Ed S. Lein

11 papers B 2Misc 1Journal 7Unranked 1
YearRankTypeTitle / Venue / Authors
2025 B conf
Cytosplore EvoViewer: Visual Analytics of Conserved Evolutionary Patterns in multi-species single-cell sequencing data.
PacificVis
Soumyadeep Basu, Morgan Wirthlin, Jeroen Eggermont, Thomas Kroes, Boudewijn P. F. Lelieveldt, Ed S. Lein, Trygve E. Bakken, Thomas Höllt
2023 — conf
Cytosplore Simian Viewer: Visual Exploration for Multi-Species Single-Cell RNA Sequencing Data.
VCBM
Soumyadeep Basu, Jeroen Eggermont, Thomas Kroes, Nikolas Jorstad, Trygve E. Bakken, Ed S. Lein, Boudewijn P. F. Lelieveldt, Thomas Höllt
2021 J jnl
FR-Match: robust matching of cell type clusters from single cell RNA sequencing data using the Friedman-Rafsky non-parametric test.
Briefings Bioinform.
Yun Zhang, Brian D. Aevermann, Trygve E. Bakken, Jeremy A. Miller, Rebecca D. Hodge, Ed S. Lein, Richard H. Scheuermann
2018 J jnl
Joint registration and synthesis using a probabilistic model for alignment of MRI and histological sections.
CoRR
Juan Eugenio Iglesias, Marc Modat, Loïc Peter, Allison Stevens, Roberto Annunziata, Tom Vercauteren, Ed S. Lein, Bruce Fischl, Sébastien Ourselin
2018 J jnl
Joint registration and synthesis using a probabilistic model for alignment of MRI and histological sections.
Medical Image Anal.
Juan Eugenio Iglesias, Marc Modat, Loïc Peter, Allison Stevens, Roberto Annunziata, Tom Vercauteren, Ed S. Lein, Bruce Fischl, Sébastien Ourselin
2017 J jnl
Cell type discovery and representation in the era of high-content single cell phenotyping.
BMC Bioinform.
Trygve E. Bakken, Lindsay G. Cowell, Brian D. Aevermann, Mark Novotny, Rebecca D. Hodge, Jeremy A. Miller, Alexandra Lee, Ivan Chang, Jamison M. McCorrison, Bali Pulendran, Yu Qian, Nicholas J. Schork, Roger S. Lasken, Ed S. Lein, Richard H. Scheuermann
2017 J jnl
Fast assembling of neuron fragments in serial 3D sections.
Brain Informatics
Hanbo Chen, Daniel Maxim Iascone, Nuno Maçarico da Costa, Ed S. Lein, Tianming Liu, Hanchuan Peng
2017 Misc conf
Production of a Preliminary Quality Control Pipeline for Single Nuclei RNA-Seq and Its Application in the Analysis of Cell Type Diversity of Post-Mortem Human Brain Neocortex.
PSB
Brian D. Aevermann, Jamison M. McCorrison, Pratap Venepally, Rebecca D. Hodge, Trygve E. Bakken, Jeremy A. Miller, Mark Novotny, Danny N. Tran, Francisco Diez-Fuertes, Lena Christiansen, Fan Zhang, Frank Steemers, Roger S. Lasken, Ed S. Lein, Nicholas J. Schork, Richard H. Scheuermann
2011 J jnl
Multi-scale correlation structure of gene expression in the brain.
Neural Networks
Michael Hawrylycz, Lydia Ng, Damon Page, John Morris, Christopher Lau, Sky Faber, Vance Faber, Susan Sunkin, Vilas Menon, Ed S. Lein, Allan Jones
2007 J jnl
Neuroinformatics for Genome-Wide 3-D Gene Expression Mapping in the Mouse Brain.
IEEE ACM Trans. Comput. Biol. Bioinform.
Lydia Ng, Sayan D. Pathak, Chihchau Kuan, Christopher Lau, Hong-wei Dong, Andrew Sodt, Chinh Dang, Brian B. Avants, Paul A. Yushkevich, James C. Gee, David R. Haynor, Ed S. Lein, Allan Jones, Michael Hawrylycz
2005 B conf
Gene expression detection and expression visualization in in situ hybridized cross-sectional images of the mouse brain.
Image Processing
Sayan Pathak, Ed S. Lein, Simon Smith, David R. Haynor, Michael Hawrylycz