Eriko Takano

12 papers Journal 10Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
Cross-Granularity Representations for Biological Sequences: Insights from ESM and BiGCARP.
CoRR
Hanlin Xiao, Rainer Breitling, Eriko Takano, Mauricio A. Álvarez
2025 — conf
Cross-Granularity Representations for Biological Sequences: Insights From ESM and BiGCARP.
BIBM
Hanlin Xiao, Rainer Breitling, Eriko Takano, Mauricio A. Álvarez
2025 — conf
Proscope: Modeling Biosynthetic Diversity Via Probabilistic Structure-Aware Co-Embedding.
BIBM
Yiting Li, Eriko Takano, Jing Zhang, Ben Draper, Wayne Wei Zhong Yeo, Rainer Breitling
2025 J jnl
Synteny plot quality control with SyntenyQC.
Bioinform.
Timothy D. J. Kirkwood, Jack A. Connolly, Ee Lui Ang, Huimin Zhao, Eriko Takano, Rainer Breitling
2020 J jnl
Unravelling the γ-butyrolactone network in Streptomyces coelicolor by computational ensemble modelling.
PLoS Comput. Biol.
Areti Tsigkinopoulou, Eriko Takano, Rainer Breitling
2018 J jnl
Selenzyme: enzyme selection tool for pathway design.
Bioinform.
Pablo Carbonell, Jerry Wong, Neil Swainston, Eriko Takano, Nicholas J. Turner, Nigel S. Scrutton, Douglas B. Kell, Rainer Breitling, Jean-Loup Faulon
2017 J jnl
antiSMASH 4.0 - improvements in chemistry prediction and gene cluster boundary identification.
Nucleic Acids Res.
Kai Blin, Thomas Wolf, Marc G. Chevrette, Xiaowen Lu, Christopher J. Schwalen, Satria A. Kautsar, Hernando G. Suarez Duran, Emmanuel L. C. de los Santos, Hyun Uk Kim, Mariana Nave, Jeroen S. Dickschat, Douglas A. Mitchell, Ekaterina Shelest, Rainer Breitling, Eriko Takano, Sang Yup Lee, Tilmann Weber, Marnix H. Medema
2015 J jnl
antiSMASH 3.0 - a comprehensive resource for the genome mining of biosynthetic gene clusters.
Nucleic Acids Res.
Tilmann Weber, Kai Blin, Srikanth Duddela, Daniel Krug, Hyun Uk Kim, Robert E. Bruccoleri, Sang Yup Lee, Michael A. Fischbach, Rolf Müller, Wolfgang Wohlleben, Rainer Breitling, Eriko Takano, Marnix H. Medema
2014 J jnl
A Systematic Computational Analysis of Biosynthetic Gene Cluster Evolution: Lessons for Engineering Biosynthesis.
PLoS Comput. Biol.
Marnix H. Medema, Peter Cimermancic, Andrej Sali, Eriko Takano, Michael A. Fischbach
2014 J jnl
Pep2Path: Automated Mass Spectrometry-Guided Genome Mining of Peptidic Natural Products.
PLoS Comput. Biol.
Marnix H. Medema, Yared Paalvast, Don D. Nguyen, Alexey Melnik, Pieter C. Dorrestein, Eriko Takano, Rainer Breitling
2013 J jnl
antiSMASH 2.0 - a versatile platform for genome mining of secondary metabolite producers.
Nucleic Acids Res.
Kai Blin, Marnix H. Medema, Daniyal Kazempour, Michael A. Fischbach, Rainer Breitling, Eriko Takano, Tilmann Weber
2011 J jnl
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences.
Nucleic Acids Res.
Marnix H. Medema, Kai Blin, Peter Cimermancic, Victor de Jager, Piotr Zakrzewski, Michael A. Fischbach, Tilmann Weber, Eriko Takano, Rainer Breitling