Evgenia V. Kriventseva

20 papers C 1Journal 17Unranked 2
YearRankTypeTitle / Venue / Authors
2023 J jnl
OrthoDB v11: annotation of orthologs in the widest sampling of organismal diversity.
Nucleic Acids Res.
Dmitry Kuznetsov, Fredrik Tegenfeldt, Mosè Manni, Mathieu Seppey, Matthew Berkeley, Evgenia V. Kriventseva, Evgeny M. Zdobnov
2021 J jnl
OrthoDB in 2020: evolutionary and functional annotations of orthologs.
Nucleic Acids Res.
Evgeny M. Zdobnov, Dmitry Kuznetsov, Fredrik Tegenfeldt, Mosè Manni, Matthew Berkeley, Evgenia V. Kriventseva
2019 J jnl
OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs.
Nucleic Acids Res.
Evgenia V. Kriventseva, Dmitry Kuznetsov, Fredrik Tegenfeldt, Mosè Manni, Renata Dias, Felipe A. Simão, Evgeny M. Zdobnov
2017 J jnl
OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs.
Nucleic Acids Res.
Evgeny M. Zdobnov, Fredrik Tegenfeldt, Dmitry Kuznetsov, Robert M. Waterhouse, Felipe A. Simão, Panagiotis Ioannidis, Mathieu Seppey, Alexis Loetscher, Evgenia V. Kriventseva
2015 J jnl
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.
Bioinform.
Felipe A. Simão, Robert M. Waterhouse, Panagiotis Ioannidis, Evgenia V. Kriventseva, Evgeny M. Zdobnov
2015 J jnl
OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software.
Nucleic Acids Res.
Evgenia V. Kriventseva, Fredrik Tegenfeldt, Tom J. Petty, Robert M. Waterhouse, Felipe A. Simão, Igor A. Pozdnyakov, Panagiotis Ioannidis, Evgeny M. Zdobnov
2013 J jnl
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs.
Nucleic Acids Res.
Robert M. Waterhouse, Fredrik Tegenfeldt, Jia Li, Evgeny M. Zdobnov, Evgenia V. Kriventseva
2011 J jnl
OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011.
Nucleic Acids Res.
Robert M. Waterhouse, Evgeny M. Zdobnov, Fredrik Tegenfeldt, Jia Li, Evgenia V. Kriventseva
2009 J jnl
miROrtho: computational survey of microRNA genes.
Nucleic Acids Res.
Daniel Gerlach, Evgenia V. Kriventseva, Nazim Rahman, Charles E. Vejnar, Evgeni M. Zdobnov
2008 J jnl
OrthoDB: the hierarchical catalog of eukaryotic orthologs.
Nucleic Acids Res.
Evgenia V. Kriventseva, Nazim Rahman, Octavio Espinosa, Evgeni M. Zdobnov
2003 J jnl
Improvements to CluSTr: the database of SWISS-PROT+TrEMBL protein clusters.
Nucleic Acids Res.
Evgenia V. Kriventseva, Florence Servant, Rolf Apweiler
2003 J jnl
The Proteome Analysis database: a tool for the in silico analysis of whole proteomes.
Nucleic Acids Res.
Manuela Pruess, Wolfgang Fleischmann, Alexander Kanapin, Youla Karavidopoulou, Paul J. Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Isabelle Phan, Florence Servant, Rolf Apweiler
2002 J jnl
Applications of InterPro in Protein Annotation and Genome Analysis.
Briefings Bioinform.
Margaret Biswas, Joseph F. O'Rourke, Evelyn Camon, Gillian Fraser, Alexander Kanapin, Youla Karavidopoulou, Paul J. Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Isabelle Phan, Florence Servant, Rolf Apweiler
2002 — conf
Automation of Protein Sequence Characterization and Its Application in Whole Proteome Analysis.
Gene Regulations and Metabolism
Rolf Apweiler, Margaret Biswas, Wolfgang Fleischmann, Evgenia V. Kriventseva, Nicola J. Mulder
2002 J jnl
Interactive InterPro-based comparisons of proteins in whole genomes.
Bioinform.
Alexander Kanapin, Rolf Apweiler, Margaret Biswas, Wolfgang Fleischmann, Youla Karavidopoulou, Paul J. Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Thomas M. Oinn, Isabelle Phan, Florence Servant, Evgeni M. Zdobnov
2002 C conf
Theoretical analysis of alternative splice forms using computational methods.
ECCB
Stéphanie Boué, Martin Vingron, Evgenia V. Kriventseva, Ina Koch
2001 J jnl
CluSTr: a database of clusters of SWISS-PROT+TrEMBL proteins.
Nucleic Acids Res.
Evgenia V. Kriventseva, Wolfgang Fleischmann, Evgeni M. Zdobnov, Rolf Apweiler
2001 J jnl
Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomes.
Nucleic Acids Res.
Rolf Apweiler, Margaret Biswas, Wolfgang Fleischmann, Alexander Kanapin, Youla Karavidopoulou, Paul J. Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Isabelle Phan, Evgeni M. Zdobnov
2000 J jnl
A collection of well characterised integral membrane proteins.
Bioinform.
Steffen Möller, Evgenia V. Kriventseva, Rolf Apweiler
2000 — conf
Proteome Analysis: Application of InterPro and CluSTr for the Functional Classification of Proteins in Whole Genomes.
German Conference on Bioinformatics
Margaret Biswas, Rolf Apweiler, Wolfgang Fleischmann, Alexander Kanapin, Youla Karavidopoulou, Paul J. Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Thomas M. Oinn, Isabelle Phan, Evgeni M. Zdobnov