Edgar Wingender

106 papers A 2C 1Misc 1Journal 67Unranked 32

Year	Rank	Type	Title / Venue / Authors
2019	—	`ch.`	Transcription Factor Databases. Encyclopedia of Bioinformatics and Computational Biology (2) Edgar Wingender, Alexander E. Kel, Mathias Krull
2019	J	`jnl`	Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer. BMC Bioinform. Alexander E. Kel, Ulyana Boyarskikh, Philip Stegmaier, Leonid S. Leskov, Andrey V. Sokolov, Ivan S. Yevshin, Nikita Mandrik, Daria Stelmashenko, Jeannette Koschmann, Olga V. Kel-Margoulis, Mathias Krull, Anna Martínez-Cardús, Sebastian Moran, Manel Esteller, Fedor A. Kolpakov, Maxim Filipenko, Edgar Wingender
2018	J	`jnl`	TFClass: expanding the classification of human transcription factors to their mammalian orthologs. Nucleic Acids Res. Edgar Wingender, Torsten Schoeps, Martin Haubrock, Mathias Krull, Jürgen Dönitz
2018	J	`jnl`	mirTrans: a resource of transcriptional regulation on microRNAs for human cell lines. Nucleic Acids Res. Xu Hua, Rongjun Tang, Xiuxiu Xu, Zhi Wang, Qi Xu, Luxiao Chen, Edgar Wingender, Jie Li, Chenyu Zhang, Jin Wang
2017	J	`jnl`	geneXplainR: An R interface for the geneXplain platform. J. Open Source Softw. Philip Stegmaier, Alexander E. Kel, Edgar Wingender
2016	J	`jnl`	Identifying cell-specific microRNA transcriptional start sites. Bioinform. Xu Hua, Luxiao Chen, Jin Wang, Jie Li, Edgar Wingender
2015	J	`jnl`	Multiobjective triclustering of time-series transcriptome data reveals key genes of biological processes. BMC Bioinform. Anirban Bhar, Martin Haubrock, Anirban Mukhopadhyay, Edgar Wingender
2015	J	`jnl`	PC-TraFF: identification of potentially collaborating transcription factors using pointwise mutual information. BMC Bioinform. Cornelia Meckbach, Rebecca Tacke, Xu Hua, Stephan Waack, Edgar Wingender, Mehmet Gültas
2015	J	`jnl`	TFClass: a classification of human transcription factors and their rodent orthologs. Nucleic Acids Res. Edgar Wingender, Torsten Schoeps, Martin Haubrock, Jürgen Dönitz
2014	J	`jnl`	EndoNet: an information resource about the intercellular signaling network. BMC Syst. Biol. Jürgen Dönitz, Edgar Wingender
2014	J	`jnl`	Quantum Coupled Mutation Finder: Predicting functionally or structurally important sites in proteins using quantum Jensen-Shannon divergence and CUDA programming. BMC Bioinform. Mehmet Gültas, Güncel Düzgün, Sebastian Herzog, Sven Joachim Jäger, Cornelia Meckbach, Edgar Wingender, Stephan Waack
2013	J	`jnl`	A Discriminative Approach for Unsupervised Clustering of DNA Sequence Motifs. PLoS Comput. Biol. Philip Stegmaier, Alexander E. Kel, Edgar Wingender, Jürgen Borlak
2013	J	`jnl`	Coexpression and coregulation analysis of time-series gene expression data in estrogen-induced breast cancer cell. Algorithms Mol. Biol. Anirban Bhar, Martin Haubrock, Anirban Mukhopadhyay, Ujjwal Maulik, Sanghamitra Bandyopadhyay, Edgar Wingender
2013	J	`jnl`	Connecting high-dimensional mRNA and miRNA expression data for binary medical classification problems. Comput. Methods Programs Biomed. Mathias Fuchs, Tim Beißbarth, Edgar Wingender, Klaus Jung
2013	J	`jnl`	Criteria for an updated Classification of Human transcription factor DNA-binding Domains. J. Bioinform. Comput. Biol. Edgar Wingender
2013	—	`ed.`	German Conference on Bioinformatics 2013, GCB 2013, Göttingen, Germany, September 10-13, 2013 GCB Tim Beißbarth, Martin Kollmar, Andreas Leha, Burkhard Morgenstern, Anne-Kathrin Schultz, Stephan Waack, Edgar Wingender
2013	—	`conf`	Inhomogeneous Parsimonious Markov Models. ECML/PKDD (1) Ralf Eggeling, André Gohr, Pierre-Yves Bourguignon, Edgar Wingender, Ivo Grosse
2013	J	`jnl`	MatrixCatch - a novel tool for the recognition of composite regulatory elements in promoters. BMC Bioinform. Igor V. Deyneko, Alexander E. Kel, Olga V. Kel-Margoulis, Elena V. Deineko, Edgar Wingender, Siegfried Weiss
2013	J	`jnl`	TFClass: an expandable hierarchical classification of human transcription factors. Nucleic Acids Res. Edgar Wingender, Torsten Schoeps, Jürgen Dönitz
2012	—	`conf`	Bioinformatik & Bioinformation: Braunschweig spielt eine führende Rolle. 40 Jahre Informatik @ Braunschweig Dietmar Schomburg, Edgar Wingender
2012	J	`jnl`	The architecture of the gene regulatory networks of different tissues. Bioinform. Jie Li, Xu Hua, Martin Haubrock, Jin Wang, Edgar Wingender
2012	J	`jnl`	Using potential master regulator sites and paralogous expansion to construct tissue-specific transcriptional networks. BMC Syst. Biol. Martin Haubrock, Jie Li, Edgar Wingender
2012	C	`conf`	δ-TRIMAX: Extracting Triclusters and Analysing Coregulation in Time Series Gene Expression Data. WABI Anirban Bhar, Martin Haubrock, Anirban Mukhopadhyay, Ujjwal Maulik, Sanghamitra Bandyopadhyay, Edgar Wingender
2011	J	`jnl`	Regulatory coordination of clustered microRNAs based on microRNA-transcription factor regulatory network. BMC Syst. Biol. Jin Wang, Martin Haubrock, Kunming Cao, Xu Hua, Chenyu Zhang, Edgar Wingender, Jie Li
2010	J	`jnl`	Molecular mechanistic associations of human diseases. BMC Syst. Biol. Philip Stegmaier, Mathias Krull, Nico Voss, Alexander E. Kel, Edgar Wingender
2010	J	`jnl`	Petri Net Applications in Molecular Biology. Silico Biol. Edgar Wingender
2009	J	`jnl`	An approach to evaluate the topological significance of motifs and other patterns in regulatory networks. BMC Syst. Biol. Björn Goemann, Edgar Wingender, Anatolij Potapov
2008	J	`jnl`	Building a knowledge base for systems pathology. Briefings Bioinform. Holger Michael, Jennifer Hogan, Alexander E. Kel, Olga V. Kel-Margoulis, Frank Schacherer, Nico Voss, Edgar Wingender
2008	J	`jnl`	EndoNet: an information resource about regulatory networks of cell-to-cell communication. Nucleic Acids Res. Jürgen Dönitz, Björn Goemann, Muriel Lizé, Holger Michael, Nicole Sasse, Edgar Wingender, Anatolij Potapov
2008	J	`jnl`	The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation. Briefings Bioinform. Edgar Wingender
2008	J	`jnl`	The pairwise disconnectivity index as a new metric for the topological analysis of regulatory networks. BMC Bioinform. Anatolij Potapov, Björn Goemann, Edgar Wingender
2007	J	`jnl`	DEEP - A tool for differential expression effector prediction. Nucleic Acids Res. Jost Degenhardt, Martin Haubrock, Jürgen Dönitz, Edgar Wingender, Torsten Crass
2007	J	`jnl`	Integrating Pathway Data for Systems Pathology. Silico Biol. Edgar Wingender, Jennifer Hogan, Frank Schacherer, Anatolij Potapov, Olga V. Kel-Margoulis
2006	J	`jnl`	Beyond microarrays: Finding key transcription factors controlling signal transduction pathways. BMC Bioinform. Alexander E. Kel, Nico Voss, Ruy Jáuregui, Olga V. Kel-Margoulis, Edgar Wingender
2006	J	`jnl`	Composite Module Analyst: a fitness-based tool for identification of transcription factor binding site combinations. Bioinform. Alexander E. Kel, Tatiana Konovalova, T. Waleev, Evgeny Cheremushkin, Olga V. Kel-Margoulis, Edgar Wingender
2006	J	`jnl`	Composite Module Analyst: identification of transcription factor binding site combinations using genetic algorithm. Nucleic Acids Res. T. Waleev, Dmitry Shtokalo, Tatiana Konovalova, Nico Voss, Evgeny Cheremushkin, Philip Stegmaier, Olga V. Kel-Margoulis, Edgar Wingender, Alexander E. Kel
2006	J	`jnl`	EndoNet: an information resource about endocrine networks. Nucleic Acids Res. Anatolij Potapov, Ines Liebich, Jürgen Dönitz, Knut Schwarzer, Nicole Sasse, Torsten Schoeps, Torsten Crass, Edgar Wingender
2006	J	`jnl`	Evaluating phylogenetic footprinting for human-rodent comparisons. Bioinform. Tilman Sauer, Ekaterina Shelest, Edgar Wingender
2006	J	`jnl`	TRANSFAC Nucleic Acids Res. V. Matys, Olga V. Kel-Margoulis, Ellen Fricke, Ines Liebich, Sigrid Land, A. Barre-Dirrie, Ingmar Reuter, D. Chekmenev, Mathias Krull, Klaus Hornischer, Nico Voss, Philip Stegmaier, Birgit Lewicki-Potapov, H. Saxel, Alexander E. Kel, Edgar Wingender
2006	J	`jnl`	TRANSPATH Nucleic Acids Res. Mathias Krull, Susanne Pistor, Nico Voss, Alexander E. Kel, Ingmar Reuter, Deborah Kronenberg, Holger Michael, Knut Schwarzer, Anatolij Potapov, Claudia Choi, Olga V. Kel-Margoulis, Edgar Wingender
2006	J	`jnl`	TiProD: the Tissue-specific Promoter Database. Nucleic Acids Res. Xin Chen, Jianmin Wu, Klaus Hornischer, Alexander E. Kel, Edgar Wingender
2005	—	`conf`	Composite Module Analyst: A Fitness-Based Tool for Prediction of Transcription Regulation. German Conference on Bioinformatics Alexander E. Kel, Tatiana Konovalova, Tagir F. Valeev, Evgeny Cheremushkin, Olga V. Kel-Margoulis, Edgar Wingender
2004	—	`conf`	Application of Kernel Method to Reveal Subtypes of TF Binding Motifs. Regulatory Genomics Alexander E. Kel, Yuri Tikunov, Nico Voss, Jürgen Borlak, Edgar Wingender
2004	J	`jnl`	Deriving an ontology for human gene expression sources from the CYTOMER? database on human organs and cell types. Silico Biol. Holger Michael, Xin Chen, Ellen Fricke, Martin Haubrock, Remko Ricanek, Edgar Wingender
2004	—	`conf`	From Composite Patters to Pathways - Prediction of Key Regulators of Gene Expression. German Conference on Bioinformatics Alexander E. Kel, Nico Voss, Tatiana Konovalova, Dmitri Tchekmenev, P. Wabnitz, Olga V. Kel-Margoulis, Edgar Wingender
2004	J	`jnl`	Preface - Third "Ontology Workshop on Ontology and Genomes". Silico Biol. Takako Takai-Igarashi, Toshihisa Takagi, Holger Michael, Edgar Wingender
2004	J	`jnl`	Quo Vadis Bioinformatik, neue Konzepte und Arbeitsbereiche (Quo Vadis Bioinformatics - New Concepts and Areas). it Inf. Technol. Holger Karas, Michael Tysiak, Edgar Wingender
2004	J	`jnl`	Recognition of multiple patterns in unaligned sets of sequences: comparison of kernel clustering method with other methods. Bioinform. Alexander E. Kel, Yuri Tikunov, Nico Voss, Edgar Wingender
2004	J	`jnl`	The Helmholtz Network for Bioinformatics: an integrative web portal for bioinformatics resources. Bioinform. Torsten Crass, Iris Antes, Rico Basekow, Peer Bork, Christian Buning, Maik Christensen, Holger Claussen, Christian Ebeling, Peter Ernst, Valérie Gailus-Durner, Karl-Heinz Glatting, Rolf Gohla, Frank Gößling, Korbinian Grote, Karsten R. Heidtke, Alexander Herrmann, Sean O'Keeffe, O. Kießlich, Sven Kolibal, Jan O. Korbel, Thomas Lengauer, Ines Liebich, Mark van der Linden, Hannes Luz, Kathrin Meissner, Christian von Mering, Heinz-Theodor Mevissen, Hans-Werner Mewes, Holger Michael, Martin Mokrejs, Tobias Müller, Heike Pospisil, Matthias Rarey, Jens G. Reich, Ralf Schneider, Dietmar Schomburg, Steffen Schulze-Kremer, Knut Schwarzer, Ingolf Sommer, Stephan Springstubbe, Sándor Suhai, Gnanasekaran Thoppae, Martin Vingron, Jens Warfsmann, Thomas Werner, Daniel Wetzler, Edgar Wingender, Ralf Zimmer
2003	J	`jnl`	Composition-sensitive analysis of the human genome for regulatory signals. Silico Biol. Olga V. Kel-Margoulis, Dmitri Tchekmenev, Alexander E. Kel, Ellen Gößling, Klaus Hornischer, Birgit Lewicki-Potapov, Edgar Wingender
2003	J	`jnl`	MATCHTM: a tool for searching transcription factor binding sites in DNA sequences. Nucleic Acids Res. Alexander E. Kel, Ellen Gößling, Ingmar Reuter, Evgeny Cheremushkin, Olga V. Kel-Margoulis, Edgar Wingender
2003	J	`jnl`	PRODORIC: prokaryotic database of gene regulation. Nucleic Acids Res. Richard Münch, Karsten Hiller, Heiko Barg, Dana Heldt, Simone Linz, Edgar Wingender, Dieter Jahn
2003	J	`jnl`	Prediction of potential C/EBP/NF-kappaB composite elements using matrix-based search methods. Silico Biol. Ekaterina Shelest, Alexander E. Kel, Ellen Gößling, Edgar Wingender
2003	J	`jnl`	Preface: The Second Workshop on Ontology and Genome. Silico Biol. Takako Takai-Igarashi, Toshihisa Takagi, Edgar Wingender
2003	—	`conf`	Recognition of multiple patterns in unaligned sets of sequences. Comparison of kernel clustering method with other methods. German Conference on Bioinformatics Alexander E. Kel, Yuri Tikunov, Nico Voss, Edgar Wingender
2003	J	`jnl`	TRANSFAC®: transcriptional regulation, from patterns to profiles. Nucleic Acids Res. V. Matys, Ellen Fricke, R. Geffers, Ellen Gößling, Martin Haubrock, Reinhard Hehl, Klaus Hornischer, Dagmar Karas, Alexander E. Kel, Olga V. Kel-Margoulis, Dorothee-U. Kloos, Sigrid Land, Birgit Lewicki-Potapov, Holger Michael, Richard Münch, Ingmar Reuter, Stella Rotert, H. Saxel, Maurice Scheer, S. Thiele, Edgar Wingender
2003	J	`jnl`	TRANSPATH, TRANSFAC and CYTOMER as starting points for an ontology of regulatory networks. Silico Biol. Edgar Wingender
2003	J	`jnl`	TRANSPATH: An integrated database on signal transduction and a tool for array analysis. Nucleic Acids Res. Mathias Krull, Nico Voss, Claudia Choi, Susanne Pistor, Anatolij Potapov, Edgar Wingender
2002	Misc	`conf`	Automatic Annotation of Genomic Regulatory Sequences by Searching for Composite Clusters. Pacific Symposium on Biocomputing Olga V. Kel-Margoulis, T. G. Ivanova, Edgar Wingender, Alexander E. Kel
2002	J	`jnl`	S/MARt DB: a database on scaffold/matrix attached regions. Nucleic Acids Res. Ines Liebich, Jürgen Bode, Matthias Frisch, Edgar Wingender
2002	J	`jnl`	TRANSCompel®: a database on composite regulatory elements in eukaryotic genes. Nucleic Acids Res. Olga V. Kel-Margoulis, Alexander E. Kel, Ingmar Reuter, Igor Deineko, Edgar Wingender
2002	J	`jnl`	The German Conference on Bioinformatics 2001. Silico Biol. Edgar Wingender
2001	—	`conf`	-PheGe- a novel concept for in-silico analyses of genotype/phenotype relations. German Conference on Bioinformatics Klaus Seidl, Edgar Wingender
2001	—	`conf`	ClusterScan: A Tool for Automatic Annotation of Genomic Regulatory Sequences by Searching for Composite Clusters. German Conference on Bioinformatics Alexander E. Kel, Olga V. Kel-Margoulis, T. G. Ivanova, Edgar Wingender
2001	—	`ed.`	Computer science and biology: Proceedings of the German Conference on Bioinformatics, GCB 2001, October 7-10, 2001, Braunschweig, Germany German Conference on Bioinformatics Edgar Wingender
2001	—	`conf`	Cytomer: A database on gene expression sources. German Conference on Bioinformatics Ellen Fricke, Sigrid Land, Stella Rotert, Dagmar Karas, Edgar Wingender
2001	—	`conf`	MATCH German Conference on Bioinformatics Ellen Gößling, Olga V. Kel-Margoulis, Alexander E. Kel, Edgar Wingender
2001	—	`conf`	Modeling the Architecture of Regulatory Networks. German Conference on Bioinformatics Anatolij Potapov, Edgar Wingender
2001	—	`conf`	ReAlSplice: A database on regulated alternative splicing. German Conference on Bioinformatics Ines Liebich, Maik Christensen, Edgar Wingender
2001	—	`conf`	TRANSCompel® - a professional database on composite regulatory elements in eukaryotic genes. German Conference on Bioinformatics Olga V. Kel-Margoulis, Igor Deineko, Ingmar Reuter, Edgar Wingender, Alexander E. Kel
2001	—	`conf`	TRANSFAC®_YEAST. German Conference on Bioinformatics Holger Michael, S. Thiele, Edgar Wingender
2001	—	`conf`	TRANSPATH - a database on signal transduction networks. German Conference on Bioinformatics Ulrike Götze, Susanne Pistor, Claudia Choi, Mathias Krull, Frank Schacherer, Nico Voss, Edgar Wingender
2001	—	`conf`	The SMAD-TGF-beta SignallingNetwork: TRANSFAC meets TRANSPATH. German Conference on Bioinformatics Dorothee-U. Kloos, Claudia Choi, Edgar Wingender
2001	J	`jnl`	The TRANSFAC system on gene expression regulation. Nucleic Acids Res. Edgar Wingender, Xin Chen, Ellen Fricke, R. Geffers, Reinhard Hehl, Ines Liebich, Mathias Krull, V. Matys, Holger Michael, R. Ohnhäuser, M. Prüß, Frank Schacherer, S. Thiele, S. Urbach
2001	J	`jnl`	The TRANSPATH signal transduction database: a knowledge base on signal transduction networks. Bioinform. Frank Schacherer, Claudia Choi, Ulrike Götze, Mathias Krull, Susanne Pistor, Edgar Wingender
2001	—	`conf`	The integrated TRANSFAC system as a basis for modeling the architecture of gene regulatory networks. German Conference on Bioinformatics Anatolij Potapov, Klaus Seidl, Maik Christensen, Volker Drewes, Frank Schacherer, Edgar Wingender
2000	J	`jnl`	COMPEL: a database on composite regulatory elements providing combinatorial transcriptional regulation. Nucleic Acids Res. Olga V. Kel-Margoulis, Aida G. Romashchenko, Nikolay A. Kolchanov, Edgar Wingender, Alexander E. Kel
2000	J	`jnl`	In Memory of Dan Prestridge. Silico Biol. Edgar Wingender, Thomas Werner
2000	—	`conf`	Modeling of Gene Regulatory Network of Cell Cycle Control. Role of E2F Feedback Loops. German Conference on Bioinformatics Alexander E. Kel, Igor Deineko, Olga V. Kel-Margoulis, Edgar Wingender, Vadim Ratner
2000	J	`jnl`	TRANSFAC: an integrated system for gene expression regulation. Nucleic Acids Res. Edgar Wingender, Xin Chen, Reinhard Hehl, Holger Karas, Ines Liebich, V. Matys, T. Meinhardt, M. Prüß, Ingmar Reuter, Frank Schacherer
1999	—	`conf`	A database framework for mapping expression patterns. German Conference on Bioinformatics Xin Chen, Andreas W. M. Dress, Holger Karas, Ingmar Reuter, Edgar Wingender
1999	—	`conf`	CYTOMER® : A database on gene expression sources. German Conference on Bioinformatics Xin Chen, Edgar Wingender
1999	—	`conf`	E2F composite units in promoters of cell cycle genes. German Conference on Bioinformatics Alexander E. Kel, Olga V. Kel-Margoulis, Edgar Wingender
1999	J	`jnl`	Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms. Nucleic Acids Res. T. Heinemeyer, Xin Chen, Holger Karas, Alexander E. Kel, Olga V. Kel-Margoulis, Ines Liebich, T. Meinhardt, Ingmar Reuter, Frank Schacherer, Edgar Wingender
1999	J	`jnl`	Integrated databases and computer systems for studying eukaryotic gene expression. Bioinform. Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Anatoly S. Frolov, Elena A. Ananko, Fedor A. Kolpakov, Elena V. Ignatieva, Olga A. Podkolodnaya, T. N. Goryachkovskaya, Irina L. Stepanenko, Tatyana I. Merkulova, V. V. Babenko, Y. V. Ponomarenko, Alexey V. Kochetov, Nikolay L. Podkolodny, Denis G. Vorobiev, Sergey V. Lavryushev, Dmitry A. Grigorovich, Yury V. Kondrakhin, Luciano Milanesi, Edgar Wingender, Victor V. Solovyev, G. Christian Overton
1999	—	`conf`	PathoDB - a database that combines pathological data with molecular information. German Conference on Bioinformatics T. Meinhardt, M. Prüß, Edgar Wingender
1999	—	`conf`	S/MARt DB: A database on chromatin organizing S/MAR regions. German Conference on Bioinformatics Ines Liebich, Jürgen Bode, Edgar Wingender
1999	—	`conf`	The Transpath Signal Transduction Database. German Conference on Bioinformatics Frank Schacherer, Edgar Wingender
1998	—	`conf`	A hierarchy of databases for modeling gene regulatory mechanisms. German Conference on Bioinformatics Edgar Wingender, Xin Chen, T. Heinemeyer, Alexander E. Kel, Ines Liebich, T. Meinhardt
1998	—	`conf`	Combinatorial identification of promoters induced upon immune cell activation. German Conference on Bioinformatics Alexander E. Kel, Olga V. Kel-Margoulis, Vladimir N. Babenko, Nikolay A. Kolchanov, Edgar Wingender
1998	J	`jnl`	Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL. Nucleic Acids Res. T. Heinemeyer, Edgar Wingender, Ingmar Reuter, Henning Hermjakob, Alexander E. Kel, Olga V. Kel-Margoulis, Elena V. Ignatieva, Elena A. Ananko, Olga A. Podkolodnaya, Fedor A. Kolpakov, Nikolay L. Podkolodny, Nikolay A. Kolchanov
1998	—	`conf`	Eine Hierarchie molekularbiologischer Datenbanken zur Beschreibung genregulatorischer Prozesse (Zusammenfassung). Workshop Data Mining und Data Warehousing Edgar Wingender
1998	A	`conf`	GenExpress: A Computer System for Description, Analysis and Recognition of Regulatory Sequences in Eukaryotic Genome. ISMB Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Alexander E. Kel, Yury V. Kondrakhin, Anatoly S. Frolov, Fedor A. Kolpakov, T. N. Goryachkovskaya, O. V. Kel, Elena A. Ananko, Elena V. Ignatieva, Olga A. Podkolodnaya, Vladimir N. Babenko, Irina L. Stepanenko, Aida G. Romashchenko, Tatyana I. Merkulova, Denis G. Vorobiev, Sergey V. Lavryushev, Y. V. Ponomarenko, Alexey V. Kochetov, G. B. Kolesov, Victor V. Solovyev, Luciano Milanesi, Nikolay L. Podkolodny, Edgar Wingender, T. Heinemeyer
1998	J	`jnl`	ISB: Just another journal? Silico Biol. Edgar Wingender
1998	J	`jnl`	Transcription regulatory region analysis using signal detection and fuzzy clustering. Bioinform. L. Pickert, Ingmar Reuter, Frank Klawonn, Edgar Wingender
1997	—	`conf`	Identification of the significant conformational features of functional sites in B-DNA. German Conference on Bioinformatics Mikhail P. Ponomarenko, Julia V. Ponomarenko, Alexander E. Kel, Nikolay A. Kolchanov, N. Karas, Edgar Wingender, Heinz Sklenar
1997	J	`jnl`	TRANSFAC, TRRD and COMPEL: towards a federated database system on transcriptional regulation. Nucleic Acids Res. Edgar Wingender, Alexander E. Kel, Olga V. Kel-Margoulis, Holger Karas, T. Heinemeyer, P. Dietze, Rainer Knüppel, Aida G. Romashchenko, Nikolay A. Kolchanov
1997	—	`conf`	Transcription regulation regions revealed by Signal detection and fuzzy clusterfng. German Conference on Bioinformatics L. Pickert, Ingmar Reuter, Frank Klawonn, Edgar Wingender
1996	—	`conf`	Combined Approaches for the Detection of Regulatory Genomic Signals. German Conference on Bioinformatics Edgar Wingender, Holger Karas, P. Dietze, Rainer Knüppel, Heinz Sklenar
1996	J	`jnl`	Combining structural analysis of DNA with search routines for the detection of transcription regulatory elements. Comput. Appl. Biosci. Holger Karas, Rainer Knüppel, Wolfgang Schulz, Heinz Sklenar, Edgar Wingender
1996	J	`jnl`	Modellierung der Genregulation in Eukaryonten. Informationstechnik Tech. Inform. Rainer Knüppel, Edgar Wingender
1996	J	`jnl`	TRANSFAC: a database on transcription factors and their DNA binding sites. Nucleic Acids Res. Edgar Wingender, P. Dietze, Holger Karas, Rainer Knüppel
1996	—	`conf`	TRRD and COMPEL Databases an Transcription Linked to TRANSFAC as Tools for Analysis and Recognition of Regulatory Sequences. German Conference on Bioinformatics Alexander E. Kel, O. V. Kel, I. V. Ischenko, Nikolay A. Kolchanov, Holger Karas, Edgar Wingender, Heinz Sklenar
1996	—	`conf`	TRRD and COMPEL Databases on Transcription Linked to TRANSFAC as Tools for Analysis and Recognition of Regulatory Sequences. German Conference on Bioinformatics - Selected Papers Alexander E. Kel, O. V. Kel, Oleg V. Vishnevsky, Mikhail P. Ponomarenko, I. V. Ischenko, Holger Karas, Edgar Wingender, Nikolay A. Kolchanov, Heinz Sklenar
1995	A	`conf`	Computer Tool FUNSITE for Analysis of Eukaryotic Regulatory Genomic Sequences. ISMB Alexander E. Kel, Yury V. Kondrakhin, Ph. A. Kolpakov, O. V. Kel, Aida G. Romashchenko, Edgar Wingender, Luciano Milanesi, Nikolay A. Kolchanov
1994	J	`jnl`	TRANSFAC Retrieval Program: A Network Model Database of Eukaryotic Transcription Regulating Sequences and Proteins. J. Comput. Biol. Rainer Knüppel, P. Dietze, W. Lehnberg, Kornelie Frech, Edgar Wingender