Dmitry A. Afonnikov

11 papers B 1Journal 9Unranked 1
YearRankTypeTitle / Venue / Authors
2024 J jnl
Plant Detection in RGB Images from Unmanned Aerial Vehicles Using Segmentation by Deep Learning and an Impact of Model Accuracy on Downstream Analysis.
J. Imaging
Mikhail V. Kozhekin, Mikhail A. Genaev, Evgenii G. Komyshev, Zakhar A. Zavyalov, Dmitry A. Afonnikov
2017 J jnl
Identification of residues of the archaeal RNA-binding Nip7 proteins specific to environmental conditions.
J. Bioinform. Comput. Biol.
Kirill E. Medvedev, Nikolay A. Kolchanov, Dmitry A. Afonnikov
2017 J jnl
Orthoscape: a cytoscape application for grouping and visualization KEGG based gene networks by taxonomy and homology principles.
BMC Bioinform.
Zakhar S. Mustafin, Sergey A. Lashin, Yury G. Matushkin, Konstantin V. Gunbin, Dmitry A. Afonnikov
2012 J jnl
Computer System for Analysis of Molecular Evolution Modes (SAMEM): Analysis of molecular evolution modes at deep inner branches of the phylogenetic tree.
Silico Biol.
Konstantin V. Gunbin, Valentin V. Suslov, Mikhail A. Genaev, Dmitry A. Afonnikov
2012 J jnl
Computer and Statistical Analysis of Transcription Factor Binding and Chromatin Modifications by ChIP-seq data in Embryonic Stem Cell.
J. Integr. Bioinform.
Yuriy L. Orlov, Han Xu, Dmitry A. Afonnikov, Bing Lim, Jian-Chien Heng, Ping Yuan, Ming Chen, Junli Yan, Neil D. Clarke, Nina Orlova, Mikael Huss, Konstantin V. Gunbin, Nikolay Podkolodnyy, Huck-Hui Ng
2007 J jnl
The Evolution of the Hh-Signaling Pathway Genes: A Computer-Assisted Study.
Silico Biol.
Konstantin V. Gunbin, Dmitry A. Afonnikov, Nikolay A. Kolchanov
2007 B conf
The Location of the Gene Regions Under Selective Pressure: Plato Algorithm Parallelization.
PaCT
Yuri Vyatkin, Konstantin V. Gunbin, Alexey V. Snytnikov, Dmitry A. Afonnikov
2004 J jnl
CRASP: a program for analysis of coordinated substitutions in multiple alignments of protein sequences.
Nucleic Acids Res.
Dmitry A. Afonnikov, Nikolay A. Kolchanov
2002 J jnl
ASPD (Artificially Selected Proteins/Peptides Database): a database of proteins and peptides evolved in vitro.
Nucleic Acids Res.
Vadim P. Valuev, Dmitry A. Afonnikov, Mikhail P. Ponomarenko, Luciano Milanesi, Nikolay A. Kolchanov
2001 J jnl
Detection of conserved physico-chemical characteristics of proteins by analyzing clusters of positions with co-ordinated substitutions.
Bioinform.
Dmitry A. Afonnikov, Dmitry Yu. Oshchepkov, Nikolay A. Kolchanov
1997 — conf
Detecting direct correlations between positions in multiple alignments of amino acid sequences.
German Conference on Bioinformatics
Dmitry A. Afonnikov, Yury V. Kondrakhin, Igor I. Titov, Nikolay A. Kolchanov