Diego Díaz-Domínguez

24 papers B 5C 5Journal 13Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
Adaptive encodings for small and fast compressed suffix arrays.
CoRR
Diego Díaz-Domínguez, Veli Mäkinen
2025 — conf
Algorithms for Computing Very Large BWTs: a Short Survey.
The Expanding World of Compressed Data
Diego Díaz-Domínguez, Lavinia Egidi, Veronica Guerrini, Felipe A. Louza, Giovanna Rosone
2025 B conf
Efficient Terabyte-Scale Text Compression via Stable Local Consistency and Parallel Grammar Processing.
SEA
Diego Díaz-Domínguez
2025 C conf
Prefix-Free Parsing for Merging Big BWTs.
SPIRE
Diego Díaz-Domínguez, Travis Gagie, Veronica Guerrini, Ben Langmead, Zsuzsanna Lipták, Giovanni Manzini, Francesco Masillo, Vikram Shivakumar
2025 J jnl
Prefix-free parsing for merging big BWTs.
CoRR
Diego Díaz-Domínguez, Travis Gagie, Veronica Guerrini, Ben Langmead, Zsuzsanna Lipták, Giovanni Manzini, Francesco Masillo, Vikram Shivakumar
2024 J jnl
Efficient terabyte-scale text compression via stable local consistency and parallel grammar processing.
CoRR
Diego Díaz-Domínguez
2024 J jnl
Space-efficient computation of k-mer dictionaries for large values of k.
Algorithms Mol. Biol.
Diego Díaz-Domínguez, Miika Leinonen, Leena Salmela
2023 C conf
Computing All-vs-All MEMs in Grammar-Compressed Text.
SPIRE
Diego Díaz-Domínguez, Leena Salmela
2023 J jnl
Computing all-vs-all MEMs in grammar-compressed text.
CoRR
Diego Díaz-Domínguez, Leena Salmela
2023 J jnl
Efficient construction of the BWT for repetitive text using string compression.
Inf. Comput.
Diego Díaz-Domínguez, Gonzalo Navarro
2023 B conf
Simple Runs-Bounded FM-Index Designs Are Fast.
SEA
Diego Díaz-Domínguez, Saska Dönges, Simon J. Puglisi, Leena Salmela
2022 C conf
Computing All-vs-All MEMs in Run-Length-Encoded Collections of HiFi Reads.
SPIRE
Diego Díaz-Domínguez, Simon J. Puglisi, Leena Salmela
2022 J jnl
Computing all-vs-all MEMs in run-length encoded collections of HiFi reads.
CoRR
Diego Díaz-Domínguez, Simon J. Puglisi, Leena Salmela
2022 B conf
Efficient Construction of the BWT for Repetitive Text Using String Compression.
CPM
Diego Díaz-Domínguez, Gonzalo Navarro
2022 J jnl
Efficient Construction of the BWT for Repetitive Text Using String Compression.
CoRR
Diego Díaz-Domínguez, Gonzalo Navarro
2021 B conf
A grammar compressor for collections of reads with applications to the construction of the BWT.
DCC
Diego Díaz-Domínguez, Gonzalo Navarro
2021 C conf
An LMS-Based Grammar Self-index with Local Consistency Properties.
SPIRE
Diego Díaz-Domínguez, Gonzalo Navarro, Alejandro Pacheco
2021 J jnl
Efficient construction of the extended BWT from grammar-compressed DNA sequencing reads.
CoRR
Diego Díaz-Domínguez, Gonzalo Navarro
2020 J jnl
A grammar compressor for collections of reads with applications to the construction of the BWT.
CoRR
Diego Díaz-Domínguez, Gonzalo Navarro
2019 J jnl
An Index for Sequencing Reads Based on The Colored de Bruijn Graph.
CoRR
Diego Díaz-Domínguez
2019 C conf
An Index for Sequencing Reads Based on the Colored de Bruijn Graph.
SPIRE
Diego Díaz-Domínguez
2019 B conf
Simulating the DNA Overlap Graph in Succinct Space.
CPM
Diego Díaz-Domínguez, Travis Gagie, Gonzalo Navarro
2019 J jnl
Simulating the DNA String Graph in Succinct Space.
CoRR
Diego Díaz-Domínguez, Travis Gagie, Gonzalo Navarro
2018 J jnl
Assembling Omnitigs using Hidden-Order de Bruijn Graphs.
CoRR
Diego Díaz-Domínguez, Djamal Belazzougui, Travis Gagie, Veli Mäkinen, Gonzalo Navarro, Simon J. Puglisi