Dong-Yup Lee

17 papers Journal 17
YearRankTypeTitle / Venue / Authors
2018 J jnl
Genome-scale model-driven strain design for dicarboxylic acid production in Yarrowia lipolytica.
BMC Syst. Biol.
Pranjul Mishra, Na-Rae Lee, Meiyappan Lakshmanan, Minsuk Kim, Byung-Gee Kim, Dong-Yup Lee
2017 J jnl
BeReTa: a systematic method for identifying target transcriptional regulators to enhance microbial production of chemicals.
Bioinform.
Minsuk Kim, Gwanggyu Sun, Dong-Yup Lee, Byung-Gee Kim
2015 J jnl
Flux-sum analysis identifies metabolite targets for strain improvement.
BMC Syst. Biol.
Meiyappan Lakshmanan, Tae Yong Kim, Bevan Kai-Sheng Chung, Sang Yup Lee, Dong-Yup Lee
2015 J jnl
SynLinker: an integrated system for designing linkers and synthetic fusion proteins.
Bioinform.
Chengcheng Liu, Ju Xin Chin, Dong-Yup Lee
2014 J jnl
Codon Optimization OnLine (COOL): a web-based multi-objective optimization platform for synthetic gene design.
Bioinform.
Ju Xin Chin, Bevan Kai-Sheng Chung, Dong-Yup Lee
2014 J jnl
Software applications for flux balance analysis.
Briefings Bioinform.
Meiyappan Lakshmanan, Geoffrey Koh, Bevan Chung, Dong-Yup Lee
2013 J jnl
Cofactor Modification Analysis: a Computational Framework to Identify cofactor specificity Engineering targets for strain Improvement.
J. Bioinform. Comput. Biol.
Meiyappan Lakshmanan, Bevan Kai-Sheng Chung, Chengcheng Liu, Seon-Won Kim, Dong-Yup Lee
2012 J jnl
Computational codon optimization of synthetic gene for protein expression.
BMC Syst. Biol.
Bevan Chung, Dong-Yup Lee
2011 J jnl
Integrative analysis workflow for the structural and functional classification of C-type lectins.
BMC Bioinform.
Geoffrey Koh, Ariana Low, Daren Poh, Yujian Yao, Say Ng, Victor Wong, Vincent Vagenende, Kong-Peng Lam, Dong-Yup Lee
2011 J jnl
Mathematical modeling and sensitivity analysis of the integrated TNFα-mediated apoptotic pathway for identifying key regulators.
Comput. Biol. Medicine
Geoffrey Koh, Dong-Yup Lee
2009 J jnl
Flux-sum analysis: a metabolite-centric approach for understanding the metabolic network.
BMC Syst. Biol.
Bevan Chung, Dong-Yup Lee
2009 J jnl
WEbcoli: an interactive and asynchronous web application for
Bioinform.
Tae-Sung Jung, Hock Chuan Yeo, Satty G. Reddy, Wan-Sup Cho, Dong-Yup Lee
2009 J jnl
Web-based applications for building, managing and analysing kinetic models of biological systems.
Briefings Bioinform.
Dong-Yup Lee, Rajib Saha, Faraaz Noor Khan Yusufi, Wonjun Park, Iftekhar A. Karimi
2006 J jnl
WebCell: a web-based environment for kinetic modeling and dynamic simulation of cellular networks.
Bioinform.
Dong-Yup Lee, Choamun Yun, Ayoun Cho, Bo Kyeng Hou, Sunwon Park, Sang Yup Lee
2005 J jnl
MFAML: a standard data structure for representing and exchanging metabolic flux models.
Bioinform.
Hongseok Yun, Dong-Yup Lee, Joonwoo Jeong, Seunghyun Lee, Sang Yup Lee
2004 J jnl
BioSilico: an integrated metabolic database system.
Bioinform.
Bo Kyeng Hou, Jin Sik Kim, Ji Hoon Jun, Dong-Yup Lee, Yong Wook Kim, Sujin Chae, Mira Roh, Yong-Ho In, Sang Yup Lee
2003 J jnl
MetaFluxNet: the management of metabolic reaction information and quantitative metabolic flux analysis.
Bioinform.
Dong-Yup Lee, Hongseok Yun, Sunwon Park, Sang Yup Lee