Erik De Schutter

75 papers A* 1Journal 73Unranked 1

Year	Rank	Type	Title / Venue / Authors
2023	J	`jnl`	Efficient simulation of neural development using shared memory parallelization. Frontiers Neuroinformatics Erik De Schutter
2023	J	`jnl`	Models of Purkinje cell dendritic tree selection during early cerebellar development. PLoS Comput. Biol. Mizuki Kato, Erik De Schutter
2022	J	`jnl`	A differential Hebbian framework for biologically-plausible motor control. Neural Networks Sergio Oscar Verduzco-Flores, William Dorrell, Erik De Schutter
2022	J	`jnl`	STEPS 4.0: Fast and memory-efficient molecular simulations of neurons at the nanoscale. Frontiers Neuroinformatics Weiliang Chen, Tristan Carel, Omar Awile, Nicola Cantarutti, Giacomo Castiglioni, Alessandro Cattabiani, Baudouin Del Marmol, Iain Hepburn, James G. King, Christos Kotsalos, Pramod S. Kumbhar, Jules Lallouette, Samuel Melchior, Felix Schürmann, Erik De Schutter
2021	J	`jnl`	Farewell, Neuroinformatics! Neuroinformatics Giorgio A. Ascoli, David N. Kennedy, Erik De Schutter
2021	—	`conf`	Stochastic Spatially-Extended Simulations Predict the Effect of ER Distribution on Astrocytic Microdomain Ca2+ Activity. NANOCOM Audrey Denizot, Corrado Calì, Hugues Berry, Erik De Schutter
2020	A*	`conf`	Lamina-specific neuronal properties promote robust, stable signal propagation in feedforward networks. NeurIPS Dongqi Han, Erik De Schutter, Sungho Hong
2020	J	`jnl`	Lamina-specific neuronal properties promote robust, stable signal propagation in feedforward networks. CoRR Dongqi Han, Erik De Schutter, Sungho Hong
2020	J	`jnl`	Pycabnn: Efficient and Extensible Software to Construct an Anatomical Basis for a Physiologically Realistic Neural Network Model. Frontiers Neuroinformatics Ines Wichert, Sanghun Jee, Erik De Schutter, Sungho Hong
2019	J	`jnl`	Correction: Spatiotemporal network coding of physiological mossy fiber inputs by the cerebellar granular layer. PLoS Comput. Biol. Shyam Kumar Sudhakar, Sungho Hong, Ivan Raikov, Rodrigo Publio, Claus Lang, Thomas G. Close, Daqing Guo, Mario Negrello, Erik De Schutter
2019	J	`jnl`	Draculab: A Python Simulator for Firing Rate Neural Networks With Delayed Adaptive Connections. Frontiers Neuroinformatics Sergio Oscar Verduzco-Flores, Erik De Schutter
2019	J	`jnl`	Fallacies of Mice Experiments. Neuroinformatics Erik De Schutter
2018	J	`jnl`	Deep Learning and Computational Neuroscience. Neuroinformatics Erik De Schutter
2017	J	`jnl`	Parallel STEPS: Large Scale Stochastic Spatial Reaction-Diffusion Simulation with High Performance Computers. Frontiers Neuroinformatics Weiliang Chen, Erik De Schutter
2017	J	`jnl`	Spatiotemporal network coding of physiological mossy fiber inputs by the cerebellar granular layer. PLoS Comput. Biol. Shyam Kumar Sudhakar, Sungho Hong, Ivan Raikov, Rodrigo Publio, Claus Lang, Thomas G. Close, Daqing Guo, Mario Negrello, Erik De Schutter
2017	J	`jnl`	Time to Bring Single Neuron Modeling into 3D. Neuroinformatics Weiliang Chen, Erik De Schutter
2016	J	`jnl`	Neuroinformatics for Degenerate Brains. Neuroinformatics Erik De Schutter
2016	J	`jnl`	Parallel STEPS: Large Scale Stochastic Spatial Reaction-Diffusion Simulation with High Performance Computers. CoRR Weiliang Chen, Erik De Schutter
2015	J	`jnl`	Accurate Reaction-Diffusion Operator Splitting on Tetrahedral Meshes for Parallel Stochastic Molecular Simulations. CoRR Iain Hepburn, Weiliang Chen, Erik De Schutter
2015	J	`jnl`	Cerebellar Nuclear Neurons Use Time and Rate Coding to Transmit Purkinje Neuron Pauses. PLoS Comput. Biol. Shyam Kumar Sudhakar, Benjamin Torben-Nielsen, Erik De Schutter
2015	J	`jnl`	On the Firing Rate Dependency of the Phase Response Curve of Rat Purkinje Neurons PLoS Comput. Biol. João Couto, Daniele Linaro, Erik De Schutter, Michele Giugliano
2015	J	`jnl`	The Missing Piece of the Puzzle: Neuroinformatics at the Bench. Neuroinformatics Erik De Schutter
2014	J	`jnl`	Python-based geometry preparation and simulation visualization toolkits for STEPS. Frontiers Neuroinformatics Weiliang Chen, Erik De Schutter
2014	J	`jnl`	The Dangers of Plug-and-Play Simulation Using Shared Models. Neuroinformatics Erik De Schutter
2014	J	`jnl`	The role of dendritic spine morphology in the compartmentalization and delivery of surface receptors. J. Comput. Neurosci. Cory M. Simon, Iain Hepburn, Weiliang Chen, Erik De Schutter
2013	J	`jnl`	Collaborative Modeling in Neuroscience: Time to Go Open Model? Neuroinformatics Erik De Schutter
2013	J	`jnl`	Efficient calculation of the quasi-static electrical potential on a tetrahedral mesh and its implementation in STEPS. Frontiers Comput. Neurosci. Iain Hepburn, Robert C. Cannon, Erik De Schutter
2013	J	`jnl`	The importance of stochastic signaling processes in the induction of long-term synaptic plasticity. Neural Networks Erik De Schutter
2012	J	`jnl`	Geometric Theory Predicts Bifurcations in Minimal Wiring Cost Trees in Biology Are Flat. PLoS Comput. Biol. Yihwa Kim, Robert Sinclair, Nol Chindapol, Jaap A. Kaandorp, Erik De Schutter
2012	J	`jnl`	STEPS: efficient simulation of stochastic reaction-diffusion models in realistic morphologies. BMC Syst. Biol. Iain Hepburn, Weiliang Chen, Stefan Wils, Erik De Schutter
2012	J	`jnl`	Ten Years of Neuroinformatics. Neuroinformatics Erik De Schutter, Giorgio A. Ascoli, David N. Kennedy
2012	J	`jnl`	The Layer-Oriented Approach to Declarative Languages for Biological Modeling. PLoS Comput. Biol. Ivan Raikov, Erik De Schutter
2012	J	`jnl`	The Promise and Shortcomings of XML as an Interchange Format for Computational Models of Biology. Neuroinformatics Ivan Raikov, Erik De Schutter
2011	J	`jnl`	Determinants of synaptic integration and heterogeneity in rebound firing explored with data-driven models of deep cerebellar nucleus cells. J. Comput. Neurosci. Volker Steuber, Nathan W. Schultheiss, Angus Silver, Erik De Schutter, Dieter Jaeger
2011	J	`jnl`	Next Steps in Data Publishing. Neuroinformatics David N. Kennedy, Giorgio A. Ascoli, Erik De Schutter
2010	J	`jnl`	Data Publishing and Scientific Journals: The Future of the Scientific Paper in a World of Shared Data. Neuroinformatics Erik De Schutter
2009	J	`jnl`	Review of Papers Describing Neuroinformatics Software. Neuroinformatics Erik De Schutter, Giorgio A. Ascoli, David N. Kennedy
2009	J	`jnl`	STEPS: modeling and simulating complex reaction-diffusion systems with Python. Frontiers Neuroinformatics Stefan Wils, Erik De Schutter
2009	J	`jnl`	The International Neuroinformatics Coordinating Facility: Evaluating the First Years. Neuroinformatics Erik De Schutter
2008	J	`jnl`	Automated neuron model optimization techniques: a review. Biol. Cybern. Werner Van Geit, Erik De Schutter, Pablo Achard
2008	J	`jnl`	Calcium, synaptic plasticity and intrinsic homeostasis in Purkinje neuron models. Frontiers Comput. Neurosci. Pablo Achard, Erik De Schutter
2008	J	`jnl`	Reviewing Multi-Disciplinary Papers: a Challenge in Neuroscience? Neuroinformatics Erik De Schutter
2008	J	`jnl`	Why Are Computational Neuroscience and Systems Biology So Separate? PLoS Comput. Biol. Erik De Schutter
2007	J	`jnl`	A second look back. Neuroinformatics Erik De Schutter
2007	J	`jnl`	Interoperability of Neuroscience Modeling Software: Current Status and Future Directions. Neuroinformatics Robert C. Cannon, Marc-Oliver Gewaltig, Padraig Gleeson, Upinder S. Bhalla, Hugo Cornelis, Michael L. Hines, Fredrick W. Howell, Eilif B. Muller, Joel R. Stiles, Stefan Wils, Erik De Schutter
2007	J	`jnl`	Neurofitter: a parameter tuning package for a wide range of electrophysiological neuron models. Frontiers Neuroinformatics Werner Van Geit, Pablo Achard, Erik De Schutter
2007	J	`jnl`	Neuroscience Leading the Way: Reviews Cascade by the INCF. Neuroinformatics Erik De Schutter
2007	J	`jnl`	Neurospaces: Towards automated model partitioning for parallel computers. Neurocomputing Hugo Cornelis, Erik De Schutter
2006	J	`jnl`	A Novel High Channel-Count System for Acute Multisite Neuronal Recordings. IEEE Trans. Biomed. Eng. Ulrich G. Hofmann, Andre Folkers, Florian Mösch, Thomas Malina, Kerstin M. L. Menne, Gerardo Biella, Patriq Fagerstedt, Erik De Schutter, Winnie Jensen, Ken Yoshida, Dirk Hoehl, Uwe Thomas, Maria G. Kindlundh, Peter Norlin, Marco de Curtis
2006	J	`jnl`	Complex Parameter Landscape for a Complex Neuron Model. PLoS Comput. Biol. Pablo Achard, Erik De Schutter
2006	J	`jnl`	On the future of the human brain project. Neuroinformatics Erik De Schutter, Giorgio A. Ascoli, David N. Kennedy
2005	J	`jnl`	Changes and opportunities. Neuroinformatics Erik De Schutter
2005	J	`jnl`	Computational Neuroscience: Trends in Research 2005. Neurocomputing Erik De Schutter
2005	J	`jnl`	The Effect of NMDA Receptors on Gain Modulation. Neural Comput. Michiel Berends, Reinoud Maex, Erik De Schutter
2004	J	`jnl`	A detailed three-dimensional model of the cerebellar granular layer. Neurocomputing Michiel Berends, Reinoud Maex, Erik De Schutter
2004	J	`jnl`	A look back. Neuroinformatics Erik De Schutter
2004	J	`jnl`	Computational Neuroscience: Trends in research 2004. Neurocomputing Erik De Schutter
2004	J	`jnl`	Neurospaces parameter handling. Neurocomputing Hugo Cornelis, Erik De Schutter
2004	J	`jnl`	Passive models of neurons in the deep cerebellar nuclei: the effect of reconstruction errors. Neurocomputing Volker Steuber, Erik De Schutter, Dieter Jaeger
2003	J	`jnl`	An information science infrastructure for neuroscience. Neuroinformatics Giorgio A. Ascoli, Erik De Schutter, David N. Kennedy
2003	J	`jnl`	Involvement of multiple functionally distinct cerebellar regions in visual discrimination: a human functional imaging study. NeuroImage Kristl G. Claeys, Guy A. Orban, Patrick Dupont, Stefan Sunaert, Paul Van Hecke, Erik De Schutter
2003	J	`jnl`	NeuroSpaces: separating modeling and simulation. Neurocomputing Hugo Cornelis, Erik De Schutter
2003	J	`jnl`	Neuroscience data and tool sharing - A legal and policy framework for neuroinformatics. Neuroinformatics Peter Eckersley, Gary F. Egan, Erik De Schutter, Yiyuan Tang, Mirko Novak, Václav Sebesta, Line Matthiessen, Iiro P. Jääskeläinen, Ulla Ruotsalainen, Andreas V. M. Herz, K. Peter Hoffmann, Raphael Ritz, Viji Ravindranath, Francesco Beltrame, Shun-ichi Amari, Shiro Usui, Soo-Young Lee, Jaap van Pelt, Jan G. Bjaalie, Andrzej Wróbel, Fernando Mira da Silva, Carmen González, Sten Grillner, Paul F. M. J. Verschure, Turgay Dalkara, Robert Bennett, David Willshaw, Stephen H. Koslow, Perry L. Miller, Shankar Subramaniam, Arthur W. Toga
2003	J	`jnl`	Novelty detection in a Kohonen-like network with a long-term depression learning rule. Neurocomputing Dionyssios Theofilou, Volker Steuber, Erik De Schutter
2003	J	`jnl`	Synchronization of Purkinje cell pairs along the parallel fiber axis: a model. Neurocomputing Sergio Solinas, Reinoud Maex, Erik De Schutter
2002	J	`jnl`	Modulatory Effects of Parallel Fiber and Molecular Layer Interneuron Synaptic Activity on Purkinje Cell Responses to Ascending Segment Input: A Modeling Study. J. Comput. Neurosci. Fidel Santamaría, Dieter Jaeger, Erik De Schutter, James M. Bower
2002	J	`jnl`	NeuroML for plug and play neuronal modeling. Neurocomputing Nigel H. Goddard, David Beeman, Robert C. Cannon, Hugo Cornelis, Marc-Oliver Gewaltig, Greg Hood, Fredrick W. Howell, P. Rogister, Erik De Schutter, K. Shankar, Michael Hucka
2002	J	`jnl`	Rank order decoding of temporal parallel fibre input patterns in a complex Purkinje cell model. Neurocomputing Volker Steuber, Erik De Schutter
2001	J	`jnl`	Long-term depression and recognition of parallel fibre patterns in a multi-compartmental model of a cerebellar Purkinje cell. Neurocomputing Volker Steuber, Erik De Schutter
2001	J	`jnl`	NEOSIM: Portable large-scale plug and play modelling. Neurocomputing Nigel H. Goddard, Greg Hood, Fredrick W. Howell, Michael L. Hines, Erik De Schutter
2001	J	`jnl`	Synchronization between patches of local excitation in a cerebellar granular layer model. Neurocomputing Paul Franck, Reinoud Maex, Erik De Schutter
2000	J	`jnl`	A large-scale model of the cerebellar cortex using PGENESIS. Neurocomputing Fredrick W. Howell, Jonas Dyhrfjeld-Johnsen, Reinoud Maex, Nigel H. Goddard, Erik De Schutter
1995	J	`jnl`	Modeling the leech heartbeat elemental oscillator I. Interactions of intrinsic and synaptic currents. J. Comput. Neurosci. Farzan Nadim, Øystein H. Olsen, Erik De Schutter, Ronald L. Calabrese
1994	J	`jnl`	Voltage-imaging and simulation of effects of voltage- and agonist-activated conductances on soma-dendritic voltage coupling in cerebellar Purkinje cells. J. Comput. Neurosci. C. Staub, Erik De Schutter, Thomas Knöpfel
1993	J	`jnl`	Sensitivity of Synaptic Plasticity to the Ca Neural Comput. Erik De Schutter, James M. Bower