Fidel Ramírez

12 papers Journal 9Unranked 2
YearRankTypeTitle / Venue / Authors
2021 J jnl
pyGenomeTracks: reproducible plots for multivariate genomic datasets.
Bioinform.
Lucille Lopez-Delisle, Leily Rabbani, Joachim Wolff, Vivek Bhardwaj, Rolf Backofen, Björn A. Grüning, Fidel Ramírez, Thomas Manke
2018 J jnl
Galaxy HiCExplorer: a web server for reproducible Hi-C data analysis, quality control and visualization.
Nucleic Acids Res.
Joachim Wolff, Vivek Bhardwaj, Stephan Nothjunge, Gautier Richard, Gina Renschler, Ralf Gilsbach, Thomas Manke, Rolf Backofen, Fidel Ramírez, Björn A. Grüning
2016 J jnl
deepTools2: a next generation web server for deep-sequencing data analysis.
Nucleic Acids Res.
Fidel Ramírez, Devon Patrick Ryan, Björn A. Grüning, Vivek Bhardwaj, Fabian Kilpert, Andreas S. Richter, Steffen Heyne, Friederike Dündar, Thomas Manke
2014 J jnl
deepTools: a flexible platform for exploring deep-sequencing data.
Nucleic Acids Res.
Fidel Ramírez, Friederike Dündar, Sarah Diehl, Björn A. Grüning, Thomas Manke
2012 J jnl
Novel search method for the discovery of functional relationships.
Bioinform.
Fidel Ramírez, Glenn Lawyer, Mario Albrecht
2011 — —
Novel approaches to the integration and analysis of systems biology data.
Fidel Ramírez
2009 J jnl
DASMI: exchanging, annotating and assessing molecular interaction data.
Bioinform.
Hagen Blankenburg, Robert D. Finn, Andreas Prlic, Andrew M. Jenkinson, Fidel Ramírez, Dorothea Emig, Sven-Eric Schelhorn, Joachim Büch, Thomas Lengauer, Mario Albrecht
2009 J jnl
DASMIweb: online integration, analysis and assessment of distributed protein interaction data.
Nucleic Acids Res.
Hagen Blankenburg, Fidel Ramírez, Joachim Büch, Mario Albrecht
2008 — conf
Applications of semantic similarity measures.
Ontologies and Text Mining for Life Sciences
Andreas Schlicker, Fidel Ramírez, Jörg Rahnenführer, Carola Huthmacher, Alejandro Pironti, Francisco S. Domingues, Thomas Lengauer, Mario Albrecht
2008 J jnl
Computing topological parameters of biological networks.
Bioinform.
Yassen Assenov, Fidel Ramírez, Sven-Eric Schelhorn, Thomas Lengauer, Mario Albrecht
2007 J jnl
Functional evaluation of domain-domain interactions and human protein interaction networks.
Bioinform.
Andreas Schlicker, Carola Huthmacher, Fidel Ramírez, Thomas Lengauer, Mario Albrecht
2006 — conf
Functional Evaluation of Domain-Domain Interactions and Human Protein Interaction Networks.
German Conference on Bioinformatics
Andreas Schlicker, Carola Huthmacher, Fidel Ramírez, Thomas Lengauer, Mario Albrecht