Florence Tama

15 papers B 4C 1Journal 8Unranked 2
YearRankTypeTitle / Venue / Authors
2026 — conf
xspline3d: A Python Library for MPI-Based Spline Interpolation Enforcing Global Continuity in Distributed 3D Volumes.
SCA/HPC Asia Workshops
Wenyang Zhao, Osamu Miyashita, Florence Tama
2025 — conf
Energy-Efficient Neural Network Training for Scientific Datasets with Advanced Similarity Analytics and Orchestration.
ICCS (1)
Kin Wai Ng, Orcun Yildiz, Tom Peterka, Florence Tama, Osamu Miyashita, Catherine D. Schuman, Michela Taufer
2024 C conf
Xphase3d: Memory-Distributed Phase Retrieval for Reconstructing Large-Scale 3D Density Maps of Biological Macromolecules.
CLUSTER
Wenyang Zhao, Osamu Miyashita, Miki Nakano, Florence Tama
2023 B conf
Composable Workflow for Accelerating Neural Architecture Search Using In Situ Analytics for Protein Classification.
ICPP
Georgia Channing, Ria Patel, Paula Olaya, Ariel Keller Rorabaugh, Osamu Miyashita, Silvina Caíno-Lores, Catherine D. Schuman, Florence Tama, Michela Taufer
2022 B conf
A Methodology to Generate Efficient Neural Networks for Classification of Scientific Datasets.
e-Science
Ria Patel, Ariel Keller Rorabaugh, Paula Olaya, Silvina Caíno-Lores, Georgia Channing, Catherine D. Schuman, Osamu Miyashita, Florence Tama, Michela Taufer
2022 B conf
Identifying Structural Properties of Proteins from X-ray Free Electron Laser Diffraction Patterns.
e-Science
Paula Olaya, Silvina Caíno-Lores, Vanessa Lama, Ria Patel, Ariel Keller Rorabaugh, Osamu Miyashita, Florence Tama, Michela Taufer
2021 J jnl
Protocol for Retrieving Three-Dimensional Biological Shapes for a Few XFEL Single-Particle Diffraction Patterns.
J. Chem. Inf. Model.
Sandhya P. Tiwari, Florence Tama, Osamu Miyashita
2020 J jnl
Computational Protocol for Assessing the Optimal Pixel Size to Improve the Accuracy of Single-particle Cryo-electron Microscopy Maps.
J. Chem. Inf. Model.
Sandhya P. Tiwari, Sahil Chhabra, Florence Tama, Osamu Miyashita
2018 J jnl
Poisson image denoising by piecewise principal component analysis and its application in single-particle X-ray diffraction imaging.
IET Image Process.
Qiyu Jin, Osamu Miyashita, Florence Tama, Jie Yang, Slavica Jonic
2018 J jnl
Searching for 3D structural models from a library of biological shapes using a few 2D experimental images.
BMC Bioinform.
Sandhya P. Tiwari, Florence Tama, Osamu Miyashita
2017 J jnl
Flexible fitting to cryo-EM density map using ensemble molecular dynamics simulations.
J. Comput. Chem.
Osamu Miyashita, Chigusa Kobayashi, Takaharu Mori, Yuji Sugita, Florence Tama
2014 B conf
Elastic image registration to fully explore macromolecular dynamics by electron microscopy.
ICIP
Qiyu Jin, Carlos Oscar Sánchez Sorzano, Isabelle Callebaut, Florence Tama, Slavica Jonic
2013 J jnl
3DEM Loupe: analysis of macromolecular dynamics using structures from electron microscopy.
Nucleic Acids Res.
Rubén Nogales-Cadenas, Slavica Jonic, Florence Tama, A. A. Arteni, Daniel Tabas-Madrid, Miguel Vázquez, Alberto D. Pascual-Montano, Carlos Oscar Sánchez Sorzano
2013 J jnl
Steered Molecular Dynamics Simulations of a Type IV Pilus Probe Initial Stages of a Force-Induced Conformational Transition.
PLoS Comput. Biol.
Joseph L. Baker, Nicolas Biais, Florence Tama
2004 J jnl
Topology representing neural networks reconcile biomolecular shape, structure, and dynamics.
Neurocomputing
Willy Wriggers, Pablo Chacón, Julio A. Kovacs, Florence Tama, Stefan Birmanns