Fariza Tahi

32 papers B 1C 2Misc 1Journal 22Unranked 6
YearRankTypeTitle / Venue / Authors
2025 J jnl
MMnc: multi-modal interpretable representation for non-coding RNA classification and class annotation.
Bioinform.
Constance Creux, Farida Zehraoui, François Radvanyi, Fariza Tahi
2025 J jnl
RNA-TorsionBERT: leveraging language models for RNA 3D torsion angles prediction.
Bioinform.
Clement Bernard, Guillaume Postic, Sahar Ghannay, Fariza Tahi
2024 J jnl
Comparison and benchmark of deep learning methods for non-coding RNA classification.
PLoS Comput. Biol.
Constance Creux, Farida Zehraoui, François Radvanyi, Fariza Tahi
2024 J jnl
RNAdvisor: a comprehensive benchmarking tool for the measure and prediction of RNA structural model quality.
Briefings Bioinform.
Clement Bernard, Guillaume Postic, Sahar Ghannay, Fariza Tahi
2023 J jnl
C-RCPred: a multi-objective algorithm for interactive secondary structure prediction of RNA complexes integrating user knowledge and SHAPE data.
Briefings Bioinform.
Mandy Ibéné, Audrey Legendre, Guillaume Postic, Eric Angel, Fariza Tahi
2023 J jnl
IRSOM2: a web server for predicting bifunctional RNAs.
Nucleic Acids Res.
Guillaume Postic, Christophe Tav, Ludovic Platon, Farida Zehraoui, Fariza Tahi
2023 C conf
Prediction of Secondary Structure for Long Non-Coding RNAs using a Recursive Cutting Method based on Deep Learning.
BIBE
Loïc Omnes, Eric Angel, Pierre Bartet, François Radvanyi, Fariza Tahi
2021 J jnl
A Greedy Clustering Algorithm for Multiple Sequence Alignment.
Int. J. Cogn. Informatics Nat. Intell.
Rabah Lebsir, Abdesslem Layeb, Fariza Tahi
2021 J jnl
RNANet: an automatically built dual-source dataset integrating homologous sequences and RNA structures.
Bioinform.
Louis Becquey, Eric Angel, Fariza Tahi
2020 J jnl
BiORSEO: a bi-objective method to predict RNA secondary structures with pseudoknots using RNA 3D modules.
Bioinform.
Louis Becquey, Eric Angel, Fariza Tahi
2019 J jnl
RCPred: RNA complex prediction as a constrained maximum weight clique problem.
BMC Bioinform.
Audrey Legendre, Eric Angel, Fariza Tahi
2018 J jnl
Bi-objective integer programming for RNA secondary structure prediction with pseudoknots.
BMC Bioinform.
Audrey Legendre, Eric Angel, Fariza Tahi
2018 J jnl
IRSOM, a reliable identifier of ncRNAs based on supervised self-organizing maps with rejection.
Bioinform.
Ludovic Platon, Farida Zehraoui, Abdelhafid Bendahmane, Fariza Tahi
2018 — conf
Localized Multiple Sources Self-Organizing Map.
ICONIP (3)
Ludovic Platon, Farida Zehraoui, Fariza Tahi
2017 — conf
Self-organizing maps with supervised layer.
WSOM
Ludovic Platon, Farida Zehraoui, Fariza Tahi
2016 J jnl
miRNAFold: a web server for fast miRNA precursor prediction in genomes.
Nucleic Acids Res.
Christophe Tav, Sébastien Tempel, Laurent Poligny, Fariza Tahi
2014 J jnl
Towards a piRNA prediction using multiple kernel fusion and support vector machine.
Bioinform.
Jocelyn Brayet, Farida Zehraoui, Laurence Jeanson-Leh, David Israeli, Fariza Tahi
2012 J jnl
ncRNAclassifier: a tool for detection and classification of transposable element sequences in RNA hairpins.
BMC Bioinform.
Sébastien Tempel, Nicolas Pollet, Fariza Tahi
2010 J jnl
ModuleOrganizer: detecting modules in families of transposable elements.
BMC Bioinform.
Sébastien Tempel, Christine Rousseau, Fariza Tahi, Jacques Nicolas
2009 J jnl
Behaviour Preservation of a Biological Regulatory Network when Embedded into a Larger Network.
Fundam. Informaticae
Gilles Bernot, Fariza Tahi
2008 — conf
OMIE: Ontology Mapping within an Interactive and Extensible Environment.
DILS
Amel Bouzeghoub, Abdeltif Elbyed, Fariza Tahi
2007 J jnl
Modélisation et simulation de la rAgulation de l'hématopopièse précoce grâce aux réseaux de Petri hybrides fonctionnels.
Tech. Sci. Informatiques
Sylvie Troncale, Fariza Tahi, David Campard, Jean-Pierre Vannier
2007 J jnl
Predicting RNA secondary structure by the comparative approach: how to select the homologous sequences.
BMC Bioinform.
Stefan Engelen, Fariza Tahi
2006 Misc conf
Modeling and Simulation with Hybrid Functional Petri Nets of the Role of Interleukin-6 in Human Early Haematopoiesis.
Pacific Symposium on Biocomputing
Sylvie Troncale, Fariza Tahi, David Campard, Jean-Pierre Vannier, Janine Guespin
2006 — conf
The Renal Physiome Project.
ISBI
S. Randall Thomas, Fariza Tahi, Peter Harris, Andrew Lonie
2005 J jnl
P-dcfold or How to Predict all Kinds of Pseudoknots in Rna Secondary Structures.
Int. J. Artif. Intell. Tools
Fariza Tahi, Stefan Engelen, Mireille Régnier
2004 — conf
An Open Problem in RNA Secondary Structure Prediction by the Comparative Approach.
METMBS
Stefan Engelen, Fariza Tahi
2004 — conf
Towards a Mediation System Framework for Transparent Access to Largely Distributed Sources. The MediaGrid Project.
ICSNW
Christine Collet, Khalid Belhajjame, Gilles Bernot, Christophe Bobineau, Gennaro Bruno, Béatrice Finance, Fabrice Jouanot, Zoubida Kedad, David Laurent, Fariza Tahi, Genoveva Vargas-Solar, Tuyet-Trinh Vu, Xiaohui Xue
2003 C conf
A Fast Algorithm for NA Secondary Structure Prediction Including Pseudoknots.
BIBE
Fariza Tahi, Stefan Engelen, Mireille Régnier
2002 J jnl
Automatic RNA Secondary Structure Prediction with a Comparative Approach.
Comput. Chem.
Fariza Tahi, Manolo Gouy, Mireille Régnier
1994 J jnl
A New Challenge for Compression Algorithms: Genetic Sequences.
Inf. Process. Manag.
Stéphane Grumbach, Fariza Tahi
1993 B conf
Compression of DNA Sequences.
Data Compression Conference
Stéphane Grumbach, Fariza Tahi