Dongqing Wei

24 papers Journal 20Unranked 4
YearRankTypeTitle / Venue / Authors
2025 J jnl
Deciphering progressive lesion areas in breast cancer spatial transcriptomics via TGR-NMF.
Briefings Bioinform.
Juntao Li, Shan Xiang, Dongqing Wei
2025 J jnl
Dynamic modeling of antibody repertoire reshaping in response to viral infections.
Comput. Biol. Medicine
Zhaobin Xu, Qingzhi Peng, Junxiao Xu, Hongmei Zhang, Jian Song, Dongqing Wei, Qiangcheng Zeng
2025 J jnl
ESM2_AMP: an interpretable framework for protein-protein interactions prediction and biological mechanism discovery.
Briefings Bioinform.
Yawen Sun, Rui Wang, Zeyu Luo, Lejia Tan, Junhao Liu, Ruimeng Li, Dongqing Wei, Yu-Juan Zhang
2025 J jnl
Enhancing Drug Synergy Combination: Integrating Graph Transformers and BiLSTM for Accurate Drug Synergy Prediction.
IEEE J. Biomed. Health Informatics
Bin Sun, Haoze Du, Shumei Hou, Qingkai Hu, Xiaoxiao Pang, Dongqing Wei, Xianfang Wang
2025 J jnl
HGCMLDA: predicting lncRNA-disease associations using hypergraph contrastive learning and multi-scale attentional feature fusion.
Briefings Bioinform.
Zequn Zhang, Huijun Li, Yuxi Chen, Xiaoli Li, Dongqing Wei, Hongyan Wu
2025 J jnl
Preventing Model Collapse via Contraction-Conditioned Neural Filters.
CoRR
Zongjian Han, Yiran Liang, Ruiwen Wang, Yiwei Luo, Yilin Huang, Xiaotong Song, Dongqing Wei
2025 J jnl
Safeguarding ISAC Performance in Low-Altitude Wireless Networks Under Channel Access Attack.
CoRR
Jiacheng Wang, Jialing He, Geng Sun, Zehui Xiong, Dusit Niyato, Shiwen Mao, Dongqing Wei, Tao Xiang
2025 J jnl
Towards interpretable drug interaction prediction
PeerJ Comput. Sci.
Rongpei Li, Yufang Zhang, Heqi Sun, Shenggeng Lin, Guihua Jia, Yitian Fang, Chen Zhang, Xiaotong Song, Jianwei Zhao, Lyubin Hu, Yajing Yuan, Xueying Mao, Jiayi Li, Aman Chandra Kaushik, Dandan An, Dongqing Wei
2024 — conf
The Algorithms of Predicting DNA Binding Site with Combined Feature Encoding and Optimum Decision.
BCB
Zhendong Liu, Jun Liu, Dongqing Wei, Yanjie Wei, Rongjun Man
2023 — conf
A Novel Deep Learning Approach Featuring Graph-Based Algorithm for Cell Segmentation and Tracking.
BIBM
Keliang Zhao, Jovial Niyogisubizo, Linxia Xiao, Yi Pan, Dongqing Wei, Didi Rosiyadi, Yanjie Wei
2023 J jnl
AdaPPI: identification of novel protein functional modules via adaptive graph convolution networks in a protein-protein interaction network.
Briefings Bioinform.
Hongwei Chen, Yunpeng Cai, Chaojie Ji, Gurudeeban Selvaraj, Dongqing Wei, Hongyan Wu
2023 J jnl
More or less deadly? A mathematical model that predicts SARS-CoV-2 evolutionary direction.
Comput. Biol. Medicine
Zhaobin Xu, Dongqing Wei, Qiangcheng Zeng, Hongmei Zhang, Yinghui Sun, Jacques Demongeot
2023 J jnl
Running ahead of evolution - AI-based simulation for predicting future high-risk SARS-CoV-2 variants.
Int. J. High Perform. Comput. Appl.
Jie Chen, Zhiwei Nie, Yu Wang, Kai Wang, Fan Xu, Zhiheng Hu, Bing Zheng, Zhennan Wang, Guoli Song, Jingyi Zhang, Jie Fu, Xiansong Huang, Zhongqi Wang, Zhixiang Ren, Qiankun Wang, Daixi Li, Dongqing Wei, Bin Zhou, Chao Yang, Yonghong Tian
2021 — conf
CFCN: A Multi-scale Fully Convolutional Network with Dilated Convolution for Nuclei Classification and Localization.
ISBRA
Bin Xin, Yaning Yang, Dongqing Wei, Shaoliang Peng
2021 J jnl
Exosomal ncRNAs profiling of mycobacterial infection identified miRNA-185-5p as a novel biomarker for tuberculosis.
Briefings Bioinform.
Aman Chandra Kaushik, Qiqi Wu, Li Lin, Haibo Li, Longqi Zhao, Zilu Wen, Yanzheng Song, Qihang Wu, Jin Wang, Xiaokui Guo, Hualin Wang, Xiaoli Yu, Dongqing Wei, Shulin Zhang
2020 J jnl
High-Scalable Collaborated Parallel Framework for Large-Scale Molecular Dynamic Simulation on Tianhe-2 Supercomputer.
IEEE ACM Trans. Comput. Biol. Bioinform.
Shaoliang Peng, Xiaoyu Zhang, Wenhe Su, Dong Dong, Yutong Lu, Xiangke Liao, Kai Lu, Canqun Yang, Jie Liu, Weiliang Zhu, Dongqing Wei
2016 — conf
mAMBER: A CPU/MIC collaborated parallel framework for AMBER on Tianhe-2 supercomputer.
BIBM
Shaoliang Peng, Xiaoyu Zhang, Yutong Lu, Xiangke Liao, Kai Lu, Canqun Yang, Jie Liu, Weiliang Zhu, Dongqing Wei
2015 J jnl
Personalized clinical data screening: Special issue on health informatics.
Comput. Biol. Medicine
Miaomiao Zhao, Yunpeng Cai, Jiankui He, Guanyu Wang, Dongqing Wei, Yanjie Wei, Caiwan Zhang, Fengfeng Zhou
2013 J jnl
Impact of Resistance Mutations on Inhibitor Binding to HIV-1 Integrase.
J. Chem. Inf. Model.
Qi Chen, John K. Buolamwini, Jeremy C. Smith, Aixiu Li, Qin Xu, Xiaolin Cheng, Dongqing Wei
2012 J jnl
Adaptive Visual and Auditory Map Alignment in Barn Owl Superior Colliculus and Its Neuromorphic Implementation.
IEEE Trans. Neural Networks Learn. Syst.
Juan Huo, Alan F. Murray, Dongqing Wei
2010 J jnl
Molecular Dynamics Studies on T1 Lipase: Insight into a Double-Flap Mechanism.
J. Chem. Inf. Model.
Ying Wang, Dongqing Wei, Jing-Fang Wang
2010 J jnl
The computational model to predict accurately inhibitory activity for inhibitors towardsCYP3A4.
Comput. Biol. Medicine
Zhiyuan Xie, Tao Zhang, Jing-Fang Wang, Kuo-Chen Chou, Dongqing Wei
2005 J jnl
Assessment of chemical libraries for their druggability.
Comput. Biol. Chem.
Suzanne W. Sirois, George E. Hatzakis, Dongqing Wei, Qishi Du, Kuo-Chen Chou
2004 J jnl
Virtual Screening for SARS-CoV Protease Based on KZ7088 Pharmacophore Points.
J. Chem. Inf. Model.
Suzanne W. Sirois, Dongqing Wei, Qishi Du, Kuo-Chen Chou