Devin C. Koestler

15 papers Misc 1Journal 14
YearRankTypeTitle / Venue / Authors
2026 J jnl
A stochastic approach to k-nearest neighbors search using a fixed radius method.
Comput. Stat.
Brahian Cano Urrego, Alexander Alsup, Jeffrey A. Thompson, Devin C. Koestler
2025 J jnl
micRoclean: an R package for decontaminating low-biomass 16S-rRNA microbiome data.
Frontiers Bioinform.
Rachel Griffard-Smith, Emily Schueddig, Diane E. Mahoney, Prabhakar Chalise, Devin C. Koestler, Dong Pei
2023 J jnl
Simulating time-to-event data under the Cox proportional hazards model: assessing the performance of the non-parametric Flexible Hazards Method.
Frontiers Appl. Math. Stat.
Jennifer L. Delzeit, Devin C. Koestler
2023 J jnl
optima: an open-source R package for the Tapestri platform for integrative single cell multiomics data analysis.
Bioinform.
Dong Pei, Rachel Griffard, Nanda Kumar Yellapu, Emily Nissen, Devin C. Koestler
2022 J jnl
A Novel Framework for the Identification of Reference DNA Methylation Libraries for Reference-Based Deconvolution of Cellular Mixtures.
Frontiers Bioinform.
Shelby Bell-Glenn, Jeffrey A. Thompson, Lucas A. Salas, Devin C. Koestler
2022 J jnl
Assessing equivalent and inverse change in genes between diverse experiments.
Frontiers Bioinform.
Lisa Neums, Devin C. Koestler, Qing Xia, Jinxiang Hu, Shachi Patel, Shelby Bell-Glenn, Dong Pei, Bo Zhang, Samuel Boyd, Prabhakar Chalise, Jeffrey A. Thompson
2022 J jnl
Letter to the Editor: on the stability and internal consistency of component-wise sparse mixture regression-based clustering.
Briefings Bioinform.
Bo Zhang, Jianghua He, Jinxiang Hu, Devin C. Koestler, Prabhakar Chalise
2020 Misc conf
Improving Survival Prediction Using a Novel Feature Selection and Feature Reduction FrameworkBased on the Integration of Clinical and Molecular Data.
PSB
Lisa Neums, Richard Meier, Devin C. Koestler, Jeffrey A. Thompson
2019 J jnl
pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS).
BMC Bioinform.
Stefan Graw, Rosalyn Henn, Jeffrey A. Thompson, Devin C. Koestler
2018 J jnl
Relevant Word Order Vectorization for Improved Natural Language Processing in Electronic Healthcare Records.
CoRR
Jeffrey A. Thompson, Jinxiang Hu, Dinesh Pal Mudaranthakam, David Streeter, Lisa Neums, Michele Park, Devin C. Koestler, Byron Gajewski, Matthew S. Mayo
2018 J jnl
Subject level clustering using a negative binomial model for small transcriptomic studies.
BMC Bioinform.
Qian Li, Janelle R. Noel-MacDonnell, Devin C. Koestler, Ellen L. Goode, Brooke L. Fridley
2016 J jnl
An ensemble-based Cox proportional hazards regression framework for predicting survival in metastatic castration-resistant prostate cancer (mCRPC) patients.
F1000Research
Richard Meier, Stefan Graw, Joseph Usset, Rama Raghavan, Junqiang Dai, Prabhakar Chalise, Shellie Ellis, Brooke L. Fridley, Devin C. Koestler
2016 J jnl
Improving cell mixture deconvolution by identifying optimal DNA methylation libraries (IDOL).
BMC Bioinform.
Devin C. Koestler, Meaghan J. Jones, Joseph Usset, Brock C. Christensen, Rondi A. Butler, Michael S. Kobor, John K. Wiencke, Karl T. Kelsey
2012 J jnl
DNA methylation arrays as surrogate measures of cell mixture distribution.
BMC Bioinform.
Eugene Andres Houseman, William P. Accomando, Devin C. Koestler, Brock C. Christensen, Carmen J. Marsit, Heather H. Nelson, John K. Wiencke, Karl T. Kelsey
2010 J jnl
Semi-supervised recursively partitioned mixture models for identifying cancer subtypes.
Bioinform.
Devin C. Koestler, Carmen J. Marsit, Brock C. Christensen, Margaret R. Karagas, Raphael Bueno, David J. Sugarbaker, Karl T. Kelsey, Eugene Andres Houseman