Elhanan Borenstein

18 papers Journal 17

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	KADAIF: an anomaly detection method for complex microbiome data. Bioinform. Omri Peleg, Maya Raytan, Elhanan Borenstein
2022	J	`jnl`	Integrating phylogenetic and functional data in microbiome studies. Bioinform. Gavin M. Douglas, Molly G. Hayes, Morgan G. I. Langille, Elhanan Borenstein
2022	J	`jnl`	MIMOSA2: a metabolic network-based tool for inferring mechanism-supported relationships in microbiome-metabolome data. Bioinform. Cecilia Noecker, Alexander Eng, Efrat Muller, Elhanan Borenstein
2020	J	`jnl`	MetaLAFFA: a flexible, end-to-end, distributed computing-compatible metagenomic functional annotation pipeline. BMC Bioinform. Alexander Eng, Adrian J. Verster, Elhanan Borenstein
2018	J	`jnl`	Metabolic model-based analysis of the emergence of bacterial cross-feeding via extensive gene loss. BMC Syst. Biol. Colin P. McNally, Elhanan Borenstein
2016	J	`jnl`	An algorithm for designing minimal microbial communities with desired metabolic capacities. Bioinform. Alexander Eng, Elhanan Borenstein
2015	J	`jnl`	NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation. BMC Bioinform. Roie Levy, Rogan Carr, Anat Kreimer, Shiri Freilich, Elhanan Borenstein
2014	J	`jnl`	Emergent Biosynthetic Capacity in Simple Microbial Communities. PLoS Comput. Biol. Hsuan-Chao Chiu, Roie Levy, Elhanan Borenstein
2013	J	`jnl`	Reconstructing the Genomic Content of Microbiome Taxa through Shotgun Metagenomic Deconvolution. PLoS Comput. Biol. Rogan Carr, Shai S. Shen-Orr, Elhanan Borenstein
2012	J	`jnl`	Computational systems biology and Briefings Bioinform. Elhanan Borenstein
2012	J	`jnl`	NetCmpt: a network-based tool for calculating the metabolic competition between bacterial species. Bioinform. Anat Kreimer, Adi Doron-Faigenboim, Elhanan Borenstein, Shiri Freilich
2012	J	`jnl`	NetCmpt: a network-based tool for calculating the metabolic competition between bacterial species. Bioinform. Anat Kreimer, Adi Doron-Faigenboim, Elhanan Borenstein, Shiri Freilich
2012	J	`jnl`	NetSeed: a network-based reverse-ecology tool for calculating the metabolic interface of an organism with its environment. Bioinform. Rogan Carr, Elhanan Borenstein
2010	J	`jnl`	Decoupling Environment-Dependent and Independent Genetic Robustness across Bacterial Species. PLoS Comput. Biol. Shiri Freilich, Anat Kreimer, Elhanan Borenstein, Uri Gophna, Roded Sharan, Eytan Ruppin
2009	J	`jnl`	Topological Signatures of Species Interactions in Metabolic Networks. J. Comput. Biol. Elhanan Borenstein, Marcus W. Feldman
2008	J	`jnl`	An End to Endless Forms: Epistasis, Phenotype Distribution Bias, and Nonuniform Evolution. PLoS Comput. Biol. Elhanan Borenstein, David C. Krakauer
2006	—	`—`	Evolutionary dynamics of adaptive populations: the effect of phenotypic plasticity, imitation and culture on evolution Elhanan Borenstein
2005	J	`jnl`	The evolution of imitation and mirror neurons in adaptive agents. Cogn. Syst. Res. Elhanan Borenstein, Eytan Ruppin

Kai Greshake, Sahar Abdelnabi, Shailesh Mishra, Christoph Endres, Thorsten Holz, Mario Fritz