Florentino Fdez-Riverola

167 papers A* 4A 1C 8Misc 39Journal 93Unranked 21

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	PIBAdb: a public cohort of multimodal colonoscopy videos and images including polyps with histological information. Comput. Methods Programs Biomed. Alba Nogueira-Rodríguez, Rubén Domínguez-Carbajales, Fernando Campos-Tato, Jesús Herrero, Manuel Puga, Laura Rivas, Eloy Sánchez, Águeda Iglesias, Laura Codesido, Ástrid Irene Díez-Martín, Pedro Davila-Piñón, Joaquín Cubiella, Florentino Fdez-Riverola, Hugo López-Fernández, Daniel Glez-Peña, Miguel Reboiro-Jato
2024	J	`jnl`	Encouraging Eco-Innovative Urban Development. Algorithms Victor Alves, Florentino Fdez-Riverola, Jorge Ribeiro, José Neves, Henrique Vicente
2023	J	`jnl`	A novel gluten knowledge base of potential biomedical and health-related interactions extracted from the literature: Using machine learning and graph analysis methodologies to reconstruct the bibliome. J. Biomed. Informatics Martín Pérez-Pérez, Tânia Ferreira, Gilberto Igrejas, Florentino Fdez-Riverola
2023	J	`jnl`	Cloud-assisted collaborative inference of convolutional neural networks for vision tasks on resource-constrained devices. Neurocomputing Ivan Rodriguez-Conde, Celso Campos, Florentino Fdez-Riverola
2023	J	`jnl`	Horizontally Distributed Inference of Deep Neural Networks for AI-Enabled IoT. Sensors Ivan Rodriguez-Conde, Celso Campos, Florentino Fdez-Riverola
2023	Misc	`ed.`	Practical Applications of Computational Biology and Bioinformatics, 16th International Conference (PACBB 2022), 13-15 July, 2022, L'Aquila, Italy. PACBB Florentino Fdez-Riverola, Miguel Rocha, Mohd Saberi Mohamad, Simona Caraiman, Ana Belén Gil González
2023	Misc	`ed.`	Practical Applications of Computational Biology and Bioinformatics, 17th International Conference (PACBB 2023), 12th-14th July, 2023, Guimarães, Portugal PACBB Miguel Rocha, Florentino Fdez-Riverola, Mohd Saberi Mohamad, Ana Belén Gil González
2022	J	`jnl`	A deep learning relation extraction approach to support a biomedical semi-automatic curation task: The case of the gluten bibliome. Expert Syst. Appl. Martín Pérez-Pérez, Tânia Ferreira, Gilberto Igrejas, Florentino Fdez-Riverola
2022	—	`conf`	An Entropic Approach to Technology Enable Learning and Social Computing. MLIS Victor Alves, José Miranda, Hossam Dawa, Filipe Fernandes, Fernanda Pombal, Jorge Ribeiro, Florentino Fdez-Riverola, Cesar Analide, Henrique Vicente, José Neves
2022	J	`jnl`	Boosting biomedical document classification through the use of domain entity recognizers and semantic ontologies for document representation: The case of gluten bibliome. Neurocomputing Martín Pérez-Pérez, Tânia Ferreira, Anália Lourenço, Gilberto Igrejas, Florentino Fdez-Riverola
2022	J	`jnl`	Optimized convolutional neural network architectures for efficient on-device vision-based object detection. Neural Comput. Appl. Ivan Rodriguez-Conde, Celso Campos, Florentino Fdez-Riverola
2022	Misc	`ed.`	Practical Applications of Computational Biology & Bioinformatics, 15th International Conference (PACBB 2021), Salamanca, Spain, 6-8 October, 2021. PACBB Miguel Rocha, Florentino Fdez-Riverola, Mohd Saberi Mohamad, Roberto Casado-Vara
2022	J	`jnl`	Real-time polyp detection model using convolutional neural networks. Neural Comput. Appl. Alba Nogueira-Rodríguez, Rubén Domínguez-Carbajales, Fernando Campos-Tato, Jesús Herrero, Manuel Puga, David Remedios, Laura Rivas, Eloy Sánchez, Águeda Iglesias, Joaquín Cubiella, Florentino Fdez-Riverola, Hugo López-Fernández, Miguel Reboiro-Jato, Daniel Glez-Peña
2022	J	`jnl`	SEDA: A Desktop Tool Suite for FASTA Files Processing. IEEE ACM Trans. Comput. Biol. Bioinform. Hugo López-Fernández, Pedro Duque, Noé Vázquez, Florentino Fdez-Riverola, Miguel Reboiro-Jato, Cristina P. Vieira, Jorge Vieira
2021	J	`jnl`	A framework to extract biomedical knowledge from gluten-related tweets: The case of dietary concerns in digital era. Artif. Intell. Medicine Martín Pérez-Pérez, Gilberto Igrejas, Florentino Fdez-Riverola, Anália Lourenço
2021	J	`jnl`	Computational Approach to the Systematic Prediction of Glycolytic Abilities: Looking Into Human Microbiota. IEEE ACM Trans. Comput. Biol. Bioinform. Guillermo Blanco, Borja Sánchez, Lorena Ruiz, Florentino Fdez-Riverola, Abelardo Margolles, Anália Lourenço
2021	J	`jnl`	Deep Neural Networks approaches for detecting and classifying colorectal polyps. Neurocomputing Alba Nogueira-Rodríguez, Rubén Domínguez-Carbajales, Hugo López-Fernández, Águeda Iglesias, Joaquín Cubiella, Florentino Fdez-Riverola, Miguel Reboiro-Jato, Daniel Glez-Peña
2021	J	`jnl`	HaemoKBS: A knowledge-based system for real-time, continuous categorisation of adverse reactions in blood recipients. Neurocomputing Augusto Ramoa, Jorge Condeço, Florentino Fdez-Riverola, Anália Lourenço
2021	Misc	`ed.`	Practical Applications of Computational Biology & Bioinformatics, 14th International Conference (PACBB 2020), L'Aquila, Italy, 17-19 June, 2020. PACBB Gabriella Panuccio, Miguel Rocha, Florentino Fdez-Riverola, Mohd Saberi Mohamad, Roberto Casado-Vara
2020	Misc	`conf`	A Health-Related Study from Food Online Reviews. The Case of Gluten-Free Foods. PACBB Martín Pérez-Pérez, Anália Lourenço, Gilberto Igrejas, Florentino Fdez-Riverola
2020	—	`conf`	A Multi-valued Logic Assessment of Organizational Performance via Workforce Social Networking. BDTA/WiCON José Neves, Florentino Fdez-Riverola, Victor Alves, Filipa Ferraz, Lia Sousa, António Costa, Jorge Ribeiro, Henrique Vicente
2020	Misc	`conf`	Inferences on Mycobacterium Leprae Host Immune Response Escape and Antibiotic Resistance Using Genomic Data and GenomeFastScreen. PACBB Hugo López-Fernández, Cristina P. Vieira, Florentino Fdez-Riverola, Miguel Reboiro-Jato, Jorge Vieira
2020	J	`jnl`	Mining the sociome for Health Informatics: Analysis of therapeutic lifestyle adherence of diabetic patients in Twitter. Future Gener. Comput. Syst. Gael Pérez Rodríguez, Martín Pérez-Pérez, Florentino Fdez-Riverola, Anália Lourenço
2020	Misc	`ed.`	Practical Applications of Computational Biology and Bioinformatics, 13th International Conference, PABCC 2019, Avila, Spain, 26-28 June 2019. PACBB Florentino Fdez-Riverola, Miguel Rocha, Mohd Saberi Mohamad, Nazar Zaki, José A. Castellanos-Garzón
2020	Misc	`conf`	The Activity of Bioinformatics Developers and Users in Stack Overflow. PACBB Roi Pérez-López, Guillermo Blanco, Florentino Fdez-Riverola, Anália Lourenço
2020	J	`jnl`	Understanding the social evolution of the Java community in Stack Overflow: A 10-year study of developer interactions. Future Gener. Comput. Syst. Guillermo Blanco, Roi Pérez-López, Florentino Fdez-Riverola, Anália Lourenço
2019	J	`jnl`	Application of agent-based modelling to assess single-molecule transport across the cell envelope of Comput. Biol. Medicine Paulo Maia, Gael Pérez Rodríguez, Martín Pérez-Pérez, Florentino Fdez-Riverola, Anália Lourenço, Nuno F. Azevedo
2019	J	`jnl`	Computational prediction of the bioactivity potential of proteomes based on expert knowledge. J. Biomed. Informatics Aitor Blanco-Míguez, Guillermo Blanco, Alberto Gutiérrez-Jácome, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
2019	J	`jnl`	DEWE: A novel tool for executing differential expression RNA-Seq workflows in biomedical research. Comput. Biol. Medicine Hugo López-Fernández, Aitor Blanco-Míguez, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
2019	Misc	`conf`	Inferring Positive Selection in Large Viral Datasets. PACBB Hugo López-Fernández, Pedro Duque, Noé Vázquez, Florentino Fdez-Riverola, Miguel Reboiro-Jato, Cristina P. Vieira, Jorge Vieira
2019	J	`jnl`	Next generation community assessment of biomedical entity recognition web servers: metrics, performance, interoperability aspects of BeCalm. J. Cheminformatics Martín Pérez-Pérez, Gael Pérez Rodríguez, Aitor Blanco-Míguez, Florentino Fdez-Riverola, Alfonso Valencia, Martin Krallinger, Anália Lourenço
2019	J	`jnl`	Online visibility of software-related web sites: The case of biomedical text mining tools. Inf. Process. Manag. Gael Pérez Rodríguez, Martín Pérez-Pérez, Florentino Fdez-Riverola, Anália Lourenço
2019	Misc	`ed.`	Practical Applications of Computational Biology and Bioinformatics, 12th International Conference, PACBB 2018, Toledo, Spain, 20-22 May, 2018. PACBB Florentino Fdez-Riverola, Mohd Saberi Mohamad, Miguel Rocha, Juan F. De Paz, Pascual González
2019	Misc	`conf`	Proposal of a New Bioinformatics Pipeline for Metataxonomics in Precision Medicine. PACBB Osvaldo Graña-Castro, Hugo López-Fernández, Florentino Fdez-Riverola, Fátima Al-Shahrour, Daniel Glez-Peña
2019	J	`jnl`	Resources and tools for the high-throughput, multi-omic study of intestinal microbiota. Briefings Bioinform. Aitor Blanco-Míguez, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
2019	J	`jnl`	Selected Extended Papers of the 12th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB). J. Integr. Bioinform. Florentino Fdez-Riverola, Miguel Rocha
2018	Misc	`conf`	A Bioinformatics Protocol for Quickly Creating Large-Scale Phylogenetic Trees. PACBB Hugo López-Fernández, Pedro Duque, Sílvia Henriques, Noé Vázquez, Florentino Fdez-Riverola, Cristina P. Vieira, Miguel Reboiro-Jato, Jorge Vieira
2018	J	`jnl`	Active and Assisted Living Ecosystem for the Elderly. Sensors Isabel Marcelino, Rosalía Laza, Patrício Domingues, Silvana Gómez-Meire, Florentino Fdez-Riverola, António Pereira
2018	J	`jnl`	Bicycle: a bioinformatics pipeline to analyze bisulfite sequencing data. Bioinform. Osvaldo Graña, Hugo López-Fernández, Florentino Fdez-Riverola, David G. Pisano, Daniel Glez-Peña
2018	J	`jnl`	Concept drift in e-mail datasets: An empirical study with practical implications. Inf. Sci. David Ruano-Ordás, Florentino Fdez-Riverola, José Ramón Méndez
2018	Misc	`conf`	EvoPPI: A Web Application to Compare Protein-Protein Interactions (PPIs) from Different Databases and Species. PACBB Noé Vázquez, Sara Rocha, Hugo López-Fernández, André Torres, Rui Camacho, Florentino Fdez-Riverola, Jorge Vieira, Cristina P. Vieira, Miguel Reboiro-Jato
2018	J	`jnl`	Perceptions of the use of intelligent information access systems in university level active learning activities among teachers of biomedical subjects. Int. J. Medical Informatics Fernando Aparicio, Maria de la Luz Morales-Botello, Margarita Rubio, Asunción Hernando, Rafael Muñoz, Hugo López-Fernández, Daniel Glez-Peña, Florentino Fdez-Riverola, Manuel de la Villa, Manuel J. Maña López, Diego Gachet, Manuel de Buenaga Rodríguez
2018	J	`jnl`	S2P: A software tool to quickly carry out reproducible biomedical research projects involving 2D-gel and MALDI-TOF MS protein data. Comput. Methods Programs Biomed. Hugo López-Fernández, Jose E. Araújo, Susana Jorge, Daniel Glez-Peña, Miguel Reboiro-Jato, Hugo Miguel Santos, Florentino Fdez-Riverola, José L. Capelo
2018	J	`jnl`	Using evolutionary computation for discovering spam patterns from e-mail samples. Inf. Process. Manag. David Ruano-Ordás, Florentino Fdez-Riverola, José Ramón Méndez
2018	J	`jnl`	WARCProcessor: An Integrative Tool for Building and Management of Web Spam Corpora. Sensors Miguel Callón, Jorge Fdez-Glez, David Ruano-Ordás, Rosalía Laza, Reyes Pavón, Florentino Fdez-Riverola, José Ramón Méndez
2017	Misc	`ed.`	11th International Conference on Practical Applications of Computational Biology & Bioinformatics, PACBB 2017, Porto, Portugal, 21-23 June, 2017 PACBB Florentino Fdez-Riverola, Mohd Saberi Mohamad, Miguel P. Rocha, Juan F. De Paz, Tiago Pinto
2017	Misc	`conf`	Automated Collection and Sharing of Adaptive Amino Acid Changes Data. PACBB Noé Vázquez, Cristina P. Vieira, Bárbara S. R. Amorim, André Torres, Hugo López-Fernández, Florentino Fdez-Riverola, José L. R. Sousa, Miguel Reboiro-Jato, Jorge Vieira
2017	J	`jnl`	Collaborative relation annotation and quality analysis in Markyt environment. Database J. Biol. Databases Curation Martín Pérez-Pérez, Gael Pérez Rodríguez, Florentino Fdez-Riverola, Anália Lourenço
2017	J	`jnl`	Corrigendum to "A spam filtering multi-objective optimization study covering parsimony maximization and three-way classification" [Applied Soft Computing Volume 48 (2016) 111-123]. Appl. Soft Comput. Vitor Basto-Fernandes, Iryna Yevseyeva, José Ramón Méndez, Jiaqi Zhao, Florentino Fdez-Riverola, Michael T. M. Emmerich
2017	J	`jnl`	MAHMI database: a comprehensive MetaHit-based resource for the study of the mechanism of action of the human microbiota. Database J. Biol. Databases Curation Aitor Blanco-Míguez, Alberto Gutiérrez-Jácome, Florentino Fdez-Riverola, Anália Lourenço, Borja Sánchez
2017	J	`jnl`	P4P: a peptidome-based strain-level genome comparison web tool. Nucleic Acids Res. Aitor Blanco-Míguez, Florentino Fdez-Riverola, Anália Lourenço, Borja Sánchez
2017	J	`jnl`	RUbioSeq+: A multiplatform application that executes parallelized pipelines to analyse next-generation sequencing data. Comput. Methods Programs Biomed. Miriam Rubio-Camarillo, Hugo López-Fernández, Gonzalo Gómez-López, Angel Carro, José María Fernández, Coral Fustero Torre, Florentino Fdez-Riverola, Daniel Glez-Peña
2017	Misc	`conf`	S2P: A Desktop Application for Fast and Easy Processing of 2D-Gel and MALDI-Based Mass Spectrometry Protein Data. PACBB Hugo López-Fernández, Jose E. Araújo, Daniel Glez-Peña, Miguel Reboiro-Jato, Florentino Fdez-Riverola, José Luis Capelo-Martínez
2017	J	`jnl`	Selected Extended Papers of the 11th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB). J. Integr. Bioinform. Florentino Fdez-Riverola, Miguel Rocha
2016	Misc	`ed.`	10th International Conference on Practical Applications of Computational Biology & Bioinformatics, PACBB 2016, Sevilla, Spain, 1-3 June 2016 PACBB Mohd Saberi Mohamad, Miguel P. Rocha, Florentino Fdez-Riverola, Francisco José Domínguez Mayo, Juan F. De Paz
2016	J	`jnl`	A spam filtering multi-objective optimization study covering parsimony maximization and three-way classification. Appl. Soft Comput. Vitor Basto-Fernandes, Iryna Yevseyeva, José Ramón Méndez, Jiaqi Zhao, Florentino Fdez-Riverola, Michael T. M. Emmerich
2016	J	`jnl`	BIOMedical Search Engine Framework: Lightweight and customized implementation of domain-specific biomedical search engines. Comput. Methods Programs Biomed. Alberto G. Jácome, Florentino Fdez-Riverola, Anália Lourenço
2016	J	`jnl`	Boosting Accuracy of Classical Machine Learning Antispam Classifiers in Real Scenarios by Applying Rough Set Theory. Sci. Program. Noemí Pérez-Díaz, David Ruano-Ordás, Florentino Fdez-Riverola, José Ramón Méndez
2016	J	`jnl`	Construction of antimicrobial peptide-drug combination networks from scientific literature based on a semi-automated curation workflow. Database J. Biol. Databases Curation Paula Jorge, Martín Pérez-Pérez, Gael Pérez Rodríguez, Florentino Fdez-Riverola, Maria Olívia Pereira, Anália Lourenço
2016	J	`jnl`	Improving Phylogeny Reconstruction at the Strain Level Using Peptidome Datasets. PLoS Comput. Biol. Aitor Blanco-Míguez, Jan P. Meier-Kolthoff, Alberto Gutiérrez-Jácome, Markus Göker, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
2016	J	`jnl`	LA-iMageS: a software for elemental distribution bioimaging using LA-ICP-MS data. J. Cheminformatics Hugo López-Fernández, Gustavo de S. Pessôa, Marco A. Z. Arruda, José Luis Capelo-Martínez, Florentino Fdez-Riverola, Daniel Glez-Peña, Miguel Reboiro-Jato
2016	Misc	`conf`	RUbioSeq+: An Application that Executes Parallelized Pipelines to Analyse Next-Generation Sequencing Data. PACBB Miriam Rubio-Camarillo, Hugo López-Fernández, Gonzalo Gómez-López, Angel Carro, José María Fernández, Florentino Fdez-Riverola, Daniel Glez-Peña, David G. Pisano
2016	J	`jnl`	RuleSIM: a toolkit for simulating the operation and improving throughput of rule-based spam filters. Softw. Pract. Exp. David Ruano-Ordás, Jorge Fdez-Glez, Florentino Fdez-Riverola, Vitor Basto-Fernandes, José Ramón Méndez
2016	J	`jnl`	The Markyt visualisation, prediction and benchmark platform for chemical and gene entity recognition at BioCreative/CHEMDNER challenge. Database J. Biol. Databases Curation Martín Pérez-Pérez, Gael Pérez Rodríguez, Obdulia Rabal, Miguel Vazquez, Julen Oyarzabal, Florentino Fdez-Riverola, Alfonso Valencia, Martin Krallinger, Anália Lourenço
2016	J	`jnl`	Using new scheduling heuristics based on resource consumption information for increasing throughput on rule-based spam filtering systems. Softw. Pract. Exp. David Ruano-Ordás, Jorge Fdez-Glez, Florentino Fdez-Riverola, José Ramón Méndez
2016	J	`jnl`	WSF2: A Novel Framework for Filtering Web Spam. Sci. Program. Jorge Fdez-Glez, David Ruano-Ordás, Rosalía Laza, José Ramón Méndez, Reyes Pavón, Florentino Fdez-Riverola
2015	Misc	`ed.`	9th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2015, 3-5 June, 2015, Salamanca, Spain. PACBB Ross A. Overbeek, Miguel P. Rocha, Florentino Fdez-Riverola, Juan Francisco de Paz
2015	Misc	`conf`	A New Bioinformatic Pipeline to Address the Most Common Requirements in RNA-seq Data Analysis. PACBB Osvaldo Graña, Miriam Rubio-Camarillo, Florentino Fdez-Riverola, David G. Pisano, Daniel Glez-Peña
2015	Misc	`conf`	A Novel Search Engine Supporting Specific Drug Queries and Literature Management. PACBB Alberto G. Jácome, Florentino Fdez-Riverola, Anália Lourenço
2015	J	`jnl`	A dynamic model for integrating simple web spam classification techniques. Expert Syst. Appl. Jorge Fdez-Glez, David Ruano-Ordás, José Ramón Méndez, Florentino Fdez-Riverola, Rosalía Laza, Reyes Pavón
2015	Misc	`conf`	Analyzing the Impact of Unbalanced Data on Web Spam Classification. DCAI Jorge Fdez-Glez, David Ruano-Ordás, Florentino Fdez-Riverola, José Ramón Méndez, Reyes Pavón, Rosalía Laza
2015	Misc	`conf`	Combining Scheduling Heuristics to Improve e-mail Filtering Throughput. DCAI David Ruano-Ordás, Jorge Fdez-Glez, Florentino Fdez-Riverola, José Ramón Méndez
2015	J	`jnl`	Enabling systematic, harmonised and large-scale biofilms data computation: The Biofilms Experiment Workbench. Comput. Methods Programs Biomed. Gael Pérez Rodríguez, Daniel Glez-Peña, Nuno F. Azevedo, Maria Olívia Pereira, Florentino Fdez-Riverola, Anália Lourenço
2015	J	`jnl`	Marky: A tool supporting annotation consistency in multi-user and iterative document annotation projects. Comput. Methods Programs Biomed. Martín Pérez-Pérez, Daniel Glez-Peña, Florentino Fdez-Riverola, Anália Lourenço
2015	J	`jnl`	Mass-Up: an all-in-one open software application for MALDI-TOF mass spectrometry knowledge discovery. BMC Bioinform. Hugo López-Fernández, Hugo Miguel Santos, José L. Capelo, Florentino Fdez-Riverola, Daniel Glez-Peña, Miguel Reboiro-Jato
2015	—	`conf`	Mental Workload Management as a Tool in e-Learning Scenarios. PECCS André Pimenta, Sérgio Gonçalves, Davide Carneiro, Florentino Fdez-Riverola, José Neves, Paulo Novais
2015	—	`conf`	Quadcriteria Optimization of Binary Classifiers: Error Rates, Coverage, and Complexity. EVOLVE Vitor Basto-Fernandes, Iryna Yevseyeva, David Ruano-Ordás, Jiaqi Zhao, Florentino Fdez-Riverola, José Ramón Méndez, Michael T. M. Emmerich
2015	J	`jnl`	Removing Barriers to Promote Social Computing among Senior Population. Int. J. Distributed Sens. Networks Isabel Marcelino, Rosalía Laza, Florentino Fdez-Riverola, António Pereira
2015	J	`jnl`	Wireless Body Area Networks for Healthcare Applications: Protocol Stack Review. Int. J. Distributed Sens. Networks Luis Filipe, Florentino Fdez-Riverola, Nuno Costa, António Pereira
2014	Misc	`ed.`	8th International Conference on Practical Applications of Computational Biology & Bioinformatics, PACBB 2014, 4-6 June, 2014, Salamanca, Spain PACBB Julio Saez-Rodriguez, Miguel P. Rocha, Florentino Fdez-Riverola, Juan F. De Paz Santana
2014	J	`jnl`	A Mobile Virtual Butler to Bridge the Gap between Users and Ambient Assisted Living: A Smart Home Case Study. Sensors Nuno Costa, Patrício Domingues, Florentino Fdez-Riverola, António Pereira
2014	J	`jnl`	A Ubiquitous and Low-Cost Solution for Movement Monitoring and Accident Detection Based on Sensor Fusion. Sensors Filipe Felisberto, Florentino Fdez-Riverola, António Pereira
2014	J	`jnl`	A novel ensemble of classifiers that use biological relevant gene sets for microarray classification. Appl. Soft Comput. Miguel Reboiro-Jato, Fernando Díaz, Daniel Glez-Peña, Florentino Fdez-Riverola
2014	Misc	`conf`	BEW: Bioinformatics Workbench for Analysis of Biofilms Experimental Data. PACBB Gael Pérez Rodríguez, Daniel Glez-Peña, Nuno F. Azevedo, Maria Olívia Pereira, Florentino Fdez-Riverola, Anália Lourenço
2014	Misc	`conf`	Marky: A Lightweight Web Tracking Tool for Document Annotation. PACBB Martín Pérez-Pérez, Daniel Glez-Peña, Florentino Fdez-Riverola, Anália Lourenço
2014	J	`jnl`	Web scraping technologies in an API world. Briefings Bioinform. Daniel Glez-Peña, Anália Lourenço, Hugo López-Fernández, Miguel Reboiro-Jato, Florentino Fdez-Riverola
2014	J	`jnl`	geneCommittee: a web-based tool for extensively testing the discriminatory power of biologically relevant gene sets in microarray data classification. BMC Bioinform. Miguel Reboiro-Jato, Joel Arrais, José Luís Oliveira, Florentino Fdez-Riverola
2013	Misc	`ed.`	7th International Conference on Practical Applications of Computational Biology & Bioinformatics, PACBB 2013, 22-14 May, 2013, Salamanca, Spain PACBB Mohd Saberi Mohamad, Loris Nanni, Miguel P. Rocha, Florentino Fdez-Riverola
2013	Misc	`conf`	A Workflow for the Application of Biclustering to Mass Spectrometry Data. PACBB Hugo López-Fernández, Miguel Reboiro-Jato, Sara C. Madeira, Rubén López-Cortés, J. D. Nunes-Miranda, Hugo Miguel Santos, Florentino Fdez-Riverola, Daniel Glez-Peña
2013	J	`jnl`	A hybrid artificial intelligence model for river flow forecasting. Appl. Soft Comput. Carlos H. Fajardo Toro, Silvana Gómez-Meire, Juan F. Gálvez, Florentino Fdez-Riverola
2013	J	`jnl`	BioAnnote: A software platform for annotating biomedical documents with application in medical learning environments. Comput. Methods Programs Biomed. Hugo López-Fernández, Miguel Reboiro-Jato, Daniel Glez-Peña, Fernando Aparicio, Diego Gachet, Manuel Buenaga, Florentino Fdez-Riverola
2013	J	`jnl`	Effective scheduling strategies for boosting performance on rule-based spam filtering frameworks. J. Syst. Softw. David Ruano-Ordás, Jorge Fdez-Glez, Florentino Fdez-Riverola, José Ramón Méndez
2013	J	`jnl`	Wirebrush4SPAM: a novel framework for improving efficiency on spam filtering services. Softw. Pract. Exp. Noemí Pérez-Díaz, David Ruano-Ordás, Florentino Fdez-Riverola, José Ramón Méndez
2013	J	`jnl`	genEnsemble: A new model for the combination of classifiers and integration of biological knowledge applied to genomic data. Expert Syst. Appl. Miguel Reboiro-Jato, Rosalía Laza, Hugo López-Fernández, Daniel Glez-Peña, Fernando Díaz, Florentino Fdez-Riverola
2012	Misc	`ed.`	6th International Conference on Practical Applications of Computational Biology & Bioinformatics, Salamanca, Spain PACBB Miguel P. Rocha, Nicholas M. Luscombe, Florentino Fdez-Riverola, Juan M. Corchado Rodríguez
2012	J	`jnl`	A JAVA application framework for scientific software development. Softw. Pract. Exp. Florentino Fdez-Riverola, Daniel Glez-Peña, Hugo López-Fernández, Miguel Reboiro-Jato, José Ramón Méndez
2012	J	`jnl`	A novel ensemble approach for multicategory classification of DNA microarray data using biological relevant gene sets. Int. J. Data Min. Bioinform. Miguel Reboiro-Jato, Daniel Glez-Peña, Fernando Díaz, Florentino Fdez-Riverola
2012	J	`jnl`	ADOPS - Automatic Detection Of Positively Selected Sites. J. Integr. Bioinform. David Reboiro-Jato, Miguel Reboiro-Jato, Florentino Fdez-Riverola, Cristina P. Vieira, Nuno A. Fonseca, Jorge Vieira
2012	Misc	`conf`	Applying AIBench Framework to Develop Rich User Interfaces in NGS Studies. PACBB Hugo López-Fernández, Daniel Glez-Peña, Miguel Reboiro-Jato, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola
2012	Misc	`conf`	Biological Knowledge Integration in DNA Microarray Gene Expression Classification Based on Rough Set Theory. PACBB Diego Calvo-Dmgz, Juan F. Gálvez, Daniel Glez-Peña, Florentino Fdez-Riverola
2012	—	`conf`	Developing Anti-spam Filters Using Automatically Generated Rough Sets Rules. IS-MiS Noemí Pérez-Díaz, David Ruano-Ordás, Florentino Fdez-Riverola, José Ramón Méndez
2012	J	`jnl`	Grindstone4Spam: An optimization toolkit for boosting e-mail classification. J. Syst. Softw. José Ramón Méndez, Miguel Reboiro-Jato, Fernando Díaz, Eduardo Díaz, Florentino Fdez-Riverola
2012	Misc	`conf`	On the Development of a Pipeline for the Automatic Detection of Positively Selected Sites. PACBB David Reboiro-Jato, Miguel Reboiro-Jato, Florentino Fdez-Riverola, Nuno A. Fonseca, Jorge Vieira
2012	J	`jnl`	Rough sets for spam filtering: Selecting appropriate decision rules for boundary e-mail classification. Appl. Soft Comput. Noemí Pérez-Díaz, David Ruano-Ordás, José Ramón Méndez, Juan F. Gálvez, Florentino Fdez-Riverola
2012	J	`jnl`	SDAI: An integral evaluation methodology for content-based spam filtering models. Expert Syst. Appl. Noemí Pérez-Díaz, David Ruano-Ordás, Florentino Fdez-Riverola, José Ramón Méndez
2012	J	`jnl`	Unobstructive Body Area Networks (BAN) for Efficient Movement Monitoring. Sensors Filipe Felisberto, Nuno Costa, Florentino Fdez-Riverola, António Pereira
2012	J	`jnl`	Using Variable Precision Rough Set for Selection and Classification of Biological Knowledge Integrated in DNA Gene Expression. J. Integr. Bioinform. Diego Calvo-Dmgz, Juan F. Gálvez, Daniel Glez-Peña, Silvana Gómez-Meire, Florentino Fdez-Riverola
2011	Misc	`ed.`	5th International Conference on Practical Applications of Computational Biology & Bioinformatics, PACBB 2011, April 6-8, 2011, Salamanca, Spain PACBB Miguel P. Rocha, Juan M. Corchado Rodríguez, Florentino Fdez-Riverola, Alfonso Valencia
2011	Misc	`conf`	An Intuitive Workflow to Retrieve Somatic Mutations in Next Generation Sequencing Studies. PACBB Daniel Glez-Peña, Miguel Reboiro-Jato, Florentino Fdez-Riverola, David G. Pisano, Gonzalo Gómez-López
2011	—	`conf`	Application of Statistical Methods to Improve an Acceleration Based Algorithm. CENTERIS (3) Filipe Felisberto, Miguel Felgueiras, Alexandra Seco, Florentino Fdez-Riverola, António Pereira
2011	Misc	`conf`	Assessing the Impact of Class-Imbalanced Data for Classifying Relevant/Irrelevant Medline Documents. PACBB Reyes Pavón, Rosalía Laza, Miguel Reboiro-Jato, Florentino Fdez-Riverola
2011	Misc	`conf`	Assessing the Suitability of MeSH Ontology for Classifying Medline Documents. PACBB Rosalía Laza, Reyes Pavón, Miguel Reboiro-Jato, Florentino Fdez-Riverola
2011	Misc	`conf`	Building Proteomics Applications with the AIBench Application Framework. PACBB Miguel Reboiro-Jato, Daniel Glez-Peña, José Ramón Méndez Reboredo, Hugo Miguel Santos, Ricardo Jorge Carreira, José L. Capelo, Florentino Fdez-Riverola
2011	Misc	`conf`	Building a GATK-Based Tool for Methylation Analysis in Next-Generation Bisulfite Sequencing Experiments. PACBB Daniel Glez-Peña, Osvaldo Graña, Florentino Fdez-Riverola, David G. Pisano
2011	—	`conf`	Elder Care Alert Management - Decision Support by a Logistic Regression Model. PAAMS (Workshops) Alexandra Seco, Miguel Felgueiras, Florentino Fdez-Riverola, António Pereira
2011	—	`conf`	Elder Care's Fall Detection System. ISAmI Filipe Felisberto, Nuno Moreira, Isabel Marcelino, Florentino Fdez-Riverola, António Pereira
2011	J	`jnl`	Evaluating the effect of unbalanced data in biomedical document classification. J. Integr. Bioinform. Rosalía Laza, Reyes Pavón, Miguel Reboiro-Jato, Florentino Fdez-Riverola
2011	—	`conf`	Improving the Elder Care's Wireless Sensor Network Fall Detection System Using Logistic Regression. CENTERIS (3) Filipe Felisberto, Miguel Felgueiras, Patrício Domingues, Florentino Fdez-Riverola, António Pereira
2011	—	`conf`	Medical-Miner at TREC 2011 Medical Records Track. TREC Juan Manuel Córdoba, Manuel J. Maña López, Noa P. Cruz Díaz, Jacinto Mata, Fernando Aparicio, Manuel de Buenaga Rodríguez, Daniel Glez-Peña, Florentino Fdez-Riverola
2011	J	`jnl`	PileLine: a toolbox to handle genome position information in next-generation sequencing studies. BMC Bioinform. Daniel Glez-Peña, Gonzalo Gómez-López, Miguel Reboiro-Jato, Florentino Fdez-Riverola, David G. Pisano
2011	J	`jnl`	PileLineGUI: a desktop environment for handling genome position files in next-generation sequencing studies. Nucleic Acids Res. Hugo López-Fernández, Daniel Glez-Peña, Miguel Reboiro-Jato, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola
2011	J	`jnl`	Rapid development of proteomic applications with the AIBench framework. J. Integr. Bioinform. Hugo López-Fernández, Miguel Reboiro-Jato, Daniel Glez-Peña, José Ramón Méndez Reboredo, Hugo Miguel Santos, Ricardo Jorge Carreira, José Luis Capelo-Martínez, Florentino Fdez-Riverola
2011	J	`jnl`	Using inductive learning to assess compound feed production in cooperative poultry farms. Expert Syst. Appl. Miguel Reboiro-Jato, Julia Glez-Dopazo, D. Glez, Rosalía Laza, Juan F. Gálvez, Reyes Pavón, Daniel Glez-Peña, Florentino Fdez-Riverola
2010	—	`conf`	A Comparative Study of Microarray Data Classification Methods Based on Ensemble Biological Relevant Gene Sets. IWPACBB Miguel Reboiro-Jato, Daniel Glez-Peña, Juan F. Gálvez, Rosalía Laza, Fernando Díaz, Florentino Fdez-Riverola
2010	J	`jnl`	A robust algorithm for forming note complexes. Inteligencia Artif. Silvana Gómez-Meire, Miguel Reboiro-Jato, Carlos H. Fajardo Toro, David N. Olivieri, Florentino Fdez-Riverola
2010	J	`jnl`	AIBench: A rapid application development framework for translational research in biomedicine. Comput. Methods Programs Biomed. Daniel Glez-Peña, Miguel Reboiro-Jato, Paulo Maia, Miguel Rocha, Fernando Díaz, Florentino Fdez-Riverola
2010	J	`jnl`	ALTER: program-oriented conversion of DNA and protein alignments. Nucleic Acids Res. Daniel Glez-Peña, Daniel Gómez-Blanco, Miguel Reboiro-Jato, Florentino Fdez-Riverola, David Posada
2010	—	`conf`	An Experimental Evaluation of a Novel Stochastic Method for Iterative Class Discovery on Real Microarray Datasets. IWPACBB Héctor Gómez, Daniel Glez-Peña, Miguel Reboiro-Jato, Reyes Pavón, Fernando Díaz, Florentino Fdez-Riverola
2010	J	`jnl`	BioDR: Semantic indexing networks for biomedical document retrieval. Expert Syst. Appl. Anália Lourenço, Rafael Carreira, Daniel Glez-Peña, José Ramón Méndez, Sónia Carneiro, Luis Mateus Rocha, Fernando Díaz, Eugénio C. Ferreira, Isabel Rocha, Florentino Fdez-Riverola, Miguel Rocha
2010	C	`conf`	Incorporating biological knowledge to microarray data classification through genomic data fusion. FUSION Daniel Glez-Peña, Marta Pérez-Fernández, Miguel Reboiro-Jato, Florentino Fdez-Riverola, Marta Pérez, Fernando Díaz
2010	J	`jnl`	Medical-Miner: Integración de conocimiento textual explícito en técnicas de minería de datos para la creación de herramientas traslacionales en medicina. Proces. del Leng. Natural Manuel de Buenaga Rodríguez, Florentino Fdez-Riverola, Manuel J. Maña López, Enrique Puertas Sanz, Daniel Glez-Peña, Jacinto Mata
2010	—	`conf`	Multi-agent System for Mass Spectrometry Analysis. PAAMS (Special Sessions and Workshops) Miguel Reboiro-Jato, Daniel Glez-Peña, Hugo Miguel Santos, Mário S. Diniz, Carlos Lodeiro, José L. Capelo, Florentino Fdez-Riverola
2010	—	`conf`	PathAgent: Multi-agent System for Updated Pathway Information Integration. PAAMS (Special Sessions and Workshops) Miguel Reboiro-Jato, Daniel Glez-Peña, Rubén Domínguez, Gonzalo Gómez-López, David G. Pisano, Celso Campos, Florentino Fdez-Riverola
2010	J	`jnl`	PathJam: a new service for integrating biological pathway information. J. Integr. Bioinform. Daniel Glez-Peña, Miguel Reboiro-Jato, Rubén Domínguez, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola
2009	J	`jnl`	@Note: A workbench for Biomedical Text Mining. J. Biomed. Informatics Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha
2009	—	`conf`	An Evolutionary Approach for Sample-Based Clustering on Microarray Data. IWANN (2) Daniel Glez-Peña, Fernando Díaz, José Ramón Méndez, Juan M. Corchado, Florentino Fdez-Riverola
2009	—	`conf`	Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing. IWANN (2) Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira, Rafael Carreira, Luis M. Rocha, Daniel Glez-Peña, José Ramón Méndez, Florentino Fdez-Riverola, Fernando Díaz, Isabel Rocha, Miguel Rocha
2009	—	`conf`	Current Efforts to Integrate Biological Pathway Information. IWANN (2) Daniel Glez-Peña, Rubén Domínguez, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola
2009	J	`jnl`	DFP: a Bioconductor package for fuzzy profile identification and gene reduction of microarray data. BMC Bioinform. Daniel Glez-Peña, Rodrigo Álvarez, Fernando Díaz, Florentino Fdez-Riverola
2009	—	`ch.`	Fuzzy Patterns and GCS Networks to Clustering Gene Expression Data. Fuzzy Systems in Bioinformatics and Computational Biology Daniel Glez-Peña, Fernando Díaz, Florentino Fdez-Riverola, José Ramón Méndez, Juan M. Corchado
2009	J	`jnl`	Managing irrelevant knowledge in CBR models for unsolicited e-mail classification. Expert Syst. Appl. José Ramón Méndez, Daniel Glez-Peña, Florentino Fdez-Riverola, Fernando Díaz, Juan M. Corchado
2009	J	`jnl`	WhichGenes: a web-based tool for gathering, building, storing and exporting gene sets with application in gene set enrichment analysis. Nucleic Acids Res. Daniel Glez-Peña, Gonzalo Gómez-López, David G. Pisano, Florentino Fdez-Riverola
2009	J	`jnl`	geneCBR: a translational tool for multiple-microarray analysis and integrative information retrieval for aiding diagnosis in cancer research. BMC Bioinform. Daniel Glez-Peña, Fernando Díaz, Jesús M. Hernández, Juan M. Corchado, Florentino Fdez-Riverola
2009	Misc	`conf`	geneSetFinder: A Multiagent Architecture for Gathering Biological Information. PAAMS Daniel Glez-Peña, Julia Glez-Dopazo, Reyes Pavón, Rosalía Laza, Florentino Fdez-Riverola
2008	A*	`conf`	A Comparative Impact Study of Attribute Selection Techniques on Naïve Bayes Spam Filters. ICDM José Ramón Méndez, I. Cid, Daniel Glez-Peña, Miguel Rocha, Florentino Fdez-Riverola
2008	C	`conf`	A framework for the development of Biomedical Text Mining software tools. BIBE Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha
2008	C	`conf`	Integrating Heterogeneous Data and Applications with Distributed-AIBENCH. HIS Julia Glez-Dopazo, Daniel Glez-Peña, Florentino Fdez-Riverola
2008	A*	`conf`	The Impact of Noise in Spam Filtering: A Case Study. ICDM I. Cid, L. R. Janeiro, José Ramón Méndez, Daniel Glez-Peña, Florentino Fdez-Riverola
2007	A	`conf`	A platform for the selection of genes in DNA microarraydata using evolutionary algorithms. GECCO Miguel Rocha, Rui Mendes, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola
2007	J	`jnl`	Applying lazy learning algorithms to tackle concept drift in spam filtering. Expert Syst. Appl. Florentino Fdez-Riverola, Eva Lorenzo Iglesias, Fernando Díaz, José Ramón Méndez, Juan M. Corchado
2007	C	`conf`	Assessing Classification Accuracy in the Revision Stage of a CBR Spam Filtering System. ICCBR José Ramón Méndez, Carlos González, Daniel Glez-Peña, Florentino Fdez-Riverola, Fernando Díaz, Juan M. Corchado
2007	—	`conf`	Developing New Services for the Automotive Industry using Matrix. WEBIST (1) Silvia Alén, Daniel Glez-Peña, Florentino Fdez-Riverola
2007	J	`jnl`	Intelligent systems for detecting and filtering spam e-mail: a survey. Inteligencia Artif. José Ramón Méndez, Florentino Fdez-Riverola, Fernando Díaz, Juan M. Corchado
2007	—	`conf`	Relaxing Feature Selection in Spam Filtering by Using Case-Based Reasoning Systems. EPIA Workshops José Ramón Méndez, Florentino Fdez-Riverola, Daniel Glez-Peña, Fernando Díaz, Juan M. Corchado
2007	J	`jnl`	SpamHunting: An instance-based reasoning system for spam labelling and filtering. Decis. Support Syst. Florentino Fdez-Riverola, Eva Lorenzo Iglesias, Fernando Díaz, José Ramón Méndez, Juan M. Corchado
2006	A*	`conf`	A Comparative Performance Study of Feature Selection Methods for the Anti-spam Filtering Domain. ICDM José Ramón Méndez, Florentino Fdez-Riverola, Fernando Díaz, Eva Lorenzo Iglesias, Juan M. Corchado
2006	C	`conf`	Applying GCS Networks to Fuzzy Discretized Microarray Data for Tumour Diagnosis. IDEAL Fernando Díaz, Florentino Fdez-Riverola, Daniel Glez-Peña, Juan M. Corchado
2006	C	`conf`	Using Fuzzy Patterns for Gene Selection and Data Reduction on Microarray Data. IDEAL Fernando Díaz, Florentino Fdez-Riverola, Daniel Glez-Peña, Juan M. Corchado
2006	J	`jnl`	gene-CBR: A Case-Based Reasonig Tool for Cancer Diagnosis Using Microarray Data Sets. Comput. Intell. Fernando Díaz, Florentino Fdez-Riverola, Juan M. Corchado
2006	A*	`conf`	http Hunting: An IBR Approach to Filtering Dangerous HTTP Traffic. ICDM Florentino Fdez-Riverola, Lourdes Borrajo, Rosalía Laza, Francisco J. Rodríguez, David Martínez
2005	J	`jnl`	Analyzing the Impact of Corpus Preprocessing on Anti-Spam Filtering Software. Res. Comput. Sci. Eva Lorenzo Iglesias, Fernando Díaz, Florentino Fdez-Riverola, José Ramón Méndez, Juan M. Corchado
2005	C	`conf`	Autonomous Internal Control System for Small to Medium Firms. ICCBR María Lourdes Borrajo Diz, Juan M. Corchado, J. Carlos Yáñez, Florentino Fdez-Riverola, Fernando Díaz
2005	C	`conf`	Improving Gene Selection in Microarray Data Analysis Using Fuzzy Patterns Inside a CBR System. ICCBR Florentino Fdez-Riverola, Fernando Díaz, María Lourdes Borrajo Diz, J. Carlos Yáñez, Juan M. Corchado
2005	—	`conf`	Tokenising, Stemming and Stopword Removal on Anti-spam Filtering Domain. CAEPIA José Ramón Méndez, Eva Lorenzo Iglesias, Florentino Fdez-Riverola, Fernando Díaz, Juan M. Corchado
2004	—	`conf`	Applying Rough Sets Reduction Techniques to the Construction of a Fuzzy Rule Base for Case Based Reasoning. IBERAMIA Florentino Fdez-Riverola, Fernando Díaz, Juan M. Corchado
2004	J	`jnl`	FSfRT: Forecasting System for Red Tides. Appl. Intell. Florentino Fdez-Riverola, Juan M. Corchado
2003	J	`jnl`	FSFRT: Forecasting System for Red Tides. A Hybrid Autonomous AI Model. Appl. Artif. Intell. Florentino Fdez-Riverola, Juan M. Corchado