Dieter Beule

17 papers Journal 14Unranked 3
YearRankTypeTitle / Venue / Authors
2024 J jnl
Identifying cancer cells from calling single-nucleotide variants in scRNA-seq data.
Bioinform.
Valérie Marot-Lassauzaie, Sergi Beneyto-Calabuig, Benedikt Obermayer, Lars Velten, Dieter Beule, Laleh Haghverdi
2022 J jnl
ClearCNV: CNV calling from NGS panel data in the presence of ambiguity and noise.
Bioinform.
Vinzenz May, Leonard Koch, Björn Fischer-Zirnsak, Denise Horn, Petra Gehle, Uwe Kornak, Dieter Beule, Manuel Holtgrewe
2021 J jnl
Neuroblastoma signalling models unveil combination therapies targeting feedback-mediated resistance.
PLoS Comput. Biol.
Mathurin Dorel, Bertram Klinger, Tommaso Mari, Joern Toedling, Eric Blanc, Clemens Messerschmidt, Michal Nadler-Holly, Matthias Ziehm, Anja Sieber, Falk Hertwig, Dieter Beule, Angelika Eggert, Johannes H. Schulte, Matthias Selbach, Nils Blüthgen
2020 J jnl
DigestiFlow: from BCL to FASTQ with ease.
Bioinform.
Manuel Holtgrewe, Clemens Messerschmidt, Mikko Nieminen, Dieter Beule
2020 J jnl
Portability of Scientific Workflows in NGS Data Analysis: A Case Study.
CoRR
Christopher Schiefer, Marc Bux, Jörgen Brandt, Clemens Messerschmidt, Knut Reinert, Dieter Beule, Ulf Leser
2020 J jnl
SODAR Core: a Django-based framework for scientific data management and analysis web apps.
J. Open Source Softw.
Mikko Nieminen, Oliver Stolpe, Franziska Schumann, Manuel Holtgrewe, Dieter Beule
2020 J jnl
VarFish: comprehensive DNA variant analysis for diagnostics and research.
Nucleic Acids Res.
Manuel Holtgrewe, Oliver Stolpe, Mikko Nieminen, Stefan Mundlos, Alexej Knaus, Uwe Kornak, Dominik Seelow, Lara Segebrecht, Malte Spielmann, Björn Fischer-Zirnsak, Felix Boschann, Ute Scholl, Nadja Ehmke, Dieter Beule
2019 J jnl
AltamISA: a Python API for ISA-Tab files.
J. Open Source Softw.
Mathias Kuhring, Mikko Nieminen, Jennifer Kirwan, Dieter Beule, Manuel Holtgrewe
2019 J jnl
SigsPack, a package for cancer mutational signatures.
BMC Bioinform.
Franziska Schumann, Eric Blanc, Clemens Messerschmidt, Thomas Blankenstein, Antonia Busse, Dieter Beule
2017 J jnl
HLA-MA: simple yet powerful matching of samples using HLA typing results.
Bioinform.
Clemens Messerschmidt, Manuel Holtgrewe, Dieter Beule
2016 J jnl
VCFPy: a Python 3 library with good support for both reading and writing VCF.
J. Open Source Softw.
Manuel Holtgrewe, Dieter Beule
2011 J jnl
Biomarker Discovery and Redundancy Reduction towards Classification using a Multi-factorial MALDI-TOF MS T2DM Mouse Model Dataset.
BMC Bioinform.
Chris Bauer, Frank Kleinjung, Celia J. Smith, Mark W. Towers, Ali Tiss, Alexandra Chadt, Tanja Dreja, Dieter Beule, Hadi Al-Hasani, Knut Reinert, Johannes Schuchhardt, Rainer Cramer
2001 J jnl
Combining frequency and positional information to predict transcription factor binding sites.
Bioinform.
Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel
2000 — conf
Finding Transcription Factor Binding Sites in Coregulated Genes by Exhaustive Sequence Search.
German Conference on Bioinformatics
Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel
2000 — conf
Reliability of Microarray Data and Clustering.
German Conference on Bioinformatics
Dieter Beule, Johannes Schuchhardt, Arif Malik, Holger Eickhoff, Hans Lehrach, Hanspeter Herzel
1999 — conf
Mutual Information Analysis of Surrogate Gene Expression Data.
German Conference on Bioinformatics
Dirk Holste, Dieter Beule, Wolfram Liebermeister, Johannes Schuchhardt, Hanspeter Herzel
1998 J jnl
Evolutionary search for low autocorrelated binary sequences.
IEEE Trans. Evol. Comput.
Burkhard Militzer, Michele Zamparelli, Dieter Beule