Fariza Tahi - RankMe

32 papers B 1C 2Misc 1Journal 22Unranked 6

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	MMnc: multi-modal interpretable representation for non-coding RNA classification and class annotation. Bioinform. Constance Creux, Farida Zehraoui, François Radvanyi, Fariza Tahi
2025	J	`jnl`	RNA-TorsionBERT: leveraging language models for RNA 3D torsion angles prediction. Bioinform. Clement Bernard, Guillaume Postic, Sahar Ghannay, Fariza Tahi
2024	J	`jnl`	Comparison and benchmark of deep learning methods for non-coding RNA classification. PLoS Comput. Biol. Constance Creux, Farida Zehraoui, François Radvanyi, Fariza Tahi
2024	J	`jnl`	RNAdvisor: a comprehensive benchmarking tool for the measure and prediction of RNA structural model quality. Briefings Bioinform. Clement Bernard, Guillaume Postic, Sahar Ghannay, Fariza Tahi
2023	J	`jnl`	C-RCPred: a multi-objective algorithm for interactive secondary structure prediction of RNA complexes integrating user knowledge and SHAPE data. Briefings Bioinform. Mandy Ibéné, Audrey Legendre, Guillaume Postic, Eric Angel, Fariza Tahi
2023	J	`jnl`	IRSOM2: a web server for predicting bifunctional RNAs. Nucleic Acids Res. Guillaume Postic, Christophe Tav, Ludovic Platon, Farida Zehraoui, Fariza Tahi
2023	C	`conf`	Prediction of Secondary Structure for Long Non-Coding RNAs using a Recursive Cutting Method based on Deep Learning. BIBE Loïc Omnes, Eric Angel, Pierre Bartet, François Radvanyi, Fariza Tahi
2021	J	`jnl`	A Greedy Clustering Algorithm for Multiple Sequence Alignment. Int. J. Cogn. Informatics Nat. Intell. Rabah Lebsir, Abdesslem Layeb, Fariza Tahi
2021	J	`jnl`	RNANet: an automatically built dual-source dataset integrating homologous sequences and RNA structures. Bioinform. Louis Becquey, Eric Angel, Fariza Tahi
2020	J	`jnl`	BiORSEO: a bi-objective method to predict RNA secondary structures with pseudoknots using RNA 3D modules. Bioinform. Louis Becquey, Eric Angel, Fariza Tahi
2019	J	`jnl`	RCPred: RNA complex prediction as a constrained maximum weight clique problem. BMC Bioinform. Audrey Legendre, Eric Angel, Fariza Tahi
2018	J	`jnl`	Bi-objective integer programming for RNA secondary structure prediction with pseudoknots. BMC Bioinform. Audrey Legendre, Eric Angel, Fariza Tahi
2018	J	`jnl`	IRSOM, a reliable identifier of ncRNAs based on supervised self-organizing maps with rejection. Bioinform. Ludovic Platon, Farida Zehraoui, Abdelhafid Bendahmane, Fariza Tahi
2018	—	`conf`	Localized Multiple Sources Self-Organizing Map. ICONIP (3) Ludovic Platon, Farida Zehraoui, Fariza Tahi
2017	—	`conf`	Self-organizing maps with supervised layer. WSOM Ludovic Platon, Farida Zehraoui, Fariza Tahi
2016	J	`jnl`	miRNAFold: a web server for fast miRNA precursor prediction in genomes. Nucleic Acids Res. Christophe Tav, Sébastien Tempel, Laurent Poligny, Fariza Tahi
2014	J	`jnl`	Towards a piRNA prediction using multiple kernel fusion and support vector machine. Bioinform. Jocelyn Brayet, Farida Zehraoui, Laurence Jeanson-Leh, David Israeli, Fariza Tahi
2012	J	`jnl`	ncRNAclassifier: a tool for detection and classification of transposable element sequences in RNA hairpins. BMC Bioinform. Sébastien Tempel, Nicolas Pollet, Fariza Tahi
2010	J	`jnl`	ModuleOrganizer: detecting modules in families of transposable elements. BMC Bioinform. Sébastien Tempel, Christine Rousseau, Fariza Tahi, Jacques Nicolas
2009	J	`jnl`	Behaviour Preservation of a Biological Regulatory Network when Embedded into a Larger Network. Fundam. Informaticae Gilles Bernot, Fariza Tahi
2008	—	`conf`	OMIE: Ontology Mapping within an Interactive and Extensible Environment. DILS Amel Bouzeghoub, Abdeltif Elbyed, Fariza Tahi
2007	J	`jnl`	Modélisation et simulation de la rAgulation de l'hématopopièse précoce grâce aux réseaux de Petri hybrides fonctionnels. Tech. Sci. Informatiques Sylvie Troncale, Fariza Tahi, David Campard, Jean-Pierre Vannier
2007	J	`jnl`	Predicting RNA secondary structure by the comparative approach: how to select the homologous sequences. BMC Bioinform. Stefan Engelen, Fariza Tahi
2006	Misc	`conf`	Modeling and Simulation with Hybrid Functional Petri Nets of the Role of Interleukin-6 in Human Early Haematopoiesis. Pacific Symposium on Biocomputing Sylvie Troncale, Fariza Tahi, David Campard, Jean-Pierre Vannier, Janine Guespin
2006	—	`conf`	The Renal Physiome Project. ISBI S. Randall Thomas, Fariza Tahi, Peter Harris, Andrew Lonie
2005	J	`jnl`	P-dcfold or How to Predict all Kinds of Pseudoknots in Rna Secondary Structures. Int. J. Artif. Intell. Tools Fariza Tahi, Stefan Engelen, Mireille Régnier
2004	—	`conf`	An Open Problem in RNA Secondary Structure Prediction by the Comparative Approach. METMBS Stefan Engelen, Fariza Tahi
2004	—	`conf`	Towards a Mediation System Framework for Transparent Access to Largely Distributed Sources. The MediaGrid Project. ICSNW Christine Collet, Khalid Belhajjame, Gilles Bernot, Christophe Bobineau, Gennaro Bruno, Béatrice Finance, Fabrice Jouanot, Zoubida Kedad, David Laurent, Fariza Tahi, Genoveva Vargas-Solar, Tuyet-Trinh Vu, Xiaohui Xue
2003	C	`conf`	A Fast Algorithm for NA Secondary Structure Prediction Including Pseudoknots. BIBE Fariza Tahi, Stefan Engelen, Mireille Régnier
2002	J	`jnl`	Automatic RNA Secondary Structure Prediction with a Comparative Approach. Comput. Chem. Fariza Tahi, Manolo Gouy, Mireille Régnier
1994	J	`jnl`	A New Challenge for Compression Algorithms: Genetic Sequences. Inf. Process. Manag. Stéphane Grumbach, Fariza Tahi
1993	B	`conf`	Compression of DNA Sequences. Data Compression Conference Stéphane Grumbach, Fariza Tahi