Ester Bonmati

38 papers Journal 27Unranked 10
YearRankTypeTitle / Venue / Authors
2025 J jnl
Competing for Pixels: A Self-Play Algorithm for Weakly-Supervised Semantic Segmentation.
IEEE Trans. Pattern Anal. Mach. Intell.
Shaheer U. Saeed, Shiqi Huang, João Ramalhinho, Iani J. M. B. Gayo, Nina Montaña Brown, Ester Bonmati, Stephen P. Pereira, Brian R. Davidson, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu
2025 J jnl
Federated learning using quality-based aggregation method for brain tumour segmentation on multimodality medical images.
Intell. Syst. Appl.
Rim El Badaoui, Ester Bonmati, Vasileios Argyriou, Barbara Villarini
2024 J jnl
AI-assisted prostate cancer detection and localisation on biparametric MR by classifying radiologist-positives.
CoRR
Xiangcen Wu, Yipei Wang, Qianye Yang, Natasha Thorley, Shonit Punwani, Veeru Kasivisvanathan, Ester Bonmati, Yipeng Hu
2024 J jnl
Active learning using adaptable task-based prioritisation.
Medical Image Anal.
Shaheer U. Saeed, João Ramalhinho, Mark A. Pinnock, Ziyi Shen, Yunguan Fu, Nina Montaña Brown, Ester Bonmati, Dean C. Barratt, Stephen P. Pereira, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu
2024 J jnl
Competing for pixels: a self-play algorithm for weakly-supervised segmentation.
CoRR
Shaheer U. Saeed, Shiqi Huang, João Ramalhinho, Iani J. M. B. Gayo, Nina Montaña Brown, Ester Bonmati, Stephen P. Pereira, Brian R. Davidson, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu
2024 J jnl
The distinct roles of reinforcement learning between pre-procedure and intra-procedure planning for prostate biopsy.
Int. J. Comput. Assist. Radiol. Surg.
Iani J. M. B. Gayo, Shaheer U. Saeed, Ester Bonmati, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu
2022 J jnl
Active learning using adaptable task-based prioritisation.
CoRR
Shaheer U. Saeed, João Ramalhinho, Mark A. Pinnock, Ziyi Shen, Yunguan Fu, Nina Montaña Brown, Ester Bonmati, Dean C. Barratt, Stephen P. Pereira, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu
2022 J jnl
Deep hashing for global registration of untracked 2D laparoscopic ultrasound to CT.
Int. J. Comput. Assist. Radiol. Surg.
João Ramalhinho, Bongjin Koo, Nina Montaña Brown, Shaheer U. Saeed, Ester Bonmati, Kurinchi Gurusamy, Stephen P. Pereira, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson
2022 J jnl
Voice-Assisted Image Labeling for Endoscopic Ultrasound Classification Using Neural Networks.
IEEE Trans. Medical Imaging
Ester Bonmati, Yipeng Hu, Alexander Grimwood, Gavin J. Johnson, George Goodchild, Margaret G. Keane, Kurinchi Gurusamy, Brian R. Davidson, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt
2021 — conf
Endoscopic Ultrasound Image Synthesis Using a Cycle-Consistent Adversarial Network.
ASMUS@MICCAI
Alexander Grimwood, João Ramalhinho, Zachary M. C. Baum, Nina Montaña Brown, Gavin J. Johnson, Yipeng Hu, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt, Ester Bonmati
2021 — conf
Image quality assessment for closed-loop computer-assisted lung ultrasound.
Image-Guided Procedures
Zachary M. C. Baum, Ester Bonmati, Lorenzo Cristoni, Andrew Walden, Ferran Prados, Baris Kanber, Dean C. Barratt, David J. Hawkes, Geoff J. M. Parker, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu
2021 J jnl
Voice-assisted Image Labelling for Endoscopic Ultrasound Classification using Neural Networks.
CoRR
Ester Bonmati, Yipeng Hu, Alexander Grimwood, Gavin J. Johnson, George Goodchild, Margaret G. Keane, Kurinchi Gurusamy, Brian R. Davidson, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt
2020 — conf
Assisted Probe Positioning for Ultrasound Guided Radiotherapy Using Image Sequence Classification.
MICCAI (3)
Alex Grimwood, Helen McNair, Yipeng Hu, Ester Bonmati, Dean C. Barratt, Emma J. Harris
2020 J jnl
Assisted Probe Positioning for Ultrasound Guided Radiotherapy Using Image Sequence Classification.
CoRR
Alexander Grimwood, Helen McNair, Yipeng Hu, Ester Bonmati, Dean C. Barratt, Emma J. Harris
2020 J jnl
DeepReg: a deep learning toolkit for medical image registration.
CoRR
Yunguan Fu, Nina Montaña Brown, Shaheer U. Saeed, Adrià Casamitjana, Zachary M. C. Baum, Rémi Delaunay, Qianye Yang, Alexander Grimwood, Zhe Min, Stefano B. Blumberg, Juan Eugenio Iglesias, Dean C. Barratt, Ester Bonmati, Daniel C. Alexander, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2020 J jnl
DeepReg: a deep learning toolkit for medical image registration.
J. Open Source Softw.
Yunguan Fu, Nina Montaña Brown, Shaheer U. Saeed, Adrià Casamitjana, Zachary Baum, Rémi Delaunay, Qianye Yang, Alexander Grimwood, Zhe Min, Stefano B. Blumberg, Juan Eugenio Iglesias, Dean C. Barratt, Ester Bonmati, Daniel C. Alexander, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2020 J jnl
Image quality assessment for closed-loop computer-assisted lung ultrasound.
CoRR
Zachary M. C. Baum, Ester Bonmati, Lorenzo Cristoni, Andrew Walden, Ferran Prados, Baris Kanber, Dean C. Barratt, David J. Hawkes, Geoffrey J. M. Parker, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu
2020 J jnl
Introduction to Medical Image Registration with DeepReg, Between Old and New.
CoRR
Nina Montaña Brown, Yunguan Fu, Shaheer U. Saeed, Adrià Casamitjana, Zachary M. C. Baum, Rémi Delaunay, Qianye Yang, Alex Grimwood, Zhe Min, Ester Bonmati, Tom Vercauteren, Matthew J. Clarkson, Yipeng Hu
2020 J jnl
SciKit-Surgery: compact libraries for surgical navigation.
Int. J. Comput. Assist. Radiol. Surg.
Stephen A. Thompson, Thomas Dowrick, Mian Ahmad, Goufang Xiao, Bongjin Koo, Ester Bonmati, Kim Kahl, Matthew J. Clarkson
2019 J jnl
Automatic segmentation of prostate MRI using convolutional neural networks: Investigating the impact of network architecture on the accuracy of volume measurement and MRI-ultrasound registration.
Medical Image Anal.
Nooshin Ghavami, Yipeng Hu, Eli Gibson, Ester Bonmati, Mark Emberton, Caroline M. Moore, Dean C. Barratt
2018 — conf
Adversarial Deformation Regularization for Training Image Registration Neural Networks.
MICCAI (1)
Yipeng Hu, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, Tom Vercauteren, J. Alison Noble, Dean C. Barratt
2018 J jnl
Adversarial Deformation Regularization for Training Image Registration Neural Networks.
CoRR
Yipeng Hu, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, Tom Vercauteren, J. Alison Noble, Dean C. Barratt
2018 J jnl
Automatic Multi-Organ Segmentation on Abdominal CT With Dense V-Networks.
IEEE Trans. Medical Imaging
Eli Gibson, Francesco Giganti, Yipeng Hu, Ester Bonmati, Steve Bandula, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
2018 — conf
Automatic slice segmentation of intraoperative transrectal ultrasound images using convolutional neural networks.
Image-Guided Procedures
Nooshin Ghavami, Yipeng Hu, Ester Bonmati, Rachael Rodell, Eli Gibson, Caroline M. Moore, Dean C. Barratt
2018 J jnl
Determination of optimal ultrasound planes for the initialisation of image registration during endoscopic ultrasound-guided procedures.
Int. J. Comput. Assist. Radiol. Surg.
Ester Bonmati, Yipeng Hu, Eli Gibson, Laura Uribarri, Geri Keane, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
2018 — conf
Label-driven weakly-supervised learning for multimodal deformarle image registration.
ISBI
Yipeng Hu, Marc Modat, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
2018 J jnl
Novel Brain Complexity Measures Based on Information Theory.
Entropy
Ester Bonmati, Anton Bardera, Miquel Feixas, Imma Boada
2018 — conf
Technical note: automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network.
Image-Guided Procedures
Ester Bonmati, Yipeng Hu, Nikhil Sindhwani, Hans Peter Dietz, Jan D'hooge, Dean C. Barratt, Jan Deprest, Tom Vercauteren
2018 J jnl
Weakly-Supervised Convolutional Neural Networks for Multimodal Image Registration.
CoRR
Yipeng Hu, Marc Modat, Eli Gibson, Wenqi Li, Nooshin Ghavami, Ester Bonmati, Guotai Wang, Steven Bandula, Caroline M. Moore, Mark Emberton, Sébastien Ourselin, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
2018 J jnl
Weakly-supervised convolutional neural networks for multimodal image registration.
Medical Image Anal.
Yipeng Hu, Marc Modat, Eli Gibson, Wenqi Li, Nooshin Ghavami, Ester Bonmati, Guotai Wang, Steven Bandula, Caroline M. Moore, Mark Emberton, Sébastien Ourselin, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
2017 J jnl
Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network.
CoRR
Ester Bonmati, Yipeng Hu, Nikhil Sindhwani, Hans Peter Dietz, Jan D'hooge, Dean C. Barratt, Jan Deprest, Tom Vercauteren
2017 J jnl
Brain parcellation based on information theory.
Comput. Methods Programs Biomed.
Ester Bonmati, Anton Bardera, Imma Boada
2017 J jnl
Label-driven weakly-supervised learning for multimodal deformable image registration.
CoRR
Yipeng Hu, Marc Modat, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
2017 — conf
Towards Image-Guided Pancreas and Biliary Endoscopy: Automatic Multi-organ Segmentation on Abdominal CT with Dense Dilated Networks.
MICCAI (1)
Eli Gibson, Francesco Giganti, Yipeng Hu, Ester Bonmati, Steve Bandula, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
2016 — conf
2D-3D Registration Accuracy Estimation for Optimised Planning of Image-Guided Pancreatobiliary Interventions.
MICCAI (1)
Yipeng Hu, Ester Bonmati, Eli Gibson, John H. Hipwell, David J. Hawkes, Steven Bandula, Stephen P. Pereira, Dean C. Barratt
2016 — conf
Assessment of Electromagnetic Tracking Accuracy for Endoscopic Ultrasound.
CARE@MICCAI
Ester Bonmati, Yipeng Hu, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
2016 — —
Study of brain complexity using information theory tools.
Ester Bonmati
2015 J jnl
Hierarchical clustering based on the information bottleneck method using a control process.
Pattern Anal. Appl.
Ester Bonmati, Anton Bardera, Imma Boada, Miquel Feixas, Mateu Sbert