Elizabeth S. Allman

20 papers Journal 20
YearRankTypeTitle / Venue / Authors
2025 J jnl
NANUQ
Algorithms Mol. Biol.
Elizabeth S. Allman, Hector Baños, John A. Rhodes, Kristina Wicke
2024 J jnl
Phylogenomic Models from Tree Symmetries.
SIAM J. Appl. Algebra Geom.
Elizabeth S. Allman, Colby Long, John A. Rhodes
2024 J jnl
TINNiK: inference of the tree of blobs of a species network under the coalescent model.
Algorithms Mol. Biol.
Elizabeth S. Allman, Hector Baños, Jonathan D. Mitchell, John A. Rhodes
2023 J jnl
Parameter Identifiability of a Multitype Pure-Birth Model of Speciation.
J. Comput. Biol.
Dakota Dragomir, Elizabeth S. Allman, John A. Rhodes
2023 J jnl
Testing Multispecies Coalescent Simulators Using Summary Statistics.
IEEE ACM Trans. Comput. Biol. Bioinform.
Elizabeth S. Allman, Hector Baños, John A. Rhodes
2021 J jnl
MSCquartets 1.0: quartet methods for species trees and networks under the multispecies coalescent model in R.
Bioinform.
John A. Rhodes, Hector Baños, Jonathan D. Mitchell, Elizabeth S. Allman
2021 J jnl
Parameter Identifiability for a Profile Mixture Model of Protein Evolution.
J. Comput. Biol.
Samaneh Yourdkhani, Elizabeth S. Allman, John A. Rhodes
2019 J jnl
NANUQ: a method for inferring species networks from gene trees under the coalescent model.
Algorithms Mol. Biol.
Elizabeth S. Allman, Hector Baños, John A. Rhodes
2019 J jnl
Species Tree Inference from Genomic Sequences Using the Log-Det Distance.
SIAM J. Appl. Algebra Geom.
Elizabeth S. Allman, Colby Long, John A. Rhodes
2018 J jnl
Species Tree Inference from Gene Splits by Unrooted STAR Methods.
IEEE ACM Trans. Comput. Biol. Bioinform.
Elizabeth S. Allman, James H. Degnan, John A. Rhodes
2017 J jnl
Statistically Consistent
J. Comput. Biol.
Elizabeth S. Allman, John A. Rhodes, Seth Sullivant
2014 J jnl
A Letter from the Guest Editors.
Am. Math. Mon.
Fred Adler, Elizabeth S. Allman, Lisette G. de Pillis
2014 J jnl
A Semialgebraic Description of the General Markov Model on Phylogenetic Trees.
SIAM J. Discret. Math.
Elizabeth S. Allman, John A. Rhodes, Amelia Taylor
2013 J jnl
Species Tree Inference by the STAR Method and Its Generalizations.
J. Comput. Biol.
Elizabeth S. Allman, James H. Degnan, John A. Rhodes
2013 J jnl
Tensor Rank, Invariants, Inequalities, and Applications.
SIAM J. Matrix Anal. Appl.
Elizabeth S. Allman, Peter D. Jarvis, John A. Rhodes, Jeremy G. Sumner
2011 J jnl
Identifiability of Two-Tree Mixtures for Group-Based Models.
IEEE ACM Trans. Comput. Biol. Bioinform.
Elizabeth S. Allman, Sonja Petrovic, John A. Rhodes, Seth Sullivant
2009 J jnl
The Identifiability of Covarion Models in Phylogenetics.
IEEE ACM Trans. Comput. Biol. Bioinform.
Elizabeth S. Allman, John A. Rhodes
2008 J jnl
Phylogenetic ideals and varieties for the general Markov model.
Adv. Appl. Math.
Elizabeth S. Allman, John A. Rhodes
2006 J jnl
Phylogenetic invariants for stationary base composition.
J. Symb. Comput.
Elizabeth S. Allman, John A. Rhodes
2006 J jnl
The Identifiability of Tree Topology for Phylogenetic Models, Including Covarion and Mixture Models.
J. Comput. Biol.
Elizabeth S. Allman, John A. Rhodes