Duccio Cavalieri

13 papers Journal 10Unranked 2
YearRankTypeTitle / Venue / Authors
2024 J jnl
OBO Foundry food ontology interconnectivity.
Semantic Web
Damion M. Dooley, Liliana Andrés-Hernández, Georgeta Bordea, Leigh Carmody, Duccio Cavalieri, Lauren E. Chan, Pol Castellano-Escuder, Carl Lachat, Fleur Mougin, Francesco Vitali, Chen Yang, Magalie Weber, Hande Küçük-McGinty, Matthew Lange
2022 — ed.
Proceedings of the Joint Ontology Workshops 2022 Episode VIII: The Svear Sommar of Ontology, Jönköping, Sweden, August 15-19, 2022.
JOWO
Tiago Prince Sales, Maria M. Hedblom, He Tan, Guendalina Righetti, Oliver Kutz, Martin Glauer, Janna Hastings, Till Mossakowski, Fabian Neuhaus, Lucía Gómez Álvarez, Rafael Peñaloza, Srdjan Vesic, Claudenir Morais Fonseca, Jona Thai, Stefano Borgo, Damion M. Dooley, Rhiannon Cameron, Lauren E. Chan, Duccio Cavalieri, Robert Warren, Hande Küçük-McGinty, Matthew Lange, Fernanda Forea, Francesco Vitali, Bart Gajderowicz, Daniela Rosu, Aldo Gangemi, Robert Porzel, Daniel Beßler, Mihai Pomarlan, Mohammed Diab, Alberto Olivares Alarcos
2021 — conf
OBO Foundry Food Ontology Interconnectivity.
JOWO
Damion M. Dooley, Liliana Andrés-Hernández, Georgeta Bordea, Leigh Carmody, Duccio Cavalieri, Lauren E. Chan, Pol Castellano-Escuder, Carl Lachat, Fleur Mougin, Francesco Vitali, Chen Yang, Magalie Weber, Matthew Lange
2021 — conf
ONS Modeling of Diet Concepts: Further Development Required by the Objective Definition of "Western Diet".
JOWO
Ana Reis-Costa, Francesco Vitali, Agnese Gori, Giovanni Bacci, Carlotta De Filippo, Duccio Cavalieri
2017 J jnl
Pathway Inspector: a pathway based web application for RNAseq analysis of model and non-model organisms.
Bioinform.
Luca Bianco, Samantha Riccadonna, Enrico Lavezzo, Marco Falda, Elide Formentin, Duccio Cavalieri, Stefano Toppo, Paolo Fontana
2015 J jnl
Explaining Diversity in Metagenomic Datasets by Phylogenetic-Based Feature Weighting.
PLoS Comput. Biol.
Davide Albanese, Carlotta De Filippo, Duccio Cavalieri, Claudio Donati
2013 J jnl
Pathway Processor 2.0: a web resource for pathway-based analysis of high-throughput data.
Bioinform.
Luca Beltrame, Luca Bianco, Paolo Fontana, Duccio Cavalieri
2012 J jnl
Bioinformatic approaches for functional annotation and pathway inference in metagenomics data.
Briefings Bioinform.
Carlotta De Filippo, Matteo Ramazzotti, Paolo Fontana, Duccio Cavalieri
2012 J jnl
graphite - a Bioconductor package to convert pathway topology to gene network.
BMC Bioinform.
Gabriele Sales, Enrica Calura, Duccio Cavalieri, Chiara Romualdi
2011 J jnl
Knowledge sharing and collaboration in translational research, and the DC-THERA Directory.
Briefings Bioinform.
Andrea Splendiani, Michaela Gündel, Jonathan M. Austyn, Duccio Cavalieri, Ciro Scognamiglio, Marco Brandizi
2011 J jnl
The Biological Connection Markup Language: a SBGN-compliant format for visualization, filtering and analysis of biological pathways.
Bioinform.
Luca Beltrame, Enrica Calura, Razvan R. Popovici, Lisa Rizzetto, Damariz Rivero Guedez, Michele Donato, Chiara Romualdi, Sorin Draghici, Duccio Cavalieri
2007 J jnl
Eu.Gene Analyzer a tool for integrating gene expression data with pathway databases.
Bioinform.
Duccio Cavalieri, Cinzia Castagnini, Simona Toti, Karolina Maciag, Thomas Kelder, Luca Gambineri, Samuele Angioli, Piero Dolara
2002 J jnl
An open letter to the scientific journals.
Bioinform.
Catherine A. Ball, Gavin Sherlock, Helen E. Parkinson, Philippe Rocca-Serra, Catherine Brooksbank, Helen C. Causton, Duccio Cavalieri, Terry Gaasterland, Pascal Hingamp, Frank C. P. Holstege, Martin Ringwald, Paul T. Spellman, Christian J. Stoeckert Jr., Jason E. Stewart, Ronald C. Taylor, Alvis Brazma, John Quackenbush