Francesco Falciani

17 papers Journal 17
YearRankTypeTitle / Venue / Authors
2020 J jnl
Computationally predicted gene regulatory networks in molluscan biomineralization identify extracellular matrix production and ion transportation pathways.
Bioinform.
Victoria A. Sleight, Philipp Antczak, Francesco Falciani, Melody S. Clark
2020 J jnl
SAERMA: Stacked Autoencoder Rule Mining Algorithm for the Interpretation of Epistatic Interactions in GWAS for Extreme Obesity.
IEEE Access
Casimiro Aday Curbelo Montañez, Paul Fergus, Carl Chalmers, Nurul Hashimah Ahamed Hassain Malim, Basma Abdulaimma, Denis Reilly, Francesco Falciani
2019 J jnl
SAERMA: Stacked Autoencoder Rule Mining Algorithm for the Interpretation of Epistatic Interactions in GWAS for Extreme Obesity.
CoRR
Casimiro Aday Curbelo Montañez, Paul Fergus, Carl Chalmers, Nurul Hashimah Ahamed Hassain Malim, Basma Abdulaimma, Denis Reilly, Francesco Falciani
2019 J jnl
Systems biology reveals how altered TGFβ signalling with age reduces protection against pro-inflammatory stimuli.
PLoS Comput. Biol.
David Hodgson, Andrew D. Rowan, Francesco Falciani, Carole J. Proctor
2018 J jnl
Structure-Based Networks for Drug Validation.
CoRR
Catalina Cangea, Arturas Grauslys, Pietro Liò, Francesco Falciani
2016 J jnl
A Network Biology Approach Identifies Molecular Cross-Talk between Normal Prostate Epithelial and Prostate Carcinoma Cells.
PLoS Comput. Biol.
Victor Trevino, Alberto Cassese, Zsuzsanna Nagy, Xiaodong Zhuang, John M. Herbert, Philipp Antzack, Kim Clarke, Nicholas Davies, Ayesha Rahman, Moray J. Campbell, Michele Guindani, Roy Bicknell, Marina Vannucci, Francesco Falciani
2016 J jnl
ChainRank, a chain prioritisation method for contextualisation of biological networks.
BMC Bioinform.
Ákos Tényi, Pedro de Atauri, David Gomez-Cabrero, Isaac Cano, Kim Clarke, Francesco Falciani, Marta Cascante, Josep Roca, Dieter Maier
2012 J jnl
COMPADRE: an R and web resource for pathway activity analysis by component decompositions.
Bioinform.
Roberto-Rafael Ramos-Rodriguez, Raquel Cuevas-Diaz-Duran, Francesco Falciani, José Gerardo Tamez-Peña, Victor Trevino
2011 J jnl
A Systems Biology Approach Identifies Molecular Networks Defining Skeletal Muscle Abnormalities in Chronic Obstructive Pulmonary Disease.
PLoS Comput. Biol.
Nil Turan, Susana G. Kalko, Anna Stincone, Kim Clarke, Ayesha Sabah, Katherine Howlett, S. John Curnow, Diego A. Rodriguez, Marta Cascante, Laura O'Neill, Stuart Egginton, Josep Roca, Francesco Falciani
2011 J jnl
A computational framework for gene regulatory network inference that combines multiple methods and datasets.
BMC Syst. Biol.
Rita Gupta, Anna Stincone, Philipp Antczak, Sarah Durant, Roy Bicknell, Andreas Bikfalvi, Francesco Falciani
2011 J jnl
Knowledge management for systems biology a general and visually driven framework applied to translational medicine.
BMC Syst. Biol.
Dieter Maier, Wenzel Kalus, Martin Wolff, Susana G. Kalko, Josep Roca, Igor Marín de Mas, Nil Turan, Marta Cascante, Francesco Falciani, Miguel Hernandez, Jordi Villà-Freixa, Sascha Losko
2011 J jnl
Towards a System Level Understanding of Non-Model Organisms Sampled from the Environment: A Network Biology Approach.
PLoS Comput. Biol.
Tim D. Williams, Nil Turan, Amer M. Diab, Huifeng Wu, Carolynn Mackenzie, Katie L. Bartie, Olga Hrydziuszko, Brett P. Lyons, Grant D. Stentiford, John M. Herbert, Joseph K. Abraham, Ioanna Katsiadaki, Michael J. Leaver, John B. Taggart, Stephen G. George, Mark R. Viant, Kevin J. Chipman, Francesco Falciani
2008 J jnl
Functional modules integrating essential cellular functions are predictive of the response of leukaemia cells to DNA damage.
Bioinform.
Katrin Sameith, Philipp Antczak, Elliot Marston, Nil Turan, Dieter Maier, Tanja Stankovic, Francesco Falciani
2006 J jnl
GALGO: an R package for multivariate variable selection using genetic algorithms.
Bioinform.
Victor Trevino, Francesco Falciani
2005 J jnl
A Bayesian approach to reconstructing genetic regulatory networks with hidden factors.
Bioinform.
Matthew J. Beal, Francesco Falciani, Zoubin Ghahramani, Claudia Rangel, David L. Wild
2005 J jnl
Biomarker discovery in microarray gene expression data with Gaussian processes.
Bioinform.
Wei Chu, Zoubin Ghahramani, Francesco Falciani, David L. Wild
2004 J jnl
Modeling T-cell activation using gene expression profiling and state-space models.
Bioinform.
Claudia Rangel, John Angus, Zoubin Ghahramani, Maria Lioumi, Elizabeth Sotheran, Alessia Gaiba, David L. Wild, Francesco Falciani