Diego C. B. Mariano

19 papers C 1Journal 9Unranked 8
YearRankTypeTitle / Venue / Authors
2025 J jnl
COCαDA - a fast and scalable algorithm for interatomic contact detection in proteins using Cα distance matrices.
Frontiers Bioinform.
Rafael P. Lemos, Diego C. B. Mariano, Sabrina de Azevedo Silveira, Raquel Cardoso de Melo Minardi
2024 — conf
A strategy for refining the calculation of contacts in protein-RNA complexes.
BSB
Luana Luiza Bastos, Rafael P. Lemos, Diego C. B. Mariano, Raquel Cardoso de Melo Minardi
2024 — conf
COCαDA - Large-Scale Protein Interatomic Contact Cutoff Optimization by Cα Distance Matrices.
BSB
Rafael P. Lemos, Diego C. B. Mariano, Sabrina de Azevedo Silveira, Raquel Cardoso de Melo Minardi
2024 — conf
Predicting Mutation-Driven Changes in the SARS-CoV-2 Spike Protein Using Structural Signatures and Neural Networks.
BSB
Eduardo U. M. Moreira, Leandro Morais, Sheila Cruz Araujo, Rafael P. Lemos, Ana Luísa A. Bastos, Alessandra Lima da Silva, Diego C. B. Mariano, Raquel Cardoso de Melo Minardi
2024 — conf
Teaching bioinformatics programming in high school: a case report.
BSB
Helena Lott Costa, Giovana C. F. Maia, Lucas G. S. Chaves, Diego C. B. Mariano, Raquel Cardoso de Melo Minardi
2024 — conf
Using graph-based structural signatures and machine learning algorithms for molecular docking assessment of histone deacetylases and small ligands.
BSB
Alessandra Gomes Cioletti, Rafael P. Lemos, Lucas Moraes dos Santos, Diego C. B. Mariano, Raquel Cardoso de Melo Minardi
2024 C conf
ViPeC: Vision transformer-based approach for Peptide-protein interface Classification.
CIBCB
Lucas Moraes dos Santos, Diego C. B. Mariano, Raquel Cardoso de Melo Minardi
2023 J jnl
Editorial: Bioinformatics in the age of data science: algorithms, methods, and tools applied from Omics to structural data.
Frontiers Bioinform.
Diego C. B. Mariano, Néli José da Fonseca Jr., Lucianna Helene Santos, Raquel Cardoso de Melo Minardi
2023 — conf
Peptide-Protein Interface Classification Using Convolutional Neural Networks.
BSB
Lucas Moraes dos Santos, Diego C. B. Mariano, Luana Luiza Bastos, Alessandra Gomes Cioletti, Raquel Cardoso de Melo Minardi
2023 J jnl
Propedia v2.3: A novel representation approach for the peptide-protein interaction database using graph-based structural signatures.
Frontiers Bioinform.
Pedro Martins, Diego C. B. Mariano, Frederico Chaves Carvalho, Luana Luiza Bastos, Lucas Moraes, Vivian Morais Paixão, Raquel Cardoso de Melo Minardi
2023 — conf
Using Natural Language Processing for Context Identification in COVID-19 Literature.
BSB
Frederico Chaves Carvalho, Diego C. B. Mariano, Marcos Bomfim, Giovana Fiorini, Luana L. Bastos, Ana Paula de Abreu, Vivian Paixão, Lucas Moraes dos Santos, Juliana Silva, Angie Puelles, Alessandra Lima da Silva, Raquel Cardoso de Melo Minardi
2021 J jnl
From In-Person to the Online World: Insights Into Organizing Events in Bioinformatics.
Frontiers Bioinform.
Alessandra Lima da Silva, Ana Paula de Abreu, Diego C. B. Mariano, Felipe Caixeta, Fenícia Brito Santos, Fernanda Stussi D. Lage, Gabriel Quintanilha-Peixoto, Heron O. Hilário, Joicymara S. Xavier, Lucio R. Queiroz, Nayara Evelin de Toledo, Raphael Tavares, Rodrigo Bentes Kato, Roselane Gonçalves dos Santos, Stellamaris Soares, Wanessa M. Goes, Wylerson Guimarães Nogueira, Thiago M. Batista, José Miguel Ortega, Vasco Ariston Azevedo De Carvalho, Glória Regina Franco, Raquel Cardoso de Melo Minardi, Aristóteles Góes-Neto
2021 J jnl
Propedia: a database for protein-peptide identification based on a hybrid clustering algorithm.
BMC Bioinform.
Pedro M. Martins, Lucianna Helene Santos, Diego C. B. Mariano, Felippe C. Queiroz, Luana L. Bastos, Isabela de Souza Gomes, Pedro H. C. Fischer, Rafael E. O. Rocha, Sabrina de Azevedo Silveira, Leonardo H. F. de Lima, Mariana T. Q. de Magalhães, Maria G. A. Oliveira, Raquel Cardoso de Melo Minardi
2021 J jnl
VTR: A Web Tool for Identifying Analogous Contacts on Protein Structures and Their Complexes.
Frontiers Bioinform.
Vitor Pimentel, Diego C. B. Mariano, Letícia Xavier Silva Cantão, Luana Luiza Bastos, Pedro H. C. Fischer, Leonardo Henrique Franca de Lima, Alexandre Victor Fassio, Raquel Cardoso de Melo Minardi
2020 — conf
A Brief History of Bioinformatics Told by Data Visualization.
BSB
Diego C. B. Mariano, Mívian M. Ferreira, Bruno Luan de Sousa, Lucianna Helene Santos, Raquel Cardoso de Melo Minardi
2020 J jnl
Proteus: An algorithm for proposing stabilizing mutation pairs based on interactions observed in known protein 3D structures.
BMC Bioinform.
José Renato M. S. Barroso, Diego C. B. Mariano, Sandro R. Dias, Rafael E. O. Rocha, Lucianna Helene Santos, Ronaldo Alves Pinto Nagem, Raquel Cardoso de Melo Minardi
2019 J jnl
Proteingo: Motivation, user experience, and learning of molecular interactions in biological complexes.
Entertain. Comput.
Marcos Felipe Martins Silva, Pedro M. Martins, Diego C. B. Mariano, Lucianna Helene Santos, Isabela Pastorini, Naiara Pantuza, Cristiane Neri Nobre, Raquel Cardoso de Melo Minardi
2019 — —
Uso de assinaturas estruturais para proposta de mutações em enzimas β-glicosidase usadas na produção de biocombustíveis
Diego C. B. Mariano
2016 J jnl
SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology.
BMC Bioinform.
Diego C. B. Mariano, Felipe L. Pereira, Edgar L. Aguiar, Letícia de Castro Oliveira, Leandro Benevides, Luis Guimarães, Edson Luiz Folador, Thiago J. Sousa, Preetam Ghosh, Debmalya Barh, Henrique C. P. Figueiredo, Artur Silva, Rommel Ramos, Vasco Ariston de Carvalho Azevedo