Dmitry Antipov

12 papers B 2Journal 10
YearRankTypeTitle / Venue / Authors
2020 J jnl
Extending rnaSPAdes functionality for hybrid transcriptome assembly.
BMC Bioinform.
Andrey D. Prjibelski, Giuseppe D. Puglia, Dmitry Antipov, Elena Bushmanova, Daniela Giordano, Alla Mikheenko, Domenico Vitale, Alla L. Lapidus
2020 J jnl
Metaviral SPAdes: assembly of viruses from metagenomic data.
Bioinform.
Dmitry Antipov, Mikhail Raiko, Alla L. Lapidus, Pavel A. Pevzner
2020 J jnl
SPAligner: alignment of long diverged molecular sequences to assembly graphs.
BMC Bioinform.
Tatiana Dvorkina, Dmitry Antipov, Anton I. Korobeynikov, Sergey Nurk
2018 J jnl
Versatile genome assembly evaluation with QUAST-LG.
Bioinform.
Alla Mikheenko, Andrey D. Prjibelski, Vladislav Saveliev, Dmitry Antipov, Alexey A. Gurevich
2016 J jnl
hybridSPAdes: an algorithm for hybrid assembly of short and long reads.
Bioinform.
Dmitry Antipov, Anton I. Korobeynikov, Jeffrey S. McLean, Pavel A. Pevzner
2016 J jnl
plasmidSPAdes: assembling plasmids from whole genome sequencing data.
Bioinform.
Dmitry Antipov, Nolan Hartwick, Max W. Shen, Mikhail Raiko, Alla L. Lapidus, Pavel A. Pevzner
2016 J jnl
rnaQUAST: a quality assessment tool for
Bioinform.
Elena Bushmanova, Dmitry Antipov, Alla L. Lapidus, Vladimir Suvorov, Andrey D. Prjibelski
2013 B conf
Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads.
RECOMB
Sergey Nurk, Anton Bankevich, Dmitry Antipov, Alexey A. Gurevich, Anton I. Korobeynikov, Alla L. Lapidus, Andrey D. Prjibelsky, Alex Pyshkin, Alexander Sirotkin, Yakov Sirotkin, Ramunas Stepanauskas, Jeffrey S. McLean, Roger Lasken, Scott R. Clingenpeel, Tanja Woyke, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner
2013 J jnl
Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products.
J. Comput. Biol.
Sergey Nurk, Anton Bankevich, Dmitry Antipov, Alexey A. Gurevich, Anton I. Korobeynikov, Alla L. Lapidus, Andrey D. Prjibelski, Alex Pyshkin, Alexander Sirotkin, Yakov Sirotkin, Ramunas Stepanauskas, Scott R. Clingenpeel, Tanja Woyke, Jeffrey S. McLean, Roger Lasken, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner
2013 J jnl
Pathset Graphs: A Novel Approach for Comprehensive Utilization of Paired Reads in Genome Assembly.
J. Comput. Biol.
Son K. Pham, Dmitry Antipov, Alexander Sirotkin, Glenn Tesler, Pavel A. Pevzner, Max A. Alekseyev
2012 B conf
Pathset Graphs: A Novel Approach for Comprehensive Utilization of Paired Reads in Genome Assembly.
RECOMB
Son K. Pham, Dmitry Antipov, Alexander Sirotkin, Glenn Tesler, Pavel A. Pevzner, Max A. Alekseyev
2012 J jnl
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing.
J. Comput. Biol.
Anton Bankevich, Sergey Nurk, Dmitry Antipov, Alexey A. Gurevich, Mikhail Dvorkin, Alexander S. Kulikov, Valery M. Lesin, Sergey I. Nikolenko, Son K. Pham, Andrey D. Prjibelski, Alex Pyshkin, Alexander Sirotkin, Nikolay Vyahhi, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner