Fabio Cumbo

23 papers Journal 15Unranked 8
YearRankTypeTitle / Venue / Authors
2026 J jnl
An Automatic Pipeline for the Integration of Python-Based Tools into the Galaxy Platform: Application to the anvi'o Framework.
CoRR
Fabio Cumbo, Jayadev Joshi, Daniel J. Blankenberg
2026 J jnl
Designing vector-symbolic architectures for biomedical applications: ten tips and common pitfalls.
PeerJ Comput. Sci.
Fabio Cumbo, Davide Chicco, Sercan Aygun, Daniel J. Blankenberg
2026 J jnl
hdlib 2.0: Extending Machine Learning Capabilities of Vector-Symbolic Architectures.
CoRR
Fabio Cumbo, Kabir Dhillon, Daniel J. Blankenberg
2025 J jnl
Feature selection with vector-symbolic architectures: a case study on microbial profiles of shotgun metagenomic samples of colorectal cancer.
Briefings Bioinform.
Fabio Cumbo, Simone Truglia, Emanuel Weitschek, Daniel J. Blankenberg
2025 J jnl
Hyperdimensional computing in biomedical sciences: a brief review.
PeerJ Comput. Sci.
Fabio Cumbo, Davide Chicco
2025 J jnl
Quantum Hyperdimensional Computing: a foundational paradigm for quantum neuromorphic architectures.
CoRR
Fabio Cumbo, Rui-Hao Li, Bryan A. Raubenolt, Jayadev Joshi, Abu Kaisar Mohammad Masum, Sercan Aygun, Daniel J. Blankenberg
2023 J jnl
An ontology-based approach for modelling and querying Alzheimer's disease data.
BMC Medical Informatics Decis. Mak.
Francesco Taglino, Fabio Cumbo, Giulia Antognoli, Ivan Arisi, Mara D'Onofrio, Federico Perazzoni, Roger Voyat, Giulia Fiscon, Federica Conte, Marco Canevelli, Giuseppe Bruno, Patrizia Mecocci, Paola Bertolazzi
2023 J jnl
Evaluating homophily in networks via
Bioinform.
Nicola Apollonio, Daniel J. Blankenberg, Fabio Cumbo, Paolo Giulio Franciosa, Daniele Santoni
2023 J jnl
Ten quick tips for avoiding pitfalls in multi-omics data integration analyses.
PLoS Comput. Biol.
Davide Chicco, Fabio Cumbo, Claudio Angione
2023 J jnl
hdlib: A Python library for designing Vector-Symbolic Architectures.
J. Open Source Softw.
Fabio Cumbo, Emanuel Weitschek, Daniel J. Blankenberg
2020 J jnl
A Brain-Inspired Hyperdimensional Computing Approach for Classifying Massive DNA Methylation Data of Cancer.
Algorithms
Fabio Cumbo, Eleonora Cappelli, Emanuel Weitschek
2020 — conf
An In-Memory Cognitive-Based Hyperdimensional Approach to Accurately Classify DNA-Methylation Data of Cancer.
DEXA Workshops
Fabio Cumbo, Emanuel Weitschek
2019 — conf
Extending Knowledge on Genomic Data and Metadata of Cancer by Exploiting Taxonomy-Based Relaxed Queries on Domain-Specific Ontologies.
CIBB
Eleonora Cappelli, Emanuel Weitschek, Fabio Cumbo
2019 — conf
Smart Persistence and Accessibility of Genomic and Clinical Data.
DEXA Workshops
Eleonora Cappelli, Emanuel Weitschek, Fabio Cumbo
2018 — conf
An ontology-based approach to improve data querying and organization of Alzheimer's Disease data.
BIBM
Ivan Arisi, Paola Bertolazzi, Eleonora Cappelli, Federica Conte, Fabio Cumbo, Giulia Fiscon, Michele Sonnessa, Francesco Taglino
2018 J jnl
Classification of Large DNA Methylation Datasets for Identifying Cancer Drivers.
Big Data Res.
Fabrizio Celli, Fabio Cumbo, Emanuel Weitschek
2018 J jnl
Classification of large DNA methylation datasets for identifying cancer drivers.
CoRR
Fabrizio Celli, Fabio Cumbo, Emanuel Weitschek
2018 — conf
Classifying Big DNA Methylation Data: A Gene-Oriented Approach.
DEXA Workshops
Emanuel Weitschek, Fabio Cumbo, Eleonora Cappelli, Giovanni Felici, Paola Bertolazzi
2018 J jnl
IWTomics: testing high-resolution sequence-based 'Omics' data at multiple locations and scales.
Bioinform.
Marzia A. Cremona, Alessia Pini, Fabio Cumbo, Kateryna D. Makova, Francesca Chiaromonte, Simone Vantini
2017 J jnl
TCGA2BED: extracting, extending, integrating, and querying The Cancer Genome Atlas.
BMC Bioinform.
Fabio Cumbo, Giulia Fiscon, Stefano Ceri, Marco Masseroli, Emanuel Weitschek
2016 — conf
COSYS: A Computational Infrastructure for Systems Biology.
CIBB
Fabio Cumbo, Marco S. Nobile, Chiara Damiani, Riccardo Colombo, Giancarlo Mauri, Paolo Cazzaniga
2016 — conf
Genomic Data Integration: A Case Study on Next Generation Sequencing of Cancer.
DEXA Workshops
Emanuel Weitschek, Fabio Cumbo, Eleonora Cappelli, Giovanni Felici
2016 — conf
IRIS-TCGA: An Information Retrieval and Integration System for Genomic Data of Cancer.
CIBB
Fabio Cumbo, Emanuel Weitschek, Paola Bertolazzi, Giovanni Felici