Dominik Gront

15 papers Journal 15
YearRankTypeTitle / Venue / Authors
2021 J jnl
VisuaLife: library for interactive visualization in rich web applications.
Bioinform.
Justyna Krys, Dominik Gront
2020 J jnl
Better together: Elements of successful scientific software development in a distributed collaborative community.
PLoS Comput. Biol.
Julia Koehler Leman, Brian D. Weitzner, P. Douglas Renfrew, Steven M. Lewis, Rocco Moretti, Andrew M. Watkins, Vikram Khipple Mulligan, Sergey Lyskov, Jared Adolf-Bryfogle, Jason W. Labonte, Justyna Krys, RosettaCommons Consortium, Christopher Bystroff, William R. Schief, Dominik Gront, Ora Schueler-Furman, David Baker, Philip Bradley, Roland L. Dunbrack Jr., Tanja Kortemme, Andrew Leaver-Fay, Charlie E. M. Strauss, Jens Meiler, Brian Kuhlman, Jeffrey J. Gray, Richard Bonneau
2020 J jnl
Practical Considerations for Atomistic Structure Modeling with Cryo-EM Maps.
J. Chem. Inf. Model.
Doo Nam Kim, Dominik Gront, Karissa Y. Sanbonmatsu
2014 J jnl
BioShell-Threading: versatile Monte Carlo package for protein 3D threading.
BMC Bioinform.
Pawel Gniewek, Andrzej Kolinski, Andrzej Kloczkowski, Dominik Gront
2012 J jnl
BioShell Threader: protein homology detection based on sequence profiles and secondary structure profiles.
Nucleic Acids Res.
Dominik Gront, Maciej Blaszczyk, Piotr Wojciechowski, Andrzej Kolinski
2012 J jnl
Optimization of Profile-to-Profile Alignment Parameters for One-Dimensional Threading.
J. Comput. Biol.
Pawel Gniewek, Andrzej Kolinski, Dominik Gront
2008 J jnl
Fast and accurate methods for predicting short-range constraints in protein models.
J. Comput. Aided Mol. Des.
Dominik Gront, Andrzej Kolinski
2008 J jnl
Utility library for structural bioinformatics.
Bioinform.
Dominik Gront, Andrzej Kolinski
2007 J jnl
Backbone building from quadrilaterals: A fast and accurate algorithm for protein backbone reconstruction from alpha carbon coordinates.
J. Comput. Chem.
Dominik Gront, Sebastian Kmiecik, Andrzej Kolinski
2007 J jnl
Comparative modeling without implicit sequence alignments.
Bioinform.
Andrzej Kolinski, Dominik Gront
2007 J jnl
T-Pile - a package for thermodynamic calculations for biomolecules.
Bioinform.
Dominik Gront, Andrzej Kolinski
2006 J jnl
BioShell - a package of tools for structural biology computations.
Bioinform.
Dominik Gront, Andrzej Kolinski
2005 J jnl
A new approach to prediction of short-range conformational propensities in proteins.
Bioinform.
Dominik Gront, Andrzej Kolinski
2005 J jnl
HCPM - program for hierarchical clustering of protein models.
Bioinform.
Dominik Gront, Andrzej Kolinski
2005 J jnl
Protein structure prediction by tempering spatial constraints.
J. Comput. Aided Mol. Des.
Dominik Gront, Andrzej Kolinski, Ulrich H. E. Hansmann