Eugen Czeizler

47 papers A* 1B 3C 3Journal 28Unranked 12
YearRankTypeTitle / Venue / Authors
2024 — conf
Synergizing Data Imputation and Electronic Health Records for Advancing Prostate Cancer Research: Challenges, and Practical Applications.
BIOSTEC (2)
Abderrahim Oussama Batouche, Eugen Czeizler, Miika Koskinen, Tuomas Mirtti, Antti Sakari Rannikko
2023 J jnl
Synergizing Data Imputation and Electronic Health Records for Advancing Prostate Cancer Research: Challenges, and Practical Applications.
CoRR
Abderrahim Oussama Batouche, Eugen Czeizler, Miika Koskinen, Tuomas Mirtti, Antti Sakari Rannikko
2022 C conf
Distributed Simulations of DNA Multi-strand Dynamics.
SIMULTECH
Frankie Spencer, Usman Sanwal, Eugen Czeizler
2022 J jnl
Fixed Parameter Algorithms and Hardness of Approximation Results for the Structural Target Controllability Problem.
Sci. Ann. Comput. Sci.
Eugen Czeizler, Alexandru Popa, Victor Popescu
2022 J jnl
Network analytics for drug repurposing in COVID-19.
Briefings Bioinform.
Nicoleta Siminea, Victor-Bogdan Popescu, José Ángel Sánchez Martín, Daniela Florea, Georgiana Gavril, Ana Maria Gheorghe, Corina Itcus, Krishna Kanhaiya, Octavian Pacioglu, Laura Ioana Popa, Romica Trandafir, Maria Iris Tusa, Manuela Sidoroff, Mihaela Paun, Eugen Czeizler, Andrei Paun, Ion Petre
2021 J jnl
NetControl4BioMed: a web-based platform for controllability analysis of protein-protein interaction networks.
Bioinform.
Victor-Bogdan Popescu, José Ángel Sánchez Martín, Daniela Schacherer, Sadra Safadoust, Negin Majidi, Andrei Andronescu, Alexandru Nedea, Diana Ion, Eduard Mititelu, Eugen Czeizler, Ion Petre
2021 J jnl
Network modeling methods for precision medicine.
CoRR
Elio Nushi, Victor-Bogdan Popescu, José Ángel Sánchez Martín, Sergiu Ivanov, Eugen Czeizler, Ion Petre
2021 C conf
VDNA-Lab: A Computational Simulation Platform for DNA Multi-strand Dynamics.
SIMULTECH
Frankie Spencer, Usman Sanwal, Eugen Czeizler
2020 J jnl
Identifying efficient controls of complex interaction networks using genetic algorithms.
CoRR
Victor-Bogdan Popescu, Krishna Kanhaiya, Iulian Nastac, Eugen Czeizler, Ion Petre
2019 B conf
Simulation of one dimensional staged DNA tile assembly by the signal-passing hierarchical TAM.
KES
Gefry Barad, Alexandru Amarioarei, Mihaela Paun, Ana-Maria Dobre, Corina Itcus, Iris Tusa, Romica Trandafir, Eugen Czeizler
2018 — conf
DNA-Guided Assembly of Nanocellulose Meshes.
TPNC
Alexandru Amarioarei, Gefry Barad, Eugen Czeizler, Ana-Maria Dobre, Corina Itcus, Victor Mitrana, Andrei Paun, Mihaela Paun, Frankie Spencer, Romica Trandafir, Iris Tusa
2018 — conf
Fixed Parameter Algorithms and Hardness of Approximation Results for the Structural Target Controllability Problem.
AlCoB
Eugen Czeizler, Alexandru Popa, Victor Popescu
2018 J jnl
NetControl4BioMed: a pipeline for biomedical data acquisition and analysis of network controllability.
BMC Bioinform.
Krishna Kanhaiya, Vladimir Rogojin, Keivan Kazemi, Eugen Czeizler, Ion Petre
2018 J jnl
One Dimensional DNA Tiles Self Assembly Model Simulation.
Int. J. Unconv. Comput.
Alexandru Amarioarei, Gefry Barad, Elena Czeizler, Eugen Czeizler, Ana-Maria Dobre, Corina Itcus, Andrei Paun, Mihaela Paun, Romica Trandafir, Iris Tusa
2018 J jnl
Structural Target Controllability of Linear Networks.
IEEE ACM Trans. Comput. Biol. Bioinform.
Eugen Czeizler, Wu Kai Chiu, Cristian Gratie, Krishna Kanhaiya, Ion Petre
2017 J jnl
Computational modelling of the kinetic Tile Assembly Model using a rule-based approach.
Theor. Comput. Sci.
Abdulmelik Mohammed, Elena Czeizler, Eugen Czeizler
2016 — conf
Target Controllability of Linear Networks.
CMSB
Eugen Czeizler, Cristian Gratie, Wu Kai Chiu, Krishna Kanhaiya, Ion Petre
2015 — conf
An Excursion Through Quantitative Model Refinement.
Int. Conf. on Membrane Computing
Sepinoud Azimi, Eugen Czeizler, Cristian Gratie, Diana-Elena Gratie, Bogdan Iancu, Nebiat Ibssa, Ion Petre, Vladimir Rogojin, Tolou Shadbahr, Fatemeh Shokri
2015 J jnl
DNA rendering of polyhedral meshes at the nanoscale.
Nat.
Erik Benson, Abdulmelik Mohammed, Johan Gardell, Sergej Masich, Eugen Czeizler, Pekka Orponen, Björn Högberg
2014 — conf
Design of a Minimal System for Self-replication of Rectangular Patterns of DNA Tiles.
TPNC
Vinay Kumar Gautam, Eugen Czeizler, Pauline C. Haddow, Martin Kuiper
2014 J jnl
Search Methods for Tile Sets in Patterned DNA Self-Assembly.
CoRR
Mika Göös, Tuomo Lempiäinen, Eugen Czeizler, Pekka Orponen
2014 J jnl
Search methods for tile sets in patterned DNA self-assembly.
J. Comput. Syst. Sci.
Mika Göös, Tuomo Lempiäinen, Eugen Czeizler, Pekka Orponen
2013 J jnl
Synthesizing minimal tile sets for complex patterns in the framework of patterned DNA self-assembly.
Theor. Comput. Sci.
Eugen Czeizler, Alexandru Popa
2013 — conf
Yield Optimization Strategies for (DNA) Staged Tile Assembly Systems.
TPNC
Eugen Czeizler, Pekka Orponen
2012 J jnl
Quantitative Analysis of the Self-Assembly Strategies of Intermediate Filaments from Tetrameric Vimentin.
IEEE ACM Trans. Comput. Biol. Bioinform.
Eugen Czeizler, Andrzej Mizera, Elena Czeizler, Ralph-Johan Back, John E. Eriksson, Ion Petre
2012 J jnl
Quantitative Refinement of Reaction Models.
Int. J. Unconv. Comput.
Bogdan Iancu, Elena Czeizler, Eugen Czeizler, Ion Petre
2012 J jnl
Self-assembly Models of Variable Resolution.
Trans. Comp. Sys. Biology
Andrzej Mizera, Eugen Czeizler, Ion Petre
2012 B conf
Synthesizing Minimal Tile Sets for Complex Patterns in the Framework of Patterned DNA Self-Assembly.
DNA
Eugen Czeizler, Alexandru Popa
2012 J jnl
The Phosphorylation of the Heat Shock Factor as a Modulator for the Heat Shock Response.
IEEE ACM Trans. Comput. Biol. Bioinform.
Eugen Czeizler, Vladimir Rogojin, Ion Petre
2011 J jnl
An extension of the Lyndon-Schützenberger result to pseudoperiodic words.
Inf. Comput.
Elena Czeizler, Eugen Czeizler, Lila Kari, Shinnosuke Seki
2011 — conf
Quantitative Model Refinement as a Solution to the Combinatorial Size Explosion of Biomodels.
SASB
Elena Czeizler, Eugen Czeizler, Bogdan Iancu, Ion Petre
2011 B conf
Synthesizing Small and Reliable Tile Sets for Patterned DNA Self-assembly.
DNA
Tuomo Lempiäinen, Eugen Czeizler, Pekka Orponen
2011 — conf
The phosphorylation of the heat shock factor as a modulator for the heat shock response.
CMSB
Eugen Czeizler, Vladimir Rogojin, Ion Petre
2011 J jnl
Towards a neighborhood simplification of tile systems: From Moore to quasi-linear dependencies.
Nat. Comput.
Eugen Czeizler, Lila Kari
2009 C conf
An Extension of the Lyndon Schützenberger Result to Pseudoperiodic Words.
Developments in Language Theory
Elena Czeizler, Eugen Czeizler, Lila Kari, Shinnosuke Seki
2009 — conf
Control Strategies for the Regulation of the Eukaryotic Heat Shock Response.
CMSB
Elena Czeizler, Eugen Czeizler, Ralph-Johan Back, Ion Petre
2009 J jnl
Geometrical tile design for complex neighborhoods.
Frontiers Comput. Neurosci.
Eugen Czeizler, Lila Kari
2009 J jnl
On the descriptional complexity of Watson-Crick automata.
Theor. Comput. Sci.
Elena Czeizler, Eugen Czeizler, Lila Kari, Kai Salomaa
2008 J jnl
Unambiguous Automata.
Math. Comput. Sci.
Marie-Pierre Béal, Eugen Czeizler, Jarkko Kari, Dominique Perrin
2008 — conf
Watson-Crick automata: determinism and state complexity.
DCFS
Elena Czeizler, Eugen Czeizler, Lila Kari, Kai Salomaa
2007 J jnl
A tight linear bound on the synchronization delay of bijective automata.
Theor. Comput. Sci.
Eugen Czeizler, Jarkko Kari
2006 J jnl
A Short Survey on Watson-Crick Automata.
Bull. EATCS
Elena Czeizler, Eugen Czeizler
2006 J jnl
On the power of parallel communicating Watson-Crick automata systems.
Theor. Comput. Sci.
Elena Czeizler, Eugen Czeizler
2006 J jnl
Parallel Communicating Watson-Crick Automata Systems.
Acta Cybern.
Elena Czeizler, Eugen Czeizler
2005 A* conf
A Tight Linear Bound on the Neighborhood of Inverse Cellular Automata.
ICALP
Eugen Czeizler, Jarkko Kari
2004 J jnl
On the size of the inverse neighborhoods for one-dimensional reversible cellular automata.
Theor. Comput. Sci.
Eugen Czeizler
2002 — conf
Self-activating P Systems.
WMC-CdeA
Eugen Czeizler