David Sankoff - RankMe

168 papers A 2B 25C 9Misc 7Journal 80Unranked 43

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	Ancestral Pangenomes and Their Phylogenetic Reconstruction. RECOMB-CG Xintong Zhou, David Sankoff
2025	C	`conf`	Identifying Breakpoint Median Genomes: A Branching Algorithm Approach. WABI Poly H. da Silva, Arash Jamshidpey, David Sankoff
2025	—	`conf`	Residual Immunity and Seasonality of an Epidemic. RECOMB-CG Siyu Chen, David Sankoff
2024	—	`conf`	Sampling Gene Adjacencies and Geodesic Points of Random Genomes. RECOMB-CG Poly H. da Silva, Arash Jamshidpey, David Sankoff
2023	J	`jnl`	Capacity, Collision Avoidance and Shopping Rate under a Social Distancing Regime. CoRR Haitian Zhong, David Sankoff
2023	J	`jnl`	Capacity, Collision Avoidance and Shopping Rate under a Social Distancing Regime. Entropy Haitian Zhong, David Sankoff
2023	J	`jnl`	Escape from Parsimony of a Double-Cut-and-Join Genome Evolution Process. J. Comput. Biol. Mona Meghdari Miardan, Arash Jamshidpey, David Sankoff
2023	—	`conf`	Gene Order Phylogeny via Ancestral Genome Reconstruction Under Dollo. RECOMB-CG Qiaoji Xu, David Sankoff
2022	—	`conf`	Syntenic Dimensions of Genomic Evolution. RECOMB-CG Zhe Yu, David Sankoff
2021	J	`jnl`	Ancestral Flowering Plant Chromosomes and Gene Orders Based on Generalized Adjacencies and Chromosomal Gene Co-Occurrences. J. Comput. Biol. Qiaoji Xu, Lingling Jin, Yue Zhang, Xiaomeng Zhang, Chunfang Zheng, James H. Leebens-Mack, David Sankoff
2021	J	`jnl`	Branching Out to Speciation in a Model of Fractionation: The Malvaceae. IEEE ACM Trans. Comput. Biol. Bioinform. Yue Zhang, Chunfang Zheng, Sindeed Islam, Yong-Min Kim, David Sankoff
2021	J	`jnl`	Guest Editorial for the 17th Asia Pacific Bioinformatics Conference. IEEE ACM Trans. Comput. Biol. Bioinform. Louxin Zhang, Shaoliang Peng, Yi-Ping Phoebe Chen, David Sankoff, Guoliang Li, Hong-Yu Zhang
2021	J	`jnl`	The monoploid chromosome complement of reconstructed ancestral genomes in a phylogeny. J. Bioinform. Comput. Biol. Qiaoji Xu, Xiaomeng Zhang, Yue Zhang, Chunfang Zheng, James H. Leebens-Mack, Lingling Jin, David Sankoff
2021	J	`jnl`	Validation of Automated Chromosome Recovery in the Reconstruction of Ancestral Gene Order. Algorithms Qiaoji Xu, Lingling Jin, James H. Leebens-Mack, David Sankoff
2020	—	`conf`	Gaps and Runs in Syntenic Alignments. AlCoB Zhe Yu, Chunfang Zheng, David Sankoff
2020	—	`conf`	RACCROCHE: Ancestral Flowering Plant Chromosomes and Gene Orders Based on Generalized Adjacencies and Chromosomal Gene Co-occurrences. ICCABS Qiaoji Xu, Lingling Jin, Chunfang Zheng, James H. Leebens-Mack, David Sankoff
2019	J	`jnl`	A branching process for homology distribution-based inference of polyploidy, speciation and loss. Algorithms Mol. Biol. Yue Zhang, Chunfang Zheng, David Sankoff
2019	J	`jnl`	Distinguishing successive ancient polyploidy levels based on genome-internal syntenic alignment. BMC Bioinform. Yue Zhang, Chunfang Zheng, David Sankoff
2019	J	`jnl`	Models for Similarity Distributions of Syntenic Homologs and Applications to Phylogenomics. IEEE ACM Trans. Comput. Biol. Bioinform. David Sankoff, Chunfang Zheng, Yue Zhang, Joao Meidanis, Eric Lyons, Haibao Tang
2018	Misc	`conf`	A Randomized FPT Approximation Algorithm for Maximum Alternating-Cycle Decomposition with Applications. COCOON Haitao Jiang, Lianrong Pu, Letu Qingge, David Sankoff, Binhai Zhu
2018	J	`jnl`	Accurate prediction of orthologs in the presence of divergence after duplication. Bioinform. Manuel Lafond, Mona Meghdari Miardan, David Sankoff
2018	B	`ed.`	Annual Symposium on Combinatorial Pattern Matching, CPM 2018, Qingdao, China, July 2-4, 2018 CPM Gonzalo Navarro, David Sankoff, Binhai Zhu
2018	J	`jnl`	Evolutionary Model for the Statistical Divergence of Paralogous and Orthologous Gene Pairs Generated by Whole Genome Duplication and Speciation. IEEE ACM Trans. Comput. Biol. Bioinform. Yue Zhang, Chunfang Zheng, David Sankoff
2018	J	`jnl`	Resolution effects in reconstructing ancestral genomes. BMC Genom. Chunfang Zheng, Yuji Jeong, Madisyn Gabrielle Turcotte, David Sankoff
2018	—	`conf`	Speciation and Rate Variation in a Birth-and-Death Account of WGD and Fractionation; the Case of Solanaceae. RECOMB-CG Yue Zhang, Chunfang Zheng, David Sankoff
2017	J	`jnl`	Asymptotic medians of random permutations sampled from reversal random walks. Theor. Comput. Sci. Arash Jamshidpey, David Sankoff
2017	—	`conf`	The Similarity Distribution of Paralogous Gene Pairs Created by Recurrent Alternation of Polyploidization and Fractionation. RECOMB-CG Yue Zhang, David Sankoff
2016	J	`jnl`	A continuous analog of run length distributions reflecting accumulated fractionation events. BMC Bioinform. Zhe Yu, David Sankoff
2016	J	`jnl`	Compromise or optimize? The breakpoint anti-median. BMC Bioinform. Caroline Anne Larlee, Alex Brandts, David Sankoff
2016	J	`jnl`	Locating rearrangement events in a phylogeny based on highly fragmented assemblies. BMC Genom. Chunfang Zheng, David Sankoff
2016	—	`conf`	The Trees in the Peaks. AlCoB David Sankoff, Chunfang Zheng, Eric Lyons, Haibao Tang
2015	C	`conf`	Graph-Theoretic Modelling of the Domain Chaining Problem. WABI Poly H. da Silva, Simone Dantas, Chunfang Zheng, David Sankoff
2015	C	`conf`	Literature Visualization and Similarity Measurement Based on Citation Relations. IV Hanadi Alfraidi, Won-Sook Lee, David Sankoff
2015	—	`conf`	Statistical analysis of fractionation resistance by functional category and expression level. ICCABS Eric C. H. Chen, Annie Morin, Jean-Hugues Chauchat, David Sankoff
2015	J	`jnl`	Structural vs. functional mechanisms of duplicate gene loss following whole genome doubling. BMC Bioinform. David Sankoff, Chunfang Zheng, Baoyong Wang, Carlos Fernando Buen Abad Najar
2014	J	`jnl`	Practical halving; the Nelumbo nucifera evidence on early eudicot evolution. Comput. Biol. Chem. Chunfang Zheng, David Sankoff
2014	—	`conf`	Structural vs. functional mechanisms of duplicate gene loss following whole genome doubling. ICCABS David Sankoff, Baoyong Wang, Chunfang Zheng, Carlos Fernando Buen Abad Najar
2013	—	`ch.`	Fractionation, Rearrangement, Consolidation, Reconstruction. Models and Algorithms for Genome Evolution David Sankoff, Chunfang Zheng
2013	J	`jnl`	Phase change for the accuracy of the median value in estimating divergence time. BMC Bioinform. Arash Jamshidpey, David Sankoff
2013	J	`jnl`	Practical aliquoting of flowering plant genomes. BMC Bioinform. Chunfang Zheng, David Sankoff
2013	J	`jnl`	The dynamics of functional classes of plant genes in rediploidized ancient polyploids. BMC Bioinform. Eric C. H. Chen, Carlos Fernando Buen Abad Najar, Chunfang Zheng, Alex Brandts, Eric Lyons, Haibao Tang, Lorenzo Carretero-Paulet, Victor A. Albert, David Sankoff
2012	B	`conf`	A Model for Biased Fractionation after Whole Genome Duplication. RECOMB David Sankoff, Chunfang Zheng, Baoyong Wang
2012	J	`jnl`	A consolidation algorithm for genomes fractionated after higher order polyploidization. BMC Bioinform. Katharina Jahn, Chunfang Zheng, Jakub Kovác, David Sankoff
2012	J	`jnl`	A model for biased fractionation after whole genome duplication. BMC Genom. David Sankoff, Chunfang Zheng, Baoyong Wang
2012	—	`conf`	Ancient angiosperm hexaploidy meets ancestral eudicot gene order. ICCABS Chunfang Zheng, Victor A. Albert, Eric Lyons, David Sankoff
2012	J	`jnl`	Detection of gene expression changes at chromosomal rearrangement breakpoints in evolution. BMC Bioinform. Adriana Muñoz, David Sankoff
2012	J	`jnl`	Fractionation, rearrangement and subgenome dominance. Bioinform. David Sankoff, Chunfang Zheng
2012	J	`jnl`	Gene clusters as intersections of powers of paths. J. Braz. Comput. Soc. Vítor Costa, Simone Dantas, David Sankoff, Ximing Xu
2012	J	`jnl`	Gene order in rosid phylogeny, inferred from pairwise syntenies among extant genomes. BMC Bioinform. Chunfang Zheng, David Sankoff
2012	J	`jnl`	Generalized adjacency and the conservation of gene clusters in genetic networks defined by synthetic lethals. BMC Bioinform. Zhenyu Yang, David Sankoff
2012	—	`conf`	Keynote: Aspects of fractionation. ICCABS David Sankoff
2012	J	`jnl`	Medians seek the corners, and other conjectures. BMC Bioinform. Maryam Haghighi, David Sankoff
2012	J	`jnl`	Scaffold Filling under the Breakpoint and Related Distances. IEEE ACM Trans. Comput. Biol. Bioinform. Haitao Jiang, Chunfang Zheng, David Sankoff, Binhai Zhu
2012	J	`jnl`	The Kernel of Maximum Agreement Subtrees. IEEE ACM Trans. Comput. Biol. Bioinform. Krister M. Swenson, Eric C. H. Chen, Nicholas D. Pattengale, David Sankoff
2011	—	`conf`	Changes in gene expression near evolutionary breakpoints. BCB Adriana Muñoz, David Sankoff
2011	J	`jnl`	Fractionation statistics. BMC Bioinform. Baoyong Wang, Chunfang Zheng, David Sankoff
2011	—	`conf`	Gene Order in Rosid Phylogeny, Inferred from Pairwise Syntenies among Extant Genomes. ISBRA Chunfang Zheng, David Sankoff
2011	—	`conf`	Generalized Adjacency in Genetic Networks and the Conservation of Functional Gene Clusters. BIBM Zhenyu Yang, David Sankoff
2011	J	`jnl`	Genome Aliquoting Revisited. J. Comput. Biol. Robert Warren, David Sankoff
2011	J	`jnl`	Listing All Parsimonious Reversal Sequences: New Algorithms and Perspectives. J. Comput. Biol. Ghada Badr, Krister M. Swenson, David Sankoff
2011	J	`jnl`	Listing all sorting reversals in quadratic time. Algorithms Mol. Biol. Krister M. Swenson, Ghada Badr, David Sankoff
2011	—	`conf`	OMG! Orthologs for Multiple Genomes - Competing Formulations - (Keynote Talk). ISBRA David Sankoff
2011	C	`conf`	OMG! Orthologs in Multiple Genomes - Competing Graph-Theoretical Formulations. WABI Chunfang Zheng, Krister M. Swenson, Eric Lyons, David Sankoff
2011	J	`jnl`	On the PATHGROUPS approach to rapid small phylogeny. BMC Bioinform. Chunfang Zheng, David Sankoff
2011	—	`conf`	The Kernel of Maximum Agreement Subtrees. ISBRA Krister M. Swenson, Eric C. H. Chen, Nicholas D. Pattengale, David Sankoff
2010	J	`jnl`	A Statistically Fair Comparison of Ancestral Genome Reconstructions, Based on Breakpoint and Rearrangement Distances. J. Comput. Biol. Zaky Adam, David Sankoff
2010	—	`conf`	Genome Aliquoting Revisited. RECOMB-CG Robert Warren, David Sankoff
2010	—	`conf`	Listing All Parsimonious Reversal Sequences: New Algorithms and Perspectives. RECOMB-CG Ghada Badr, Krister M. Swenson, David Sankoff
2010	C	`conf`	Listing All Sorting Reversals in Quadratic Time. WABI Krister M. Swenson, Ghada Badr, David Sankoff
2010	J	`jnl`	Natural Parameter Values for Generalized Gene Adjacency. J. Comput. Biol. Zhenyu Yang, David Sankoff
2010	J	`jnl`	Rearrangement Phylogeny of Genomes in Contig Form. IEEE ACM Trans. Comput. Biol. Bioinform. Adriana Muñoz, David Sankoff
2010	—	`conf`	Scaffold Filling under the Breakpoint Distance. RECOMB-CG Haitao Jiang, Chunfang Zheng, David Sankoff, Binhai Zhu
2010	J	`jnl`	Scaffold filling, contig fusion and comparative gene order inference. BMC Bioinform. Adriana Muñoz, Chunfang Zheng, Qian Zhu, Victor A. Albert, Steve Rounsley, David Sankoff
2010	Misc	`conf`	Session Introduction. Pacific Symposium on Biocomputing Bernard M. E. Moret, Webb Miller, Pavel A. Pevzner, David Sankoff
2009	—	`conf`	A Statistically Fair Comparison of Ancestral Genome Reconstructions, Based on Breakpoint and Rearrangement Distances. RECOMB-CG Zaky Adam, David Sankoff
2009	J	`jnl`	Gene Loss under Neighborhood Selection Following Whole genome Duplication and the Reconstruction of the Ancestral Populus genome. J. Bioinform. Comput. Biol. Chunfang Zheng, P. Kerr Wall, James H. Leebens-Mack, Claude de Pamphilis, Victor A. Albert, David Sankoff
2009	J	`jnl`	Generalized Gene Adjacencies, Graph Bandwidth, and Clusters in Yeast Evolution. IEEE ACM Trans. Comput. Biol. Bioinform. Qian Zhu, Zaky Adam, Vicky Choi, David Sankoff
2009	J	`jnl`	Genome Halving with Double Cut and Join. J. Bioinform. Comput. Biol. Robert Warren, David Sankoff
2009	J	`jnl`	Genome aliquoting with double cut and join. BMC Bioinform. Robert Warren, David Sankoff
2009	J	`jnl`	Issues in the Reconstruction of Gene Order Evolution. J. Comput. Sci. Technol. David Sankoff, Chunfang Zheng, Adriana Muñoz, Zhenyu Yang, Zaky Adam, Robert Warren, Vicky Choi, Qian Zhu
2009	J	`jnl`	Multichromosomal median and halving problems under different genomic distances. BMC Bioinform. Eric Tannier, Chunfang Zheng, David Sankoff
2009	—	`conf`	Natural Parameter Values for Generalized Gene Adjacency. RECOMB-CG Zhenyu Yang, David Sankoff
2009	—	`conf`	Rearrangement Phylogeny of Genomes in Contig Form. ISBRA Adriana Muñoz, David Sankoff
2009	Misc	`conf`	Session Introduction. Pacific Symposium on Biocomputing Bernard M. E. Moret, Webb Miller, Pavel A. Pevzner, David Sankoff
2009	J	`jnl`	Towards Improved Reconstruction of Ancestral Gene Order in Angiosperm Phylogeny. J. Comput. Biol. David Sankoff, Chunfang Zheng, P. Kerr Wall, Claude de Pamphilis, James H. Leebens-Mack, Victor A. Albert
2008	—	`conf`	A Customized Class of Functions for Modeling and Clustering Gene Expression Profiles in Embryonic Stem Cells. BSB Shenggang Li, Miguel A. Andrade-Navarro, David Sankoff
2008	C	`conf`	Decompositions of Multiple Breakpoint Graphs and Rapid Exact Solutions to the Median Problem. WABI Andrew Wei Xu, David Sankoff
2008	J	`jnl`	Descendants of Whole Genome Duplication within Gene Order Phylogeny. J. Comput. Biol. Chunfang Zheng, Qian Zhu, David Sankoff
2008	—	`conf`	Generalized Gene Adjacencies, Graph Bandwidth and Clusters in Yeast Evolution. ISBRA Qian Zhu, Zaky Adam, Vicky Choi, David Sankoff
2008	B	`conf`	Genome Halving with Double Cut and Join. APBC Robert Warren, David Sankoff
2008	A	`conf`	Guided genome halving: hardness, heuristics and the history of the Hemiascomycetes. ISMB Chunfang Zheng, Qian Zhu, Zaky Adam, David Sankoff
2008	—	`conf`	Hierarchical Clustering Using Constraints. ISBRA Mariana Kant, Maurice LeBon, David Sankoff
2008	—	`conf`	Internal Validation of Ancestral Gene Order Reconstruction in Angiosperm Phylogeny. RECOMB-CG David Sankoff, Chunfang Zheng, P. Kerr Wall, Claude W. dePamphilis, James H. Leebens-Mack, Victor A. Albert
2008	C	`conf`	Multichromosomal Genome Median and Halving Problems. WABI Eric Tannier, Chunfang Zheng, David Sankoff
2008	C	`conf`	Poisson adjacency distributions in genome comparison: multichromosomal, circular, signed and unsigned cases. ECCB Andrew Wei Xu, Benoît Alain, David Sankoff
2008	—	`conf`	Tests for Gene Clusters Satisfying the Generalized Adjacency Criterion. BSB Ximing Xu, David Sankoff
2007	C	`conf`	Algorithms for the Extraction of Synteny Blocks from Comparative Maps. WABI Vicky Choi, Chunfang Zheng, Qian Zhu, David Sankoff
2007	J	`jnl`	Common Intervals and Symmetric Difference in a Model-Free Phylogenomics, with an Application to Streptophyte Evolution. J. Comput. Biol. Zaky Adam, Monique Turmel, Claude Lemieux, David Sankoff
2007	—	`ch.`	Conserved segment statistics and rearrangement inferences in comparative genomics. Mathematics of Evolution and Phylogeny David Sankoff
2007	—	`conf`	Parts of the Problem of Polyploids in Rearrangement Phylogeny. RECOMB-CG Chunfang Zheng, Qian Zhu, David Sankoff
2007	J	`jnl`	Paths and Cycles in Breakpoint Graph of Random Multichromosomal Genomes. J. Comput. Biol. Wei Xu, Chunfang Zheng, David Sankoff
2007	—	`conf`	Polyploids, genome halving and phylogeny. ISMB/ECCB (Supplement of Bioinformatics) David Sankoff, Chunfang Zheng, Qian Zhu
2007	B	`conf`	Preface. APBC David Sankoff, Lusheng Wang, Francis Y. L. Chin
2007	B	`ed.`	Proceedings of 5th Asia-Pacific Bioinformatics Conference, APBC 2007, 15-17 January 2007, Hong Kong, China APBC David Sankoff, Lusheng Wang, Francis Y. L. Chin
2007	J	`jnl`	Removing Noise and Ambiguities from Comparative Maps in Rearrangement Analysis. IEEE ACM Trans. Comput. Biol. Bioinform. Chunfang Zheng, Qian Zhu, David Sankoff
2006	—	`conf`	Common Intervals and Symmetric Difference in a Model-Free Phylogenomics, with an Application to Streptophyte Evolution. Comparative Genomics Zaky Adam, Monique Turmel, Claude Lemieux, David Sankoff
2006	J	`jnl`	Genome rearrangements with partially ordered chromosomes. J. Comb. Optim. Chunfang Zheng, David Sankoff
2006	—	`conf`	Paths and Cycles in Breakpoint Graphs of Random Multichromosomal Genomes. Comparative Genomics Andrew Wei Xu, Chunfang Zheng, David Sankoff
2006	Misc	`conf`	Rearrangement of Noisy Genomes. International Conference on Computational Science (2) Chunfang Zheng, David Sankoff
2006	J	`jnl`	Stability of Rearrangement Measures in the Comparison of Genome Sequences. J. Comput. Biol. Matthew Mazowita, Lani Haque, David Sankoff
2006	B	`conf`	Statistical Evaluation of Genome Rearrangement. RECOMB David Sankoff
2006	J	`jnl`	The Distribution of Genomic Distance between Random Genomes. J. Comput. Biol. David Sankoff, Lani Haque
2006	J	`jnl`	The Signal in the Genomes. PLoS Comput. Biol. David Sankoff
2005	J	`jnl`	Chromosomal Breakpoint Reuse in Genome Sequence Rearrangement. J. Comput. Biol. David Sankoff, Phil Trinh
2005	Misc	`conf`	Genome Rearrangements with Partially Ordered Chromosomes. COCOON Chunfang Zheng, David Sankoff
2005	—	`conf`	Power Boosts for Cluster Tests. Comparative Genomics David Sankoff, Lani Haque
2005	—	`conf`	Reversal distance for partially ordered genomes. ISMB (Supplement of Bioinformatics) Chunfang Zheng, Aleksander Lenert, David Sankoff
2005	—	`conf`	Reversals of Fortune. Comparative Genomics David Sankoff, Chunfang Zheng, Aleksander Lenert
2005	B	`conf`	Stability of Rearrangement Measures in the Comparison of Genome Sequences. RECOMB David Sankoff, Matthew Mazowita
2005	J	`jnl`	The Statistical Analysis of Spatially Clustered Genes under the Maximum Gap Criterion. J. Comput. Biol. Rose Hoberman, David Sankoff, Dannie Durand
2004	B	`conf`	Chromosomal breakpoint re-use in the inference of genome sequence rearrangement. RECOMB David Sankoff, Phil Trinh
2004	J	`jnl`	Editorial: Combinatiorial Pattern Matching. J. Discrete Algorithms Raffaele Giancarlo, David Sankoff
2004	—	`conf`	Estimators of Translocations and Inversions in Comparative Maps. Comparative Genomics David Sankoff, Matthew Mazowita
2004	—	`conf`	Genomic features in the breakpoint regions between syntenic blocks. ISMB/ECCB (Supplement of Bioinformatics) Phil Trinh, Aoife McLysaght, David Sankoff
2004	J	`jnl`	Improving Gene Network Inference by Comparing Expression Time-series across Species, Developmental Stages or Tissues. J. Bioinform. Comput. Biol. Guillaume Bourque, David Sankoff
2004	—	`conf`	The Distribution of Inversion Lengths in Bacteria. Comparative Genomics David Sankoff, Jean-François Lefebvre, Elisabeth R. M. Tillier, Adrian Maler, Nadia El-Mabrouk
2004	—	`conf`	The Statistical Significance of Max-Gap Clusters. Comparative Genomics Rose Hoberman, David Sankoff, Dannie Durand
2003	—	`conf`	Detection and validation of single gene inversions. ISMB (Supplement of Bioinformatics) Jean-François Lefebvre, Nadia El-Mabrouk, Elisabeth R. M. Tillier, David Sankoff
2003	J	`jnl`	Tests for Gene Clustering. J. Comput. Biol. Dannie Durand, David Sankoff
2003	J	`jnl`	The Reconstruction of Doubled Genomes. SIAM J. Comput. Nadia El-Mabrouk, David Sankoff
2002	B	`ed.`	Proceedings of the Sixth Annual International Conference on Computational Biology, RECOMB 2002, Washington, DC, USA, April 18-21, 2002 RECOMB Gene Myers, Sridhar Hannenhalli, David Sankoff, Sorin Istrail, Pavel A. Pevzner, Michael S. Waterman
2002	J	`jnl`	Short inversions and conserved gene cluster. Bioinform. David Sankoff
2002	Misc	`conf`	Short inversions and conserved gene clusters. SAC David Sankoff
2002	B	`conf`	Tests for gene clustering. RECOMB Dannie Durand, David Sankoff
2000	B	`ed.`	Combinatorial Pattern Matching, 11th Annual Symposium, CPM 2000, Montreal, Canada, June 21-23, 2000, Proceedings CPM Raffaele Giancarlo, David Sankoff
2000	J	`jnl`	Early Eukaryote Evolution Based on Mitochondrial Gene Order Breakpoints. J. Comput. Biol. David Sankoff, David Bryant, Mélanie Deneault, B. Franz Lang, Gertraud Burger
2000	B	`conf`	Early eukaryote evolution based on mitochondrial gene order breakpoints. RECOMB David Sankoff, David Bryant, Mélanie Deneault, B. Franz Lang, Gertraud Burger
2000	J	`jnl`	The early introduction of dynamic programming into computational biology. Bioinform. David Sankoff
1999	B	`conf`	Generating 3D Virtual Populations from Pictures of a Few Individuals. WADS Won-Sook Lee, Pierre Beylot, David Sankoff, Nadia Magnenat-Thalmann
1999	J	`jnl`	Genome rearrangement with gene families. Bioinform. David Sankoff
1999	B	`conf`	Hybridization and Genome Rearrangement. CPM Nadia El-Mabrouk, David Sankoff
1999	J	`jnl`	Phylogenetic Invariants for Genome Rearrangements. J. Comput. Biol. David Sankoff, Mathieu Blanchette
1999	J	`jnl`	Phylogenetic Reconstruction from Genome Order Data. Electron. Notes Discret. Math. David Bryant, David Sankoff
1999	B	`conf`	Probability models for genome rearrangement and linear invariants for phylogenetic inference. RECOMB David Sankoff, Mathieu Blanchette
1999	B	`conf`	Reconstructing the pre-doubling genome. RECOMB Nadia El-Mabrouk, David Bryant, David Sankoff
1998	B	`conf`	Genome Halving. CPM Nadia El-Mabrouk, Joseph H. Nadeau, David Sankoff
1998	J	`jnl`	Multiple Genome Rearrangement and Breakpoint Phylogeny. J. Comput. Biol. David Sankoff, Mathieu Blanchette
1998	B	`conf`	Multiple genome rearrangements. RECOMB David Sankoff, Mathieu Blanchette
1998	A	`ed.`	Proceedings of the 6th International Conference on Intelligent Systems for Molecular Biology (ISMB-98), Montréal, Québec, Canada, June 28 - July 1, 1998 ISMB Janice I. Glasgow, Timothy G. Littlejohn, François Major, Richard H. Lathrop, David Sankoff, Christoph W. Sensen
1998	—	`conf`	The Production of Code-Mixed Discourse. COLING-ACL David Sankoff
1997	J	`jnl`	Conserved Segment Identification. J. Comput. Biol. David Sankoff, Vincent Ferretti, Joseph H. Nadeau
1997	B	`conf`	Conserved segment identification. RECOMB David Sankoff, Vincent Ferretti, Joseph H. Nadeau
1997	B	`conf`	On the Nadeau-Taylor Theory of Conserved Chromosome Segments. CPM David Sankoff, Marie-Noelle Parent, Isabelle Marchand, Vincent Ferretti
1997	Misc	`conf`	The Median Problem for Breakpoints in Comparative Genomics. COCOON David Sankoff, Mathieu Blanchette
1996	J	`jnl`	Conserved Synteny As a Measure of Genomic Distance. Discret. Appl. Math. David Sankoff, Joseph H. Nadeau
1996	B	`conf`	Original Synteny. CPM Vincent Ferretti, Joseph H. Nadeau, David Sankoff
1996	J	`jnl`	Steiner Points in the Space of Genome Rearrangements. Int. J. Found. Comput. Sci. David Sankoff, Gopal Sundaram, John D. Kececioglu
1995	J	`jnl`	Exact and Approximation Algorithms for Sorting by Reversals, with Application to Genome Rearrangement. Algorithmica John D. Kececioglu, David Sankoff
1994	B	`conf`	Efficient Bounds for Oriented Chromosome Inversion Distance. CPM John D. Kececioglu, David Sankoff
1994	J	`jnl`	Skewed Base Compositions, Asymmetric Transition Matrices, and Phylogenetic Invariants. J. Comput. Biol. Vincent Ferretti, B. Franz Lang, David Sankoff
1993	B	`conf`	Exact and Approximation Algorithms for the Inversion Distance Between Two Chromosomes. CPM John D. Kececioglu, David Sankoff
1992	B	`conf`	Edit Distances for Genome Comparisons Based on Non-Local Operations. CPM David Sankoff
1990	J	`jnl`	Comparison of musical sequences. Comput. Humanit. Marcel Mongeau, David Sankoff
1982	J	`jnl`	A strategy for sequence phylogeny research. Nucleic Acids Res. David Sankoff, R. J. Cedergren, W. McKay
1975	J	`jnl`	Locating the vertices of a steiner tree in an arbitrary metric space. Math. Program. David Sankoff, Pascale Rousseau
1973	J	`jnl`	Shortcuts, diversions, and maximal chainsin partially ordered sets. Discret. Math. David Sankoff, Peter H. Sellers
1971	J	`jnl`	Dictionary Structure and Probability Measures Inf. Control. David Sankoff
1969	B	`conf`	Simulation of Word-Meaning Stochastic Processes. COLING David Sankoff