Francesca Finotello

12 papers Journal 11Unranked 1
YearRankTypeTitle / Venue / Authors
2022 J jnl
nextNEOpi: a comprehensive pipeline for computational neoantigen prediction.
Bioinform.
Dietmar Rieder, Georgios Fotakis, Markus Ausserhofer, Rene Geyeregger, Wolfgang Paster, Zlatko Trajanoski, Francesca Finotello
2021 J jnl
Interpretable systems biomarkers predict response to immune-checkpoint inhibitors.
Patterns
Óscar Lapuente-Santana, Maisa van Genderen, Peter A. J. Hilbers, Francesca Finotello, Federica Eduati
2020 J jnl
NeoFuse: predicting fusion neoantigens from RNA sequencing data.
Bioinform.
Georgios Fotakis, Dietmar Rieder, Marlene Haider, Zlatko Trajanoski, Francesca Finotello
2020 J jnl
Scirpy: a Scanpy extension for analyzing single-cell T-cell receptor-sequencing data.
Bioinform.
Gregor Sturm, Tamás Szabó, Georgios Fotakis, Marlene Haider, Dietmar Rieder, Zlatko Trajanoski, Francesca Finotello
2019 J jnl
Comprehensive evaluation of transcriptome-based cell-type quantification methods for immuno-oncology.
Bioinform.
Gregor Sturm, Francesca Finotello, Florent Petitprez, Jitao David Zhang, Jan Baumbach, Wolf-Herman Fridman, Markus List, Tatsiana Aneichyk
2018 J jnl
Measuring the diversity of the human microbiota with targeted next-generation sequencing.
Briefings Bioinform.
Francesca Finotello, Eleonora Mastrorilli, Barbara Di Camillo
2018 J jnl
Optimizing PCR primers targeting the bacterial 16S ribosomal RNA gene.
BMC Bioinform.
Francesco Sambo, Francesca Finotello, Enrico Lavezzo, Giacomo Baruzzo, Giulia Masi, Elektra Peta, Marco Falda, Stefano Toppo, Luisa Barzon, Barbara Di Camillo
2017 J jnl
Hypoglycemia-induced EEG complexity changes in Type 1 diabetes assessed by fractal analysis algorithm.
Biomed. Signal Process. Control.
Fabio Scarpa, Maria Rubega, Mattia Zanon, Francesca Finotello, Anne-Sophie Sejling, Giovanni Sparacino
2017 J jnl
TIminer: NGS data mining pipeline for cancer immunology and immunotherapy.
Bioinform.
Elias Tappeiner, Francesca Finotello, Pornpimol Charoentong, Clemens Mayer, Dietmar Rieder, Zlatko Trajanoski
2015 — conf
EEG signal features extraction based on fractal dimension.
EMBC
Francesca Finotello, Fabio Scarpa, Mattia Zanon
2014 J jnl
Reducing bias in RNA sequencing data: a novel approach to compute counts.
BMC Bioinform.
Francesca Finotello, Enrico Lavezzo, Luca Bianco, Luisa Barzon, Paolo Mazzon, Paolo Fontana, Stefano Toppo, Barbara Di Camillo
2012 J jnl
Comparative analysis of algorithms for whole-genome assembly of pyrosequencing data.
Briefings Bioinform.
Francesca Finotello, Enrico Lavezzo, Paolo Fontana, Denis Peruzzo, Alessandro Albiero, Luisa Barzon, Marco Falda, Barbara Di Camillo, Stefano Toppo