Elsa D. Angelini

169 papers A* 2A 2B 14Misc 1Journal 52Unranked 98

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Multi-View Transformers for Airway-To-Lung Ratio Inference on Cardiac CT Scans: The C4R Study. CoRR Sneha N. Naik, Elsa D. Angelini, Eric A. Hoffman, Elizabeth C. Oelsner, R. Graham Barr, Benjamin M. Smith, Andrew F. Laine
2025	—	`conf`	Multi-View Transformers for Airway-to-Lung Ratio Inference on Cardiac CT Scans: The C4R Study. ISBI Sneha N. Naik, Elsa D. Angelini, Eric A. Hoffman, Elizabeth C. Oelsner, R. Graham Barr, Benjamin M. Smith, Andrew F. Laine
2025	—	`conf`	SINETRA: A Versatile Framework for Evaluating Single Neuron Tracking in Behaving Animals. ISBI Raphael Reme, Alasdair Newson, Elsa D. Angelini, Jean-Christophe Olivo-Marin, Thibault Lagache
2024	J	`jnl`	Deep ContourFlow: Advancing Active Contours with Deep Learning. CoRR Antoine Habis, Vannary Meas-Yedid, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2024	—	`conf`	Dense Self-Supervised Learning for Medical Image Segmentation. MIDL Maxime Seince, Loïc Le Folgoc, Luiz Augusto Facury de Souza, Elsa D. Angelini
2024	J	`jnl`	Dense Self-Supervised Learning for Medical Image Segmentation. CoRR Maxime Seince, Loïc Le Folgoc, Luiz Augusto Facury de Souza, Elsa D. Angelini
2024	A*	`conf`	MAPSeg: Unified Unsupervised Domain Adaptation for Heterogeneous Medical Image Segmentation Based on 3D Masked Autoencoding and Pseudo-Labeling. CVPR Xuzhe Zhang, Yuhao Wu, Elsa D. Angelini, Ang Li, Jia Guo, Jerod M. Rasmussen, Thomas G. O'Connor, Pathik D. Wadhwa, Andrea Parolin Jackowski, Hai Li, Jonathan Posner, Andrew F. Laine, Yun Wang
2024	—	`conf`	Particle Tracking in Biological Images with Optical-Flow Enhanced Kalman Filtering. ISBI Raphael Reme, Alasdair Newson, Elsa D. Angelini, Jean-Christophe Olivo-Marin, Thibault Lagache
2024	—	`conf`	Robust Quantification of Percent Emphysema on CT Via Domain Attention: The Multi-Ethnic Study of Atherosclerosis (MESA) Lung Study. ISBI Xuzhe Zhang, Elsa D. Angelini, Eric A. Hoffman, Karol E. Watson, Benjamin M. Smith, R. Graham Barr, Andrew F. Laine
2024	J	`jnl`	Robust Quantification of Percent Emphysema on CT via Domain Attention: the Multi-Ethnic Study of Atherosclerosis (MESA) Lung Study. CoRR Xuzhe Zhang, Elsa D. Angelini, Eric A. Hoffman, Karol E. Watson, Benjamin M. Smith, R. Graham Barr, Andrew F. Laine
2024	J	`jnl`	Robust deep labeling of radiological emphysema subtypes using squeeze and excitation convolutional neural networks: The MESA Lung and SPIROMICS Studies. CoRR Artur Wysoczanski, Nabil Ettehadi, Soroush Arabshahi, Yifei Sun, Karen Hinkley Stukovsky, Karol E. Watson, MeiLan K. Han, Erin D. Michos, Alejandro P. Comellas, Eric A. Hoffman, Andrew F. Laine, R. Graham Barr, Elsa D. Angelini
2024	J	`jnl`	SINETRA: a Versatile Framework for Evaluating Single Neuron Tracking in Behaving Animals. CoRR Raphael Reme, Alasdair Newson, Elsa D. Angelini, Jean-Christophe Olivo-Marin, Thibault Lagache
2024	J	`jnl`	Scribble-based fast weak-supervision and interactive corrections for segmenting whole slide images. CoRR Antoine Habis, Roy Rosman Nathanson, Vannary Meas-Yedid, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2024	—	`conf`	Unsupervised Airway Tree Clustering with Deep Learning: the Multi-Ethnic Study of Atherosclerosis (Mesa) Lung Study. ISBI Sneha N. Naik, Elsa D. Angelini, R. Graham Barr, Norrina Allen, Alain Bertoni, Eric A. Hoffman, Ani Manichaikul, Jim Pankow, Wendy Post, Yifei Sun, Karol E. Watson, Benjamin M. Smith, Andrew F. Laine
2024	—	`conf`	Wavelet-Based Sparse Non-Negative Matrix Factorization for Bioluminescent Imaging Unmixing. ISBI Erwan Dereure, Christophe Kervazo, Johanne Seguin, Anikitos Garofalakis, Nathalie Mignet, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2023	J	`jnl`	Cardiac Adipose Tissue Segmentation via Image-Level Annotations. IEEE J. Biomed. Health Informatics Ziyi Huang, Yu Gan, Theresa Lye, Yanchen Liu, Haofeng Zhang, Andrew Laine, Elsa D. Angelini, Christine P. Hendon
2023	—	`conf`	Multi-View Cnn For Total Lung Volume Inference On Cardiac Computed Tomography. ISBI Artur Wysoczanski, Elsa D. Angelini, Yifei Sun, Benjamin M. Smith, Eric A. Hoffman, Karen Stukovsky, Matthew J. Budoff, Karol E. Watson, John Jeffrey Carr, Elizabeth C. Oelsner, R. Graham Barr, Andrew F. Laine
2023	—	`conf`	Sparse Non-Negative Matrix Factorization for Preclinical Bioluminescent Imaging. ISBI Erwan Dereure, Christophe Kervazo, Johanne Seguin, Anikitos Garofalakis, Nathalie Mignet, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2023	—	`conf`	Tracking Intermittent Particles with Self-Learned Visual Features. ISBI Raphael Reme, Victor Piriou, Alison Hanson, Rafael Yuste, Alasdair Newson, Elsa D. Angelini, Jean-Christophe Olivo-Marin, Thibault Lagache
2022	J	`jnl`	Cardiac Adipose Tissue Segmentation via Image-Level Annotations. CoRR Ziyi Huang, Yu Gan, Theresa Lye, Yanchen Liu, Haofeng Zhang, Andrew Laine, Elsa D. Angelini, Christine P. Hendon
2022	B	`conf`	Smart Learning of Click and Refine for Nuclei Segmentation on Histology Images. ICIP Antoine Habis, Vannary Meas-Yedid, Daniel Felipe Gonzalez Obando, Jean-Christophe Olivo-Marin, Elsa D. Angelini
2022	J	`jnl`	Suggestive Annotation of Brain MR Images with Gradient-guided Sampling. CoRR Chengliang Dai, Shuo Wang, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai
2022	J	`jnl`	Suggestive annotation of brain MR images with gradient-guided sampling. Medical Image Anal. Chengliang Dai, Shuo Wang, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai
2021	—	`conf`	3D U-Net Based Semantic Segmentation of Kidneys and Renal Masses on Contrast-Enhanced CT. KiTS@MICCAI Mingyang Zang, Artur Wysoczanski, Elsa D. Angelini, Andrew F. Laine
2021	—	`conf`	3d Pathological Signs Detection And Scoring On CPA CT Lung Scans. ISBI Afonso Nunes, Sujal R. Desai, Thomas Semple, Anand Shah, Elsa D. Angelini
2021	—	`conf`	Co-Seg: An Image Segmentation Framework Against Label Corruption. ISBI Ziyi Huang, Haofeng Zhang, Andrew Laine, Elsa D. Angelini, Christine P. Hendon, Yu Gan
2021	J	`jnl`	Co-Seg: An Image Segmentation Framework Against Label Corruption. CoRR Ziyi Huang, Haofeng Zhang, Andrew Laine, Elsa D. Angelini, Christine P. Hendon, Yu Gan
2021	—	`conf`	Enhanced-Quality Gan (EQ-GAN) on Lung CT Scans: Toward Truth and Potential Hallucinations. ISBI Martin Jammes-Floreani, Andrew F. Laine, Elsa D. Angelini
2021	J	`jnl`	Novel Subtypes of Pulmonary Emphysema Based on Spatially-Informed Lung Texture Learning: The Multi-Ethnic Study of Atherosclerosis (MESA) COPD Study. IEEE Trans. Medical Imaging Jie Yang, Elsa D. Angelini, Pallavi P. Balte, Eric A. Hoffman, John H. M. Austin, Benjamin M. Smith, R. Graham Barr, Andrew F. Laine
2021	J	`jnl`	QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Metrics and Benchmarking Results. CoRR Raghav Mehta, Angelos Filos, Ujjwal Baid, Chiharu Sako, Richard McKinley, Michael Rebsamen, Katrin Dätwyler, Raphael Meier, Piotr Radojewski, Gowtham Krishnan Murugesan, Sahil S. Nalawade, Chandan Ganesh, Benjamin C. Wagner, Fang F. Yu, Baowei Fei, Ananth J. Madhuranthakam, Joseph A. Maldjian, Laura Alexandra Daza, Catalina Gómez Caballero, Pablo Arbeláez, Chengliang Dai, Shuo Wang, Hadrien Raynaud, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai, Subhashis Banerjee, Linmin Pei, Murat Ak, Sarahi Rosas-González, Ilyess Zemmoura, Clovis Tauber, Minh H. Vu, Tufve Nyholm, Tommy Löfstedt, Laura Mora Ballestar, Verónica Vilaplana, Hugh McHugh, Gonzalo D. Maso Talou, Alan Wang, Jay B. Patel, Ken Chang, Katharina Hoebel, Mishka Gidwani, Nishanth Thumbavanam Arun, Sharut Gupta, Mehak Aggarwal, Praveer Singh, Elizabeth R. Gerstner, Jayashree Kalpathy-Cramer, Nicolas Boutry, Alexis Huard, Lasitha Vidyaratne, Md Monibor Rahman, Khan M. Iftekharuddin, Joseph Chazalon, Élodie Puybareau, Guillaume Tochon, Jun Ma, Mariano Cabezas, Xavier Lladó, Arnau Oliver, Liliana Valencia, Sergi Valverde, Mehdi Amian, Mohammadreza Soltaninejad, Andriy Myronenko, Ali Hatamizadeh, Xue Feng, Quan Dou, Nicholas J. Tustison, Craig H. Meyer, Nisarg A. Shah, Sanjay N. Talbar, Marc-André Weber, Abhishek Mahajan, András Jakab, Roland Wiest, Hassan M. Fathallah-Shaykh, Arash Nazeri, Mikhail Milchenko, Daniel S. Marcus, Aikaterini Kotrotsou, Rivka Colen, John B. Freymann, Justin S. Kirby, Christos Davatzikos, Bjoern H. Menze, Spyridon Bakas, Yarin Gal, Tal Arbel
2021	J	`jnl`	Recursive Refinement Network for Deformable Lung Registration between Exhale and Inhale CT Scans. CoRR Xinzi He, Jia Guo, Xuzhe Zhang, Hanwen Bi, Sarah E. Gerard, David W. Kaczka, Amin Motahari, Eric A. Hoffman, Joseph M. Reinhardt, R. Graham Barr, Elsa D. Angelini, Andrew Laine
2021	—	`conf`	Unsupervised Clustering Of Airway Tree Structures On High-Resolution CT: The Mesa Lung Study. ISBI Artur Wysoczanski, Elsa D. Angelini, Benjamin M. Smith, Eric A. Hoffman, Grant T. Hiura, Yifei Sun, R. Graham Barr, Andrew F. Laine
2020	J	`jnl`	Characterizing Alzheimer's Disease With Image and Genetic Biomarkers Using Supervised Topic Models. IEEE J. Biomed. Health Informatics Jie Yang, Xinyang Feng, Andrew F. Laine, Elsa D. Angelini
2020	—	`conf`	Encoding Human Cortex Using Spherical CNNs - A Study on Alzheimer's Disease Classification. ISBI Hugo Barbaroux, Xinyang Feng, Jie Yang, Andrew F. Laine, Elsa D. Angelini
2020	—	`conf`	Heterogeneity Measurement of Cardiac Tissues Leveraging Uncertainty Information from Image Segmentation. MICCAI (1) Ziyi Huang, Yu Gan, Theresa Lye, Haofeng Zhang, Andrew Laine, Elsa D. Angelini, Christine P. Hendon
2020	—	`conf`	Machine-Learning on Liver Ultrasound to Stratify Multiple Diseases via Blood-Vessels and Perfusion Characteristics. ISBI Jules Bayet, Tim Hoogenboom, Rohini Sharma, Elsa D. Angelini
2020	J	`jnl`	Novel Subtypes of Pulmonary Emphysema Based on Spatially-Informed Lung Texture Learning. CoRR Jie Yang, Elsa D. Angelini, Pallavi P. Balte, Eric A. Hoffman, John H. M. Austin, Benjamin M. Smith, R. Graham Barr, Andrew F. Laine
2020	—	`conf`	Segmentation and Uncertainty Measures of Cardiac Substrates within Optical Coherence Tomography Images via Convolutional Neural Networks. ISBI Ziyi Huang, Yu Gan, Theresa Lye, Darnel Theagene, Spandana Chintapalli, Simeran Virdi, Andrew Laine, Elsa D. Angelini, Christine P. Hendon
2020	—	`conf`	Self-training for Brain Tumour Segmentation with Uncertainty Estimation and Biophysics-Guided Survival Prediction. BrainLes@MICCAI (1) Chengliang Dai, Shuo Wang, Hadrien Raynaud, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai
2020	J	`jnl`	Simultaneous Left Atrium Anatomy and Scar Segmentations via Deep Learning in Multiview Information with Attention. CoRR Guang Yang, Jun Chen, Zhifan Gao, Shuo Li, Hao Ni, Elsa D. Angelini, Tom Wong, Raad Mohiaddin, Eva Nyktari, Ricardo Wage, Lei Xu, Yanping Zhang, Xiuquan Du, Heye Zhang, David N. Firmin, Jennifer Keegan
2020	J	`jnl`	Simultaneous left atrium anatomy and scar segmentations via deep learning in multiview information with attention. Future Gener. Comput. Syst. Guang Yang, Jun Chen, Zhifan Gao, Shuo Li, Hao Ni, Elsa D. Angelini, Tom Wong, Raad Mohiaddin, Eva Nyktari, Ricardo Wage, Lei Xu, Yanping Zhang, Xiuquan Du, Heye Zhang, David N. Firmin, Jennifer Keegan
2020	—	`conf`	Suggestive Annotation of Brain Tumour Images with Gradient-Guided Sampling. MICCAI (4) Chengliang Dai, Shuo Wang, Yuanhan Mo, Kaichen Zhou, Elsa D. Angelini, Yike Guo, Wenjia Bai
2020	J	`jnl`	Suggestive Annotation of Brain Tumour Images with Gradient-guided Sampling. CoRR Chengliang Dai, Shuo Wang, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai
2019	—	`conf`	Automatic Brain Tumour Segmentation and Biophysics-Guided Survival Prediction. BrainLes@MICCAI (2) Shuo Wang, Chengliang Dai, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai
2019	J	`jnl`	Automatic Brain Tumour Segmentation and Biophysics-Guided Survival Prediction. CoRR Shuo Wang, Chengliang Dai, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai
2019	—	`conf`	Automatic Segmentation and Identification of Spinous Processes on Sagittal X-Rays Based on Random Forest Classification and Dedicated Contextual Features. ISBI Shahin Ebrahimi, Laurent Gajny, Wafa Skalli, Elsa D. Angelini
2019	—	`conf`	Enhanced Generative Model for Unsupervised Discovery of Spatially-Informed Macroscopic Emphysema: The Mesa Copd Study. ISBI Yu Gan, Jie Yang, Benjamin M. Smith, Pallavi P. Balte, Eric A. Hoffman, Christine P. Hendon, R. Graham Barr, Andrew F. Laine, Elsa D. Angelini
2019	B	`ed.`	Medical Imaging 2019: Image Processing, San Diego, California, United States, 16-21 February 2019 Image Processing Elsa D. Angelini, Bennett A. Landman
2019	J	`jnl`	Quantifying Brain [ IEEE J. Biomed. Health Informatics Elisa Roccia, Arthur Mikhno, R. Todd Ogden, J. John Mann, Andrew F. Laine, Elsa D. Angelini, Francesca Zanderigo
2019	—	`conf`	SAPSAM - Sparsely Annotated Pathological Sign Activation Maps - A Novel Approach To Train Convolutional Neural Networks On Lung CT Scans Using Binary Labels Only. ISBI Mario Zusag, Sujal R. Desai, Marcello Di Paolo, Thomas Semple, Anand Shah, Elsa D. Angelini
2019	J	`jnl`	SAPSAM - Sparsely Annotated Pathological Sign Activation Maps - A novel approach to train Convolutional Neural Networks on lung CT scans using binary labels only. CoRR Mario Zusag, Sujal R. Desai, Marcello Di Paolo, Thomas Semple, Anand Shah, Elsa D. Angelini
2019	—	`conf`	Transfer Learning from Partial Annotations for Whole Brain Segmentation. DART/MIL3ID@MICCAI Chengliang Dai, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai
2019	J	`jnl`	Transfer Learning from Partial Annotations for Whole Brain Segmentation. CoRR Chengliang Dai, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai
2019	—	`conf`	Unsupervised Domain Adaption With Adversarial Learning (UDAA) for Emphysema Subtyping on Cardiac CT Scans: The Mesa Study. ISBI Jie Yang, Thomas Vetterli, Pallavi P. Balte, R. Graham Barr, Andrew F. Laine, Elsa D. Angelini
2019	J	`jnl`	Vertebral corners detection on sagittal X-rays based on shape modelling, random forest classifiers and dedicated visual features. Comput. methods Biomech. Biomed. Eng. Imaging Vis. Shahin Ebrahimi, Laurent Gajny, Wafa Skalli, Elsa D. Angelini
2018	—	`conf`	Alzheimer's disease diagnosis based on anatomically stratified texture analysis of the hippocampus in structural MRI. ISBI Xinyang Feng, Jie Yang, Andrew F. Laine, Elsa D. Angelini
2018	J	`jnl`	Denoising of Microscopy Images: A Review of the State-of-the-Art, and a New Sparsity-Based Method. IEEE Trans. Image Process. William Meiniel, Jean-Christophe Olivo-Marin, Elsa D. Angelini
2018	J	`jnl`	Discriminative analysis of the human cortex using spherical CNNs - a study on Alzheimer's disease diagnosis. CoRR Xinyang Feng, Jie Yang, Andrew F. Laine, Elsa D. Angelini
2018	B	`ed.`	Medical Imaging 2018: Image Processing, Houston, Texas, United States, 10-15 February 2018 Image Processing Elsa D. Angelini, Bennett A. Landman
2018	—	`conf`	Multiview Sequential Learning and Dilated Residual Learning for a Fully Automatic Delineation of the Left Atrium and Pulmonary Veins from Late Gadolinium-Enhanced Cardiac MRI Images. EMBC Guang Yang, Jun Chen, Zhifan Gao, Heye Zhang, Hao Ni, Elsa D. Angelini, Raad Mohiaddin, Tom Wong, Jennifer Keegan, David N. Firmin
2018	—	`conf`	Multiview Two-Task Recursive Attention Model for Left Atrium and Atrial Scars Segmentation. MICCAI (2) Jun Chen, Guang Yang, Zhifan Gao, Hao Ni, Elsa D. Angelini, Raad Mohiaddin, Tom Wong, Yanping Zhang, Xiuquan Du, Heye Zhang, Jennifer Keegan, David N. Firmin
2018	J	`jnl`	Multiview Two-Task Recursive Attention Model for Left Atrium and Atrial Scars Segmentation. CoRR Jun Chen, Guang Yang, Zhifan Gao, Hao Ni, Elsa D. Angelini, Raad Mohiaddin, Tom Wong, Yanping Zhang, Xiuquan Du, Heye Zhang, Jennifer Keegan, David N. Firmin
2017	—	`conf`	Discriminative Localization in CNNs for Weakly-Supervised Segmentation of Pulmonary Nodules. MICCAI (3) Xinyang Feng, Jie Yang, Andrew F. Laine, Elsa D. Angelini
2017	J	`jnl`	Discriminative Localization in CNNs for Weakly-Supervised Segmentation of Pulmonary Nodules. CoRR Xinyang Feng, Jie Yang, Andrew F. Laine, Elsa D. Angelini
2017	—	`conf`	Generative method to discover emphysema subtypes with unsupervised learning using lung macroscopic patterns (LMPS): The MESA COPD study. ISBI Jingkuan Song, Jie Yang, Benjamin M. Smith, Pallavi P. Balte, Eric A. Hoffman, R. Graham Barr, Andrew F. Laine, Elsa D. Angelini
2017	B	`ed.`	Medical Imaging 2017: Image Processing, Orlando, Florida, United States, 11-16 February 2017 Image Processing Martin A. Styner, Elsa D. Angelini
2017	—	`conf`	Reducing data acquisition for fast Structured Illumination Microscopy using Compressed Sensing. ISBI William Meiniel, Piernicola Spinicelli, Elsa D. Angelini, Alexandra Fragola, Vincent Loriette, François Orieux, Eduardo Sepulveda, Jean-Christophe Olivo-Marin
2017	—	`conf`	Unsupervised Discovery of Spatially-Informed Lung Texture Patterns for Pulmonary Emphysema: The MESA COPD Study. MICCAI (1) Jie Yang, Elsa D. Angelini, Pallavi P. Balte, Eric A. Hoffman, John H. M. Austin, Benjamin M. Smith, Jingkuan Song, R. Graham Barr, Andrew F. Laine
2016	J	`jnl`	Adaptive particle filtering for coronary artery segmentation from 3D CT angiograms. Comput. Vis. Image Underst. David Lesage, Elsa D. Angelini, Gareth Funka-Lea, Isabelle Bloch
2016	—	`conf`	Emphysema Quantification on Cardiac CT Scans Using Hidden Markov Measure Field Model: The MESA Lung Study. MICCAI (2) Jie Yang, Elsa D. Angelini, Pallavi P. Balte, Eric A. Hoffman, Colin O. Wu, Bharath A. Venkatesh, R. Graham Barr, Andrew F. Laine
2016	—	`conf`	Explaining Radiological Emphysema Subtypes with Unsupervised Texture Prototypes: MESA COPD Study. MCV/BAMBI@MICCAI Jie Yang, Elsa D. Angelini, Benjamin M. Smith, John H. M. Austin, Eric A. Hoffman, David A. Bluemke, R. Graham Barr, Andrew F. Laine
2016	J	`jnl`	Explaining Radiological Emphysema Subtypes with Unsupervised Texture Prototypes: MESA COPD Study. CoRR Jie Yang, Elsa D. Angelini, Benjamin M. Smith, John H. M. Austin, Eric A. Hoffman, David A. Bluemke, R. Graham Barr, Andrew F. Laine
2016	J	`jnl`	Guest Editorial IEEE EMBC 2015. IEEE J. Biomed. Health Informatics Elsa D. Angelini, Riccardo Bellazzi, Walter G. Besio, Marius George Linguraru
2016	—	`conf`	Lumbar spine posterior corner detection in X-rays using Haar-based features. ISBI Shahin Ebrahimi, Elsa D. Angelini, Laurent Gajny, Wafa Skalli
2016	B	`ed.`	Medical Imaging 2016: Image Processing, San Diego, California, USA, February 27, 2016 Image Processing Martin A. Styner, Elsa D. Angelini
2016	—	`conf`	Sparsity-based simplification of spectral-domain optical coherence tomography images of cardiac samples. ISBI William Meiniel, Yu Gan, Christine P. Hendon, Jean-Christophe Olivo-Marin, Andrew F. Laine, Elsa D. Angelini
2016	—	`conf`	Texton and sparse representation based texture classification of lung parenchyma in CT images. EMBC Jie Yang, Xinyang Feng, Elsa D. Angelini, Andrew F. Laine
2015	—	`conf`	BM3D-based ultrasound image denoising via brushlet thresholding. ISBI Yu Gan, Elsa D. Angelini, Andrew F. Laine, Christine P. Hendon
2015	—	`conf`	Equating emphysema scores and segmentations across CT reconstructions: A comparison study. ISBI Yrjo Horne, Elsa D. Angelini, R. Graham Barr, Andrew F. Laine
2015	—	`conf`	Image denoising by multiple compressed sensing reconstructions. ISBI William Meiniel, Yoann Le Montagner, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2015	—	`conf`	Non-invasive quantification of brain [ EMBC Elisa Roccia, Arthur Mikhno, Francesca Zanderigo, Elsa D. Angelini, R. Todd Ogden, J. John Mann, Andrew F. Laine
2015	J	`jnl`	Segmentation of embryonic and fetal 3D ultrasound images based on pixel intensity distributions and shape priors. Medical Image Anal. Sonia Dahdouh, Elsa D. Angelini, Gilles Grange, Isabelle Bloch
2015	—	`conf`	Sparse sampling and unsupervised learning of lung texture patterns in pulmonary emphysema: MESA COPD study. ISBI Yrjö Tapio Hame, Elsa D. Angelini, Megha A. Parikh, Benjamin M. Smith, Eric A. Hoffman, R. Graham Barr, Andrew F. Laine
2015	J	`jnl`	Toward Noninvasive Quantification of Brain Radioligand Binding by Combining Electronic Health Records and Dynamic PET Imaging Data. IEEE J. Biomed. Health Informatics Arthur Mikhno, Francesca Zanderigo, R. Todd Ogden, J. John Mann, Elsa D. Angelini, Andrew F. Laine, Ramin V. Parsey
2014	J	`jnl`	Adaptive Quantification and Longitudinal Analysis of Pulmonary Emphysema With a Hidden Markov Measure Field Model. IEEE Trans. Medical Imaging Yrjö Tapio Hame, Elsa D. Angelini, Eric A. Hoffman, R. Graham Barr, Andrew F. Laine
2014	J	`jnl`	An Unbiased Risk Estimator for Image Denoising in the Presence of Mixed Poisson-Gaussian Noise. IEEE Trans. Image Process. Yoann Le Montagner, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2014	—	`conf`	Locally weighted total variation denoising for PSF modeling artifact suppression in PET reconstruction. ISBI Arthur Mikhno, Elsa D. Angelini, Andrew F. Laine
2014	J	`jnl`	Maximum Likelihood Estimation of Shear Wave Speed in Transient Elastography. IEEE Trans. Medical Imaging Stéphane Audière, Elsa D. Angelini, Laurent Sandrin, Maurice Charbit
2014	B	`conf`	On the implementation of the multi-phase region segmentation, solving the hidden phase problem. ICIP Vincent Israel-Jost, Jérôme Darbon, Elsa D. Angelini, Isabelle Bloch
2014	—	`conf`	Toward diagnostic criteria for left ventricular systolic dysfunction from myocardial deformation. BHI Viktor Gamarnik, Cesare Russo, Elsa D. Angelini, Andrew Laine
2013	—	`conf`	Accurate and robust shape descriptors for the identification of RIB cage structures in CT-images with Random Forests. ISBI Mariem Gargouri, Julien Tierny, Erwan Jolivet, Philippe Petit, Elsa D. Angelini
2013	J	`jnl`	Automatic Segmentation of Antenatal 3-D Ultrasound Images. IEEE Trans. Biomed. Eng. Jérémie Anquez, Elsa D. Angelini, Gilles Grange, Isabelle Bloch
2013	J	`jnl`	Conciliating syntactic and semantic constraints for multi-phase and multi-channel region segmentation. Comput. Vis. Image Underst. Vincent Israel-Jost, Jérôme Darbon, Elsa D. Angelini, Isabelle Bloch
2013	—	`conf`	Locally weighted total variation denoising for ringing artifact suppression in pet reconstruction using PSF modeling. ISBI Arthur Mikhno, Elsa D. Angelini, Bing Bai, Andrew F. Laine
2013	—	`conf`	Phase retrieval with sparsity priors and application to microscopy video reconstruction. ISBI Yoann Le Montagner, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2013	—	`conf`	Robust quantification of pulmonary emphysema with a Hidden Markov Measure Field model. ISBI Yrjö Tapio Hame, Elsa D. Angelini, Eric A. Hoffman, R. Graham Barr, Andrew F. Laine
2013	—	`conf`	Segmentation of fetal envelope from 3D ultrasound images based on pixel intensity statistical distribution and shape priors. ISBI Sonia Dahdouh, Antoine Serrurier, Gilles Grange, Elsa D. Angelini, Isabelle Bloch
2012	J	`jnl`	A State-of-the-Art Review on Segmentation Algorithms in Intravascular Ultrasound (IVUS) Images. IEEE Trans. Inf. Technol. Biomed. Amin Katouzian, Elsa D. Angelini, Stephane G. Carlier, Jasjit S. Suri, Nassir Navab, Andrew F. Laine
2012	—	`conf`	Brushlet segmentation for automatic detection of lumen borders in IVUS images: A comparison study. ISBI Amin Katouzian, Elsa D. Angelini, Bernhard Sturm, Andrew F. Laine
2012	J	`jnl`	Differential MRI analysis for quantification of low grade glioma growth. Medical Image Anal. Elsa D. Angelini, Julie Delon, Alpha Boubacar Bah, Laurent Capelle, Emmanuel Mandonnet
2012	—	`conf`	Impact of temporal resolution on LV myocardial regional strain assessment with real-time 3D ultrasound. EMBC Auranuch Lorsakul, Viktor Gamarnik, Qi Duan, Cesare Russo, Elsa D. Angelini, Shunichi Homma, Andrew F. Laine
2012	—	`conf`	Maximum likelihood estimation of Young's modulus in transient elastography with unknown line-of-sight orientation. ISBI Maurice Charbit, Elsa D. Angelini, Stéphane Audière
2012	—	`conf`	Segmentation-free and multiscale-free extraction of medial information using Gradient Vector Flow - Application to vascular structures. ISBI Guillaume Pizaine, Raphael Prevost, Elsa D. Angelini, Isabelle Bloch, Shérif Makram-Ebeid
2012	B	`conf`	Video reconstruction using compressed sensing measurements and 3d total variation regularization for bio-imaging applications. ICIP Yoann Le Montagner, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2011	—	`conf`	Comparison of reconstruction algorithms in compressed sensing applied to biological imaging. ISBI Yoann Le Montagner, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2011	—	`conf`	Evaluation of in vivo Liver Tissue Characterization with Spectral RF Analysis versus Elasticity. MICCAI (1) Stéphane Audière, Elsa D. Angelini, Maurice Charbit, Véronique Miette
2011	J	`jnl`	Evidence for potentials and limitations of brain plasticity using an atlas of functional resectability of WHO grade II gliomas: Towards a "minimal common brain". NeuroImage Tamara Ius, Elsa D. Angelini, Michel Thiebaut de Schotten, Emmanuel Mandonnet, Hugues Duffau
2011	—	`conf`	FEMONUM: A Framework for Whole Body Pregnant Woman Modeling from Ante-Natal Imaging Data. Eurographics (Dirk Bartz Prize) Juan Pablo de la Plata Alcalde, Jérémie Anquez, Lazar Bibin, Tamy Boubekeur, Elsa D. Angelini, Isabelle Bloch
2011	B	`conf`	Implicit medial representation for vessel segmentation. Image Processing Guillaume Pizaine, Elsa D. Angelini, Isabelle Bloch, Shérif Makram-Ebeid
2011	B	`conf`	Numerical evaluation of sampling bounds for near-optimal reconstruction in compressed sensing. ICIP Yoann Le Montagner, Marcio de Moraes Marim, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2011	—	`conf`	Parameterization of real-time 3D speckle tracking framework for cardiac strain assessment. EMBC Auranuch Lorsakul, Qi Duan, Ming Jack Po, Elsa D. Angelini, Shunichi Homma, Andrew F. Laine
2011	—	`conf`	Vessel geometry modeling and segmentation using convolution surfaces and an implicit medial axis. ISBI Guillaume Pizaine, Elsa D. Angelini, Isabelle Bloch, Shérif Makram-Ebeid
2010	J	`jnl`	Compressed Sensing with off-axis frequency-shifting holography CoRR Marcio de Moraes Marim, Michael Atlan, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2010	—	`conf`	Compressed sensing for digital holographic microscopy. ISBI Marcio de Moraes Marim, Michael Atlan, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2010	—	`conf`	Contrast mapping and statistical testing for low-grade GLIOMA growth quantification on brain MRI. ISBI Elsa D. Angelini, Julie Delon, Laurent Capelle, Emmanuel Mandonnet
2010	J	`jnl`	Hybrid 3D pregnant woman and fetus modeling from medical imaging for dosimetry studies. Int. J. Comput. Assist. Radiol. Surg. Lazar Bibin, Jérémie Anquez, Elsa D. Angelini, Isabelle Bloch
2010	—	`conf`	Introducing Shape Constraint Via Legendre Moments in a Variational Framework for Cardiac Segmentation on Non-contrast CT Images. VISAPP (2) Julien Wojak, Elsa D. Angelini, Isabelle Bloch
2010	—	`conf`	Joint variational segmentation of CT-PET data for tumoral lesions. ISBI Julien Wojak, Elsa D. Angelini, Isabelle Bloch
2010	—	`conf`	Measurement of the Skin-Liver Capsule Distance on Ultrasound RF Data for 1D Transient Elastography. MICCAI (2) Stéphane Audière, Maurice Charbit, Elsa D. Angelini, Jennifer Oudry, Laurent Sandrin
2010	—	`conf`	Physics-Based Modeling of the Pregnant Woman. ISMBS Juan Pablo de la Plata Alcalde, Lazar Bibin, Jérémie Anquez, Tamy Boubekeur, Elsa D. Angelini, Isabelle Bloch
2010	J	`jnl`	Real-time segmentation by Active Geometric Functions. Comput. Methods Programs Biomed. Qi Duan, Elsa D. Angelini, Andrew F. Laine
2010	—	`conf`	Segmentation of the fetal envelope on ante-natal MRI. ISBI Jérémie Anquez, Lazar Bibin, Elsa D. Angelini, Isabelle Bloch
2010	J	`jnl`	Whole-Body Pregnant Woman Modeling By Digital Geometry Processing With Detailed Uterofetal Unit Based on Medical Images. IEEE Trans. Biomed. Eng. Lazar Bibin, Jérémy Anquez, Juan Pablo de la Plata Alcalde, Tamy Boubekeur, Elsa D. Angelini, Isabelle Bloch
2009	—	`conf`	A Compressed Sensing Approach for Biological Microscopic Image Processing. ISBI Marcio de Moraes Marim, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2009	J	`jnl`	A New Fuzzy Connectivity Measure for Fuzzy Sets. J. Math. Imaging Vis. Olivier Nempont, Jamal Atif, Elsa D. Angelini, Isabelle Bloch
2009	J	`jnl`	A review of 3D vessel lumen segmentation techniques: Models, features and extraction schemes. Medical Image Anal. David Lesage, Elsa D. Angelini, Isabelle Bloch, Gareth Funka-Lea
2009	—	`conf`	Automatic Segmentation of Head Structures on Fetal MRI. ISBI Jérémie Anquez, Elsa D. Angelini, Isabelle Bloch
2009	—	`conf`	Bayesian Maximal Paths for Coronary Artery Segmentation from 3D CT Angiograms. MICCAI (1) David Lesage, Elsa D. Angelini, Isabelle Bloch, Gareth Funka-Lea
2009	B	`conf`	Compressed Sensing in microscopy with random projections in the Fourier domain. ICIP Marcio de Moraes Marim, Elsa D. Angelini, Jean-Christophe Olivo-Marin
2009	—	`conf`	Coronary Occlusion Detection with 4D Optical Flow Based Strain Estimation on 4D Ultrasound. FIMH Qi Duan, Elsa D. Angelini, Auranuch Lorsakul, Shunichi Homma, Jeffrey W. Holmes, Andrew F. Laine
2009	—	`conf`	Design and Study of Flux-Based Features for 3D Vascular Tracking. ISBI David Lesage, Elsa D. Angelini, Isabelle Bloch, Gareth Funka-Lea
2009	—	`conf`	Lumen Border Detection of Intravascular Ultrasound via Denoising of Directional Wavelet Representations. FIMH Amin Katouzian, Elsa D. Angelini, Auranuch Lorsakul, Bernhard Sturm, Andrew F. Laine
2009	—	`conf`	Quantitative Validation of Optical Flow Based Myocardial Strain Measures Using Sonomicrometry. ISBI Qi Duan, Katherine Parker, Auranuch Lorsakul, Elsa D. Angelini, Eiichi Hyodo, Shunichi Homma, Jeffrey W. Holmes, Andrew Laine
2009	J	`jnl`	Surface Function Actives. J. Vis. Commun. Image Represent. Qi Duan, Elsa D. Angelini, Andrew F. Laine
2009	—	`conf`	Utero-Fetal Unit and Pregnant Woman Modeling Using a Computer Graphics Approach for Dosimetry Studies. MICCAI (1) Jérémie Anquez, Tamy Boubekeur, Lazar Bibin, Elsa D. Angelini, Isabelle Bloch
2008	J	`jnl`	Integrated multimedia electronic patient record and graph-based image information for cerebral tumors. Comput. Biol. Medicine John Puentes, Bénédicte Batrancourt, Jamal Atif, Elsa D. Angelini, Laurent Lecornu, Abdelhamid Zemirline, Isabelle Bloch, Gouenou Coatrieux, Christian Roux
2008	—	`conf`	Medial-based Bayesian tracking for vascular segmentation: Application to coronary arteries in 3D CT angiography. ISBI David Lesage, Elsa D. Angelini, Isabelle Bloch, Gareth Funka-Lea
2008	—	`conf`	Real-time segmentation of 4D ultrasound by Active Geometric Functions. ISBI Qi Duan, Elsa D. Angelini, Shunichi Homma, Andrew F. Laine
2008	—	`conf`	Segmentation of fetal 3D ultrasound based on statistical prior and deformable model. ISBI Jérémie Anquez, Elsa D. Angelini, Isabelle Bloch
2008	A	`conf`	Structure segmentation and recognition in images guided by structural constraint propagation. ECAI Olivier Nempont, Jamal Atif, Elsa D. Angelini, Isabelle Bloch
2008	—	`conf`	Vectorial multi-phase mouse brain tumor segmentation in T1-T2 MRI. ISBI Vincent Israel-Jost, Elodie Breton, Elsa D. Angelini, Philippe Choquet, Isabelle Bloch, André Constantinesco
2007	—	`conf`	Adaptive Segmentation of Internal Brain Structures in Pathological Mr Images Depending on Tumor Types. ISBI Hassan Khotanlou, Jamal Atif, Elsa D. Angelini, Hugues Duffau, Isabelle Bloch
2007	—	`conf`	Automated Segmentation of the Left Ventricle Including Papillary Muscles in Cardiac Magnetic Resonance Images. FIMH Racha El-Berbari, Isabelle Bloch, Alban Redheuil, Elsa D. Angelini, Élie Mousseaux, Frédérique Frouin, Alain Herment
2007	J	`jnl`	Brain MRI Segmentation with Multiphase Minimal Partitioning: A Comparative Study. Int. J. Biomed. Imaging Elsa D. Angelini, Ting Song, Brett D. Mensh, Andrew F. Laine
2007	Misc	`conf`	CT-PET Landmark-based Lung Registration Using a Dynamic Breathing Model. ICIAP Sylvie Chambon, Antonio Moreno-Ingelmo, Anand P. Santhanam, Jannick P. Rolland, Elsa D. Angelini, Isabelle Bloch
2007	—	`conf`	Combining Radiometric and Spatial Structural Information in a New Metric for Minimal Surface Segmentation. IPMI Olivier Nempont, Jamal Atif, Elsa D. Angelini, Isabelle Bloch
2007	—	`conf`	Detection of Glioma Evolution on Longitudinal Mri Studies. ISBI Elsa D. Angelini, Jamal Atif, Julie Delon, Emmanuel Mandonnet, Hugues Duffau, Laurent Capelle
2007	A*	`conf`	From Generic Knowledge to Specific Reasoning for Medical Image Interpretation Using Graph based Representations. IJCAI Jamal Atif, Céline Hudelot, Geoffroy Fouquier, Isabelle Bloch, Elsa D. Angelini
2007	—	`conf`	Grafip: A Framework for the Representation of Healthy and Pathological Cerebral Information. ISBI Jamal Atif, Céline Hudelot, Olivier Nempont, Nathalie Richard, Bénédicte Batrancourt, Elsa D. Angelini, Isabelle Bloch
2007	—	`conf`	Simulation of 3D Ultrasound with a Realistic Electro-mechanical Model of the Heart. FIMH Qi Duan, Philippe Moireau, Elsa D. Angelini, Dominique Chapelle, Andrew F. Laine
2007	—	`conf`	Thoracic CT-PET Registration Using a 3D Breathing Model. MICCAI (1) Antonio Moreno-Ingelmo, Sylvie Chambon, Anand P. Santhanam, Roberta Brocardo, Patrick Kupelian, Jannick P. Rolland, Elsa D. Angelini, Isabelle Bloch
2007	—	`conf`	Validation of Optical-Flow for Quantification of Myocardial Deformations on Simulated Rt3d Ultrasound. ISBI Qi Duan, Elsa D. Angelini, Shunichi Homma, Andrew Laine
2006	—	`conf`	An incremental and optimized learning method for the automatic classification of protein crystal images. EMBC (Supplement) George Xu, Casey Chiu, Elsa D. Angelini, Andrew F. Laine
2006	—	`conf`	Comparing optical-flow based methods for quantification of myocardial deformations on RT3D ultrasound. ISBI Qi Duan, Elsa D. Angelini, Olivier Gérard, Shunichi Homma, Andrew Laine
2006	—	`conf`	Homogeneity measures for multiphase level set segmentation of brain MRI. ISBI Elsa D. Angelini, Ting Song, Andrew Laine
2006	—	`conf`	Review of Myocardial Motion Estimation Methods from Optical Flow Tracking on Ultrasound Data. EMBC Elsa D. Angelini, Olivier Gérard
2006	—	`conf`	Tracking Endocardium Using Optical Flow along Iso-Value Curve. EMBC Qi Duan, Elsa D. Angelini, Shunichi Homma, Andrew Laine
2006	B	`conf`	Variational segmentation framework in prolate spheroidal coordinates for 3D real-time echocardiography. Image Processing Bruno Vallet, Elsa D. Angelini, Andrew F. Laine
2005	B	`conf`	Recognition of micro-array protein crystals images using multi-scale representations. Image Processing Ya Wang, David H. Kim, Elsa D. Angelini, Andrew F. Laine
2005	—	`conf`	Tracking of LV Endocardial Surface on Real-Time Three-Dimensional Ultrasound with Optical Flow. FIMH Qi Duan, Elsa D. Angelini, Susan L. Herz, Olivier Gérard, Pascal Allain, Christopher M. Ingrassia, Kevin D. Costa, Jeffrey W. Holmes, Shunichi Homma, Andrew Laine
2004	—	`conf`	Comparison of Ventricular Geometry for Two Real Time 3D Ultrasound Machines With Three Dimensional Level Set. ISBI Andrew Laine, Elsa D. Angelini, Ryo Otsuka, Shunichi Homma
2004	—	`conf`	Fusion of Brushlet and Wavelet Denoising Methods for Nuclear Images. ISBI Andrew Laine, Elsa D. Angelini, Yinpeng Jin, Peter D. Esser, Ronald L. Van Heertum
2004	—	`conf`	Multi-phase Three-Dimensional Level Set Segmentation of Brain MRI. MICCAI (1) Elsa D. Angelini, Ting Song, Brett D. Mensh, Andrew Laine
2004	B	`conf`	Segmentation and quantitative evaluation of brain MRI data with a multiphase 3D implicit deformable model. Image Processing Elsa D. Angelini, Ting Song, Brett D. Mensh, Andrew Laine
2003	—	`conf`	De-noising SPECT/PET Images Using Cross-Scale Regularization. MICCAI (2) Yinpeng Jin, Elsa D. Angelini, Peter D. Esser, Andrew Laine
2002	—	`conf`	Harmonic multiresolution estimators for denoising and regularization of SPECT-PET data. ISBI Elsa D. Angelini, Jérôme Kalifa, Andrew F. Laine
2002	B	`conf`	Improving statistics for hybrid segmentation of high-resolution multichannel images. Image Processing Elsa D. Angelini, Celina Imielinska, Yinpeng Jin, Andrew F. Laine
2001	J	`jnl`	LV Volume Quantification via Spatio-Temporal Analysis of Real-Time 3D Echocardiography. IEEE Trans. Medical Imaging Elsa D. Angelini, Andrew Laine, Shin Takuma, Jeffrey W. Holmes, Shunichi Homma
1999	A	`conf`	Directional Representations of 4D Echocardiography for Temporal Quantification of LV Volume. MICCAI Elsa D. Angelini, Andrew Laine, Shin Takuma, Shunichi Homma