Eva Balsa-Canto

31 papers C 1Misc 3Journal 22Unranked 5
YearRankTypeTitle / Venue / Authors
2025 J jnl
Identification of dynamic models of microbial communities: A workflow addressing identifiability and modeling pitfalls.
PLoS Comput. Biol.
Ana Paredes-Vázquez, Eva Balsa-Canto, Julio R. Banga
2024 — conf
Integrating Kinetic Models with Genome-Scale Constraints to Explain Yeast-Based Batch Fermentation.
CDC
Artai R. Moimenta, Diego Troitiño-Jordedo, Eva Balsa-Canto
2023 Misc conf
A New GIMME-Based Heuristic for Compartmentalised Transcriptomics Data Integration.
PACBB
Diego Troitiño-Jordedo, Lucas Carvalho, David Henriques, Vítor Pereira, Miguel Rocha, Eva Balsa-Canto
2020 J jnl
A two-dimensional multi-species model for different
Appl. Math. Comput.
Eva Balsa-Canto, Alejandro López-Núñez, Carlos Vázquez
2019 C conf
Information content analysis reveals desirable aspects of in vivo experiments of a synthetic circuit.
CIBCB
D. Gomez Cabeza, Lucia Bandiera, Eva Balsa-Canto, Filippo Menolascina
2018 J jnl
GenSSI 2.0: multi-experiment structural identifiability analysis of SBML models.
Bioinform.
Thomas S. Ligon, Fabian Fröhlich, Oana Chis, Julio R. Banga, Eva Balsa-Canto, Jan Hasenauer
2018 J jnl
Optimality and identification of dynamic models in systems biology: an inverse optimal control framework.
Bioinform.
Nikolaos Tsiantis, Eva Balsa-Canto, Julio R. Banga
2018 J jnl
Optimality and identification of dynamic models in systems biology: an inverse optimal control framework.
Bioinform.
Nikolaos Tsiantis, Eva Balsa-Canto, Julio R. Banga
2018 — conf
Optimally designed vs intuition-driven inputs: the study case of promoter activity modelling.
CDC
Lucia Bandiera, Varun Kothamachu, Eva Balsa-Canto, Peter S. Swain, Filippo Menolascina
2017 Misc conf
A Normalisation Strategy to Optimally Design Experiments in Computational Biology.
PACBB
Míriam R. García, Antonio A. Alonso, Eva Balsa-Canto
2016 J jnl
AMIGO2, a toolbox for dynamic modeling, optimization and control in systems biology.
Bioinform.
Eva Balsa-Canto, David Henriques, Attila Gábor, Julio R. Banga
2015 J jnl
A consensus approach for estimating the predictive accuracy of dynamic models in biology.
Comput. Methods Programs Biomed.
Alejandro Fernández Villaverde, Sophia Bongard, Klaus Mauch, Dirk Müller, Eva Balsa-Canto, Joachim Schmid, Julio R. Banga
2015 J jnl
BioPreDyn-bench: a suite of benchmark problems for dynamic modelling in systems biology.
BMC Syst. Biol.
Alejandro Fernández Villaverde, David Henriques, Kieran Smallbone, Sophia Bongard, Joachim Schmid, Damjan Cicin-Sain, Anton Crombach, Julio Saez-Rodriguez, Klaus Mauch, Eva Balsa-Canto, Pedro Mendes, Johannes Jaeger, Julio R. Banga
2015 J jnl
Optimal programs of pathway control: dissecting the influence of pathway topology and feedback inhibition on pathway regulation.
BMC Bioinform.
Gundián M. de Hijas-Liste, Eva Balsa-Canto, Jan Ewald, Martin Bartl, Pu Li, Julio R. Banga, Christoph Kaleta
2014 J jnl
BioPreDyn-bench: benchmark problems for kinetic modelling in systems biology.
CoRR
Alejandro Fernández Villaverde, David Henriques, Kieran Smallbone, Sophia Bongard, Joachim Schmid, Damjan Cicin-Sain, Anton Crombach, Julio Saez-Rodriguez, Klaus Mauch, Eva Balsa-Canto, Pedro Mendes, Johannes Jaeger, Julio R. Banga
2014 J jnl
Global dynamic optimization approach to predict activation in metabolic pathways.
BMC Syst. Biol.
Gundián M. de Hijas-Liste, Edda Klipp, Eva Balsa-Canto, Julio R. Banga
2014 Misc conf
High-Confidence Predictions in Systems Biology Dynamic Models.
PACBB
Alejandro Fernández Villaverde, Sophia Bongard, Klaus Mauch, Dirk Müller, Eva Balsa-Canto, Joachim Schmid, Julio R. Banga
2013 — conf
Optimal regulatory programs for the control of metabolic pathways: The case of feedback inhibition.
MED
Gundián M. de Hijas-Liste, Eva Balsa-Canto, Julio R. Banga, Christoph Kaleta
2013 J jnl
Reverse-Engineering Post-Transcriptional Regulation of Gap Genes in
PLoS Comput. Biol.
Kolja Becker, Eva Balsa-Canto, Damjan Cicin-Sain, Astrid Hoermann, Hilde Janssens, Julio R. Banga, Johannes Jaeger
2012 J jnl
Dynamic optimization of distributed biological systems using robust and efficient numerical techniques.
BMC Syst. Biol.
Carlos Vilas, Eva Balsa-Canto, Maria-Sonia G. García, Julio R. Banga, Antonio A. Alonso
2011 J jnl
AMIGO, a toolbox for advanced model identification in systems biology using global optimization.
Bioinform.
Eva Balsa-Canto, Julio R. Banga
2011 J jnl
GenSSI: a software toolbox for structural identifiability analysis of biological models.
Bioinform.
Oana Chis, Julio R. Banga, Eva Balsa-Canto
2011 J jnl
On-line estimation in a distributed parameter bioreactor: Application to the gluconic acid production.
Comput. Chem. Eng.
Míriam R. García, Carlos Vilas, Eva Balsa-Canto, Velislava N. Lyubenova, Maya N. Ignatova, Antonio A. Alonso
2010 J jnl
An iterative identification procedure for dynamic modeling of biochemical networks.
BMC Syst. Biol.
Eva Balsa-Canto, Antonio A. Alonso, Julio R. Banga
2010 J jnl
Dynamic multi-compartmental modelling of metal bioaccumulation in fish: Identifiability implications.
Environ. Model. Softw.
Irene Otero-Muras, Amaya Franco-Uría, Antonio A. Alonso, Eva Balsa-Canto
2009 J jnl
DOTcvpSB, a software toolbox for dynamic optimization in systems biology.
BMC Bioinform.
Tomás Hirmajer, Eva Balsa-Canto, Julio R. Banga
2009 J jnl
Dynamic Optimization of Chemical and Bio-chemical Processes using an Efficient Global Optimization Metaheuristic.
Simul. Notes Eur.
Jose A. Egea, Eva Balsa-Canto, Julio R. Banga
2009 — conf
Real time optimisation for thermal processes.
ECC
Míriam R. García, Carlos Vilas, Eva Balsa-Canto, Antonio A. Alonso
2008 J jnl
Hybrid optimization method with general switching strategy for parameter estimation.
BMC Syst. Biol.
Eva Balsa-Canto, Martin Peifer, Julio R. Banga, Jens Timmer, Christian Fleck
2008 J jnl
Optimal design and operation of a wastewater purification system.
Math. Comput. Simul.
Lino J. Alvarez-Vázquez, Eva Balsa-Canto, Aurea Martínez
2001 — conf
Optimal control of distributed processes using reduced order models.
ECC
Eva Balsa-Canto, Antonio A. Alonso, Julio R. Banga