Ettore Mosca

28 papers B 1C 2Journal 17Unranked 7
YearRankTypeTitle / Venue / Authors
2025 J jnl
Advances and challenges in cell-cell communication inference: a comprehensive review of tools, resources, and future directions.
Briefings Bioinform.
Giulia Cesaro, James Shiniti Nagai, Nicolò Gnoato, Alice Chiodi, Gaia Tussardi, Vanessa Klöker, Carmelo Vittorio Musumarra, Ettore Mosca, Ivan G. Costa, Barbara Di Camillo, Enrica Calura, Giacomo Baruzzo
2023 — conf
Intrinsic-Dimension Analysis for Guiding Dimensionality Reduction in Multi-Omics Data.
BIOINFORMATICS
Valentina Guarino, Jessica Gliozzo, Ferdinando Clarelli, Béatrice Pignolet, Kaalindi Misra, Elisabetta Mascia, Giordano Antonino, Silvia Santoro, Laura Ferré, Miryam Cannizzaro, Melissa Sorosina, Roland Liblau, Massimo Filippi, Ettore Mosca, Federica Esposito, Giorgio Valentini, Elena Casiraghi
2023 J jnl
scMuffin: an R package to disentangle solid tumor heterogeneity by single-cell gene expression analysis.
BMC Bioinform.
Valentina Nale, Alice Chiodi, Noemi Di Nanni, Ingrid Cifola, Marco Moscatelli, Cinzia Cocola, Matteo Gnocchi, Eleonora Piscitelli, Ada Sula, Ileana Zucchi, Rolland A. Reinbold, Luciano Milanesi, Alessandra Mezzelani, Paride Pelucchi, Ettore Mosca
2021 J jnl
Characterization and comparison of gene-centered human interactomes.
Briefings Bioinform.
Ettore Mosca, Matteo Bersanelli, Tommaso Matteuzzi, Noemi Di Nanni, Gastone C. Castellani, Luciano Milanesi, Daniel Remondini
2020 J jnl
Gene relevance based on multiple evidences in complex networks.
Bioinform.
Noemi Di Nanni, Matteo Gnocchi, Marco Moscatelli, Luciano Milanesi, Ettore Mosca
2019 J jnl
isma: an R package for the integrative analysis of mutations detected by multiple pipelines.
BMC Bioinform.
Noemi Di Nanni, Marco Moscatelli, Matteo Gnocchi, Luciano Milanesi, Ettore Mosca
2016 J jnl
Methods for the integration of multi-omics data: mathematical aspects.
BMC Bioinform.
Matteo Bersanelli, Ettore Mosca, Daniel Remondini, Enrico Giampieri, Claudia Sala, Gastone C. Castellani, Luciano Milanesi
2016 J jnl
Stochastic neutral modelling of the Gut Microbiota's relative species abundance from next generation sequencing data.
BMC Bioinform.
Claudia Sala, Silvia Vitali, Enrico Giampieri, Ìtalo Faria do Valle, Daniel Remondini, Paolo Garagnani, Matteo Bersanelli, Ettore Mosca, Luciano Milanesi, Gastone C. Castellani
2016 J jnl
Systems medicine of inflammaging.
Briefings Bioinform.
Gastone C. Castellani, Giulia Menichetti, Paolo Garagnani, Maria Giulia Bacalini, Chiara Pirazzini, Claudio Franceschi, Sebastiano Collino, Claudia Sala, Daniel Remondini, Enrico Giampieri, Ettore Mosca, Matteo Bersanelli, Silvia Vitali, Ìtalo Faria do Valle, Pietro Liò, Luciano Milanesi
2014 C conf
A CUDA Implementation of the Spatial TAU-Leaping in Crowded Compartments (STAUCC) Simulator.
PDP
Giulia Pasquale, Carlo Maj, Andrea Clematis, Ettore Mosca, Luciano Milanesi, Ivan Merelli, Daniele D'Agostino
2014 — conf
Evaluating mixed HTC/cloud approaches for parameter sweep applications in systems biology.
IWBBIO
Ivan Merelli, Ettore Mosca, Daniele Cesini, Elisabetta Ronchieri, Luciano Milanesi
2013 C conf
A Parallel Implementation of the Stau-DPP Stochastic Simulator for the Modelling of Biological Systems.
PDP
Ettore Mosca, Ivan Merelli, Luciano Milanesi, Andrea Clematis, Daniele D'Agostino
2013 J jnl
SNPranker 2.0: a gene-centric data mining tool for diseases associated SNP prioritization in GWAS.
BMC Bioinform.
Ivan Merelli, Andrea Calabria, Paolo Cozzi, Federica Viti, Ettore Mosca, Luciano Milanesi
2013 J jnl
Sensitivity Analysis for Studying the Relation between biochemical reactions and metabolic phenotypes.
J. Bioinform. Comput. Biol.
Carlo Maj, Ettore Mosca, Ivan Merelli, Giancarlo Mauri, Luciano Milanesi
2011 B conf
Grid Computing for Sensitivity Analysis of Stochastic Biological Models.
PaCT
Ivan Merelli, Dario Pescini, Ettore Mosca, Paolo Cazzaniga, Carlo Maj, Giancarlo Mauri, Luciano Milanesi
2011 — ch.
Modeling Biochemical Pathways.
Mathematical Approaches to Polymer Sequence Analysis and Related Problems
Ettore Mosca, Luciano Milanesi
2011 J jnl
Ontology-based resources for bioinformatics analysis.
Int. J. Metadata Semant. Ontologies
Federica Viti, Ivan Merelli, Andrea Calabria, Paolo Cozzi, Ettore Mosca, Roberta Alfieri, Luciano Milanesi
2010 J jnl
A multilevel data integration resource for breast cancer study.
BMC Syst. Biol.
Ettore Mosca, Roberta Alfieri, Ivan Merelli, Federica Viti, Andrea Calabria, Luciano Milanesi
2010 — conf
Modelling Spatial Heterogeneity and Macromolecular Crowding with Membrane Systems.
Int. Conf. on Membrane Computing
Ettore Mosca, Paolo Cazzaniga, Dario Pescini, Giancarlo Mauri, Luciano Milanesi
2010 J jnl
Overlapping Genes May Control Reprogramming of Mouse Somatic Cells into Induced Pluripotent Stem Cells (iPSCs) and Breast Cancer Stem Cells.
Silico Biol.
Ettore Mosca, Cinzia Cocola, Davood Sabour, Paride Pelucchi, Giovanni Bertalot, Orazio Palumbo, Massimo Carella, Martin Götte, Hans R. Schöler, Rolland A. Reinbold, Ileana Zucchi, Luciano Milanesi
2010 J jnl
SNPRanker: a tool for identification and scoring of SNPs associated to target genes.
J. Integr. Bioinform.
Andrea Calabria, Ettore Mosca, Federica Viti, Ivan Merelli, Luciano Milanesi
2009 — conf
A Novel Variant of P Systems for the Modelling and Simulation of Biochemical Systems.
Workshop on Membrane Computing
Paolo Cazzaniga, Giancarlo Mauri, Luciano Milanesi, Ettore Mosca, Dario Pescini
2009 J jnl
Identification of functionally related genes using data mining and data integration: a breast cancer case study.
BMC Bioinform.
Ettore Mosca, Gloria Bertoli, Eleonora Piscitelli, Laura Vilardo, Rolland A. Reinbold, Ileana Zucchi, Luciano Milanesi
2009 — conf
Ontological Enrichment of the
MTSR
Federica Viti, Ettore Mosca, Ivan Merelli, Andrea Calabria, Roberta Alfieri, Luciano Milanesi
2009 — conf
Sys-Bio Gateway: a Framework of Bioinformatics Database Resources Oriented to Systems Biology.
IWPLS
Luciano Milanesi, Roberta Alfieri, Ettore Mosca, Federica Viti, Pasqualina D'Ursi, Ivan Merelli
2008 J jnl
The cell cycle DB: a systems biology approach to cell cycle analysis.
Nucleic Acids Res.
Roberta Alfieri, Ivan Merelli, Ettore Mosca, Luciano Milanesi
2007 J jnl
A data integration approach for cell cycle analysis oriented to model simulation in systems biology.
BMC Syst. Biol.
Roberta Alfieri, Ivan Merelli, Ettore Mosca, Luciano Milanesi
2007 — conf
Parameter Estimation for Cell Cycle Ordinary Differential Equation (ODE) Models using a Grid Approach.
HealthGrid
Roberta Alfieri, Ettore Mosca, Ivan Merelli, Luciano Milanesi