Elisabeth Remy

30 papers C 3Journal 20Unranked 7
YearRankTypeTitle / Venue / Authors
2025 J jnl
Predictive modelling of acute Promyelocytic leukaemia resistance to retinoic acid therapy.
Briefings Bioinform.
José A. Sánchez-Villanueva, Lia N'guyen, Mathilde Poplineau, Estelle Duprez, Elisabeth Remy, Denis Thieffry
2025 J jnl
Refining Boolean models with the partial most permissive scheme.
Bioinform.
Nadine Ben Boina, Brigitte Mossé, Anaïs Baudot, Elisabeth Remy
2024 J jnl
From multivalued to Boolean functions: Preservation of soft nested canalization.
Theor. Comput. Sci.
Elisabeth Remy, Paul Ruet
2024 — conf
Logical Modelling, Some Recent Methodological Advances Illustrated.
AUTOMATA
Claudine Chaouiya, Pedro T. Monteiro, Elisabeth Remy
2024 J jnl
Refining Boolean models with the partial most permissive scheme.
CoRR
Nadine Ben Boina, Brigitte Mossé, Anaïs Baudot, Elisabeth Remy
2023 — conf
Average Sensitivity of Nested Canalizing Multivalued Functions.
CMSB
Elisabeth Remy, Paul Ruet
2023 J jnl
Logical modelling of myelofibrotic microenvironment predicts dysregulated progenitor stem cell crosstalk.
Biosyst.
Stephen P. Chapman, Estelle Duprez, Elisabeth Remy
2020 J jnl
MultiVERSE: a multiplex and multiplex-heterogeneous network embedding approach.
CoRR
Léo Pio-Lopez, Alberto Valdeolivas, Laurent Tichit, Elisabeth Remy, Anaïs Baudot
2019 J jnl
Random walk with restart on multiplex and heterogeneous biological networks.
Bioinform.
Alberto Valdeolivas, Laurent Tichit, Claire Navarro, Sophie Perrin, Gaëlle Odelin, Nicolas Levy, Pierre Cau, Elisabeth Remy, Anaïs Baudot
2015 J jnl
Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling.
PLoS Comput. Biol.
Åsmund Flobak, Anaïs Baudot, Elisabeth Remy, Liv Thommesen, Denis Thieffry, Martin Kuiper, Astrid Lægreid
2014 J jnl
Quantification of reachable attractors in asynchronous discrete dynamics.
CoRR
Nuno D. Mendes, Pedro T. Monteiro, Jorge Carneiro, Elisabeth Remy, Claudine Chaouiya
2012 J jnl
Relations between gene regulatory networks and cell dynamics in Boolean models.
Discret. Appl. Math.
Gilles Didier, Elisabeth Remy
2011 J jnl
Dynamically consistent reduction of logical regulatory graphs.
Theor. Comput. Sci.
Aurélien Naldi, Elisabeth Remy, Denis Thieffry, Claudine Chaouiya
2011 J jnl
Petri net representation of multi-valued logical regulatory graphs.
Nat. Comput.
Claudine Chaouiya, Aurélien Naldi, Elisabeth Remy, Denis Thieffry
2010 C conf
Reduction of Logical Models of Regulatory Networks Yields Insight into Dynamical properties.
CCA
Claudine Chaouiya, Aurélien Naldi, Elisabeth Remy, Denis Thieffry
2009 — conf
A Reduction of Logical Regulatory Graphs Preserving Essential Dynamical Properties.
CMSB
Aurélien Naldi, Elisabeth Remy, Denis Thieffry, Claudine Chaouiya
2008 C conf
From minimal signed circuits to the dynamics of Boolean regulatory networks.
ECCB
Elisabeth Remy, Paul Ruet
2008 J jnl
Graphic requirements for multistability and attractive cycles in a Boolean dynamical framework.
Adv. Appl. Math.
Elisabeth Remy, Paul Ruet, Denis Thieffry
2008 J jnl
Petri net modelling of biological regulatory networks.
J. Discrete Algorithms
Claudine Chaouiya, Elisabeth Remy, Denis Thieffry
2007 J jnl
On Differentiation and Homeostatic Behaviours of Boolean Dynamical Systems.
Trans. Comp. Sys. Biology
Elisabeth Remy, Paul Ruet
2006 J jnl
From Logical Regulatory Graphs to Standard Petri Nets: Dynamical Roles and Functionality of Feedback Circuits.
Trans. Comp. Sys. Biology
Elisabeth Remy, Paul Ruet, Luis Eduardo Mendoza, Denis Thieffry, Claudine Chaouiya
2006 J jnl
On Differentiation and Homeostatic Behaviours of Boolean Dynamical Systems.
Trans. Comp. Sys. Biology
Elisabeth Remy, Paul Ruet
2006 — conf
Positive or Negative Regulatory Circuit Inference from Multilevel Dynamics.
POSTA
Elisabeth Remy, Paul Ruet, Denis Thieffry
2006 J jnl
Qualitative Petri Net Modelling of Genetic Networks.
Trans. Comp. Sys. Biology
Claudine Chaouiya, Elisabeth Remy, Denis Thieffry
2005 — conf
Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in
ECCB/JBI
E. Simão, Elisabeth Remy, Denis Thieffry, Claudine Chaouiya
2004 — conf
Qualitative Modelling of Genetic Networks: From Logical Regulatory Graphs to Standard Petri Nets.
ICATPN
Claudine Chaouiya, Elisabeth Remy, Paul Ruet, Denis Thieffry
2003 C conf
A description of dynamical graphs associated to elementary regulatory circuits.
ECCB
Elisabeth Remy, Brigitte Mossé, Claudine Chaouiya, Denis Thieffry
2003 — conf
Qualitative Analysis of Regulatory Graphs: A Computational Tool Based on a Discrete Formal Framework.
POSTA
Claudine Chaouiya, Elisabeth Remy, Brigitte Mossé, Denis Thieffry
2002 J jnl
GeneANOVA-gene expression analysis of variance.
Bioinform.
Gilles Didier, Pierre Brézellec, Elisabeth Remy, Alain Hénaut
2001 J jnl
Homogenization of Elliptic Difference Operators.
SIAM J. Math. Anal.
Andrey Piatnitski, Elisabeth Remy