Tagliaferri, Juha Kere, Mauro D'Amato, Dario Greco
2011	—	`conf`	Supporting the Design, Communication and Management of Bioinformatic Protocols through the Leaf Tool. CIBB Francesco Napolitano, Roberto Tagliaferri
2010	B	`conf`	A scalable reference-point based algorithm to efficiently search large chemical databases. IJCNN Francesco Napolitano, Roberto Tagliaferri, Pierre Baldi
2010	J	`jnl`	Data Mining in Cancer Research [Application Notes]. IEEE Comput. Intell. Mag. Paulo J. G. Lisboa, Alfredo Vellido, Roberto Tagliaferri, Francesco Napolitano, Michele Ceccarelli, José David Martín-Guerrero, Elia Biganzoli
2009	B	`conf`	Global optimization, Meta Clustering and consensus clustering for class prediction. IJCNN Ida Bifulco, Carmine Fedullo, Francesco Napolitano, Giancarlo Raiconi, Roberto Tagliaferri
2009	—	`conf`	Metaclustering and Consensus Algorithms for Interactive Data Analysis and Validation. WILF Ida Bifulco, Carmine Fedullo, Francesco Napolitano, Giancarlo Raiconi, Roberto Tagliaferri
2009	J	`jnl`	Multiple data structure discovery through global optimisation, meta clustering and consensus methods. Int. J. Knowl. Eng. Soft Data Paradigms Ida Bifulco, Carmine Fedullo, Francesco Napolitano, Giancarlo Raiconi, Roberto Tagliaferri
2008	J	`jnl`	Clustering and visualization approaches for human cell cycle gene expression data analysis. Int. J. Approx. Reason. Francesco Napolitano, Giancarlo Raiconi, Roberto Tagliaferri, Angelo Ciaramella, Antonino Staiano, Gennaro Miele
2008	—	`conf`	Interactive Visualization Tools for Meta-Clustering. WIRN Ida Bifulco, Francesco Iorio, Francesco Napolitano, Giancarlo Raiconi, Roberto Tagliaferri
2008	J	`jnl`	Interactive data analysis and clustering of genomic data. Neural Networks Angelo Ciaramella, Sergio Cocozza, Francesco Iorio, Gennaro Miele, Francesco Napolitano, Michele Pinelli, Giancarlo Raiconi, Roberto Tagliaferri
2008	—	`conf`	Robust Clustering by Aggregation and Intersection Methods. KES (3) Ida Bifulco, Carmine Fedullo, Francesco Napolitano, Giancarlo Raiconi, Roberto Tagliaferri
2008	—	`conf`	Using Global Optimization to Explore Multiple Solutions of Clustering Problems. KES (3) Ida Bifulco, Loredana Murino, Francesco Napolitano, Giancarlo Raiconi, Roberto Tagliaferri
2007	—	`conf`	An Interactive Tool for Data Visualization and Clustering. KES (3) Francesco Iorio, Gennaro Miele, Francesco Napolitano, Giancarlo Raiconi, Roberto Tagliaferri
2007	B	`conf`	Clustering, Assessment and Validation: an application to gene expression data. IJCNN Angelo Ciaramella, Sergio Cocozza, Francesco Iorio, Gennaro Miele, Francesco Napolitano, Michele Pinelli, Giancarlo Raiconi, Roberto Tagliaferri
2007	—	`conf`	PCA Based Feature Selection Applied to the Analysis of the International Variation in Diet. WILF Faraz Bishehsari, Mahboobeh Mahdavinia, Reza Malekzadeh, Renato Mariani-Costantini, Gennaro Miele, Francesco Napolitano, Giancarlo Raiconi, Roberto Tagliaferri, Fabio Verginelli