David Kouril

18 papers Journal 16Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
Design Space and Declarative Grammar for 3D Genomic Data Visualization.
IEEE Trans. Vis. Comput. Graph.
David Kouril, Trevor Manz, Sehi L'Yi, Nils Gehlenborg
2026 J jnl
Uchimata: a toolkit for visualization of 3D genome structures on the web and in computational notebooks.
Bioinform.
David Kouril, Trevor Manz, Tereza Clarence, Nils Gehlenborg
2025 J jnl
GQVis: A Dataset of Genomics Data Questions and Visualizations for Generative AI.
CoRR
Skylar Sargent Walters, Arthea Valderrama, Thomas C. Smits, David Kouril, Huyen N. Nguyen, Sehi L'Yi, Devin Lange, Nils Gehlenborg
2025 J jnl
The challenge of chromatin model comparison and validation: A project from the first international 4D Nucleome Hackathon.
PLoS Comput. Biol.
Jedrzej Kubica, Sevastianos Korsak, Krzysztof H. Banecki, Dvir Schirman, Anurupa Devi Yadavalli, Ariana Brenner Clerkin, David Kouril, Michal Kadlof, Ben Busby, Dariusz Plewczynski
2024 J jnl
Virtual reality inspection of chromatin 3D and 2D data.
Comput. Graph.
Elena Molina, David Kouril, Tobias Isenberg, Barbora Kozlíková, Pere-Pau Vázquez
2023 J jnl
Molecumentary: Adaptable Narrated Documentaries Using Molecular Visualization.
IEEE Trans. Vis. Comput. Graph.
David Kouril, Ondrej Strnad, Peter Mindek, Sarkis Halladjian, Tobias Isenberg, M. Eduard Gröller, Ivan Viola
2023 J jnl
Nanotilus: Generator of Immersive Guided-Tours in Crowded 3D Environments.
IEEE Trans. Vis. Comput. Graph.
Ruwayda Alharbi, Ondrej Strnad, Laura Rosalia Luidolt, Manuela Waldner, David Kouril, Ciril Bohak, Tobias Klein, Eduard Gröller, Ivan Viola
2022 J jnl
ChromoSkein: Untangling Three-Dimensional Chromatin Fiber With a Web-Based Visualization Framework.
CoRR
Matús Talcík, Filip Opálený, Tereza Clarence, Katarína Furmanová, Jan Byska, Barbora Kozlíková, David Kouril
2022 J jnl
Multiscale Unfolding: Illustratively Visualizing the Whole Genome at a Glance.
IEEE Trans. Vis. Comput. Graph.
Sarkis Halladjian, David Kouril, Haichao Miao, M. Eduard Gröller, Ivan Viola, Tobias Isenberg
2021 J jnl
HyperLabels: Browsing of Dense and Hierarchical Molecular 3D Models.
IEEE Trans. Vis. Comput. Graph.
David Kouril, Tobias Isenberg, Barbora Kozlíková, Miriah Meyer, M. Eduard Gröller, Ivan Viola
2021 J jnl
Visualization Working Group at TU Wien:
Vis. Informatics
Hsiang-Yun Wu, Aleksandr Amirkhanov, Nicolas Grossmann, Tobias Klein, David Kouril, Haichao Miao, Laura Rosalia Luidolt, Peter Mindek, Renata G. Raidou, Ivan Viola, Manuela Waldner, M. Eduard Gröller
2020 J jnl
Molecumentary: Scalable Narrated Documentaries Using Molecular Visualization.
CoRR
David Kouril, Ondrej Strnad, Peter Mindek, Sarkis Halladjian, Tobias Isenberg, M. Eduard Gröller, Ivan Viola
2020 J jnl
Scale Trotter: Illustrative Visual Travels Across Negative Scales.
IEEE Trans. Vis. Comput. Graph.
Sarkis Halladjian, Haichao Miao, David Kouril, M. Eduard Gröller, Ivan Viola, Tobias Isenberg
2019 J jnl
Labels on Levels: Labeling of Multi-Scale Multi-Instance and Crowded 3D Biological Environments.
IEEE Trans. Vis. Comput. Graph.
David Kouril, Ladislav Cmolík, Barbora Kozlíková, Hsiang-Yun Wu, Graham Johnson, David S. Goodsell, Arthur J. Olson, M. Eduard Gröller, Ivan Viola
2019 J jnl
ScaleTrotter: Illustrative Visual Travels Across Negative Scales.
CoRR
Sarkis Halladjian, Haichao Miao, David Kouril, M. Eduard Gröller, Ivan Viola, Tobias Isenberg
2018 — conf
Semantic Screen-Space Occlusion for Multiscale Molecular Visualization.
VCBM@MICCAI
Thomas Bernhard Koch, David Kouril, Tobias Klein, Peter Mindek, Ivan Viola
2018 J jnl
Visualization Multi-Pipeline for Communicating Biology.
IEEE Trans. Vis. Comput. Graph.
Peter Mindek, David Kouril, Johannes Sorger, Daniel Toloudis, Blair Lyons, Graham Johnson, M. Eduard Gröller, Ivan Viola
2013 — conf
GeneDBase - Genetic Database of Selected Species of Mammals in the Czech Republic.
ISESS
Ludek Skocovský, Tomás Sikula, Martin Ernst, David Kouril