David C. Samuels

22 papers C 1Misc 1Journal 17Unranked 3
YearRankTypeTitle / Venue / Authors
2021 J jnl
Two data-driven approaches to identifying the spectrum of problematic opioid use: A pilot study within a chronic pain cohort.
Int. J. Medical Informatics
Lori Schirle, Alvin D. Jeffery, Ali Yaqoob, Sandra Sanchez-Roige, David C. Samuels
2020 J jnl
Cancer-specific expression quantitative loci are affected by expression dysregulation.
Briefings Bioinform.
Quanhu Sheng, David C. Samuels, Hui Yu, Scott Ness, Ying-Yong Zhao, Yan Guo
2020 J jnl
MutEx: a multifaceted gateway for exploring integrative pan-cancer genomic data.
Briefings Bioinform.
Jie Ping, Olufunmilola Oyebamiji, Hui Yu, Scott Ness, Jeremy Chien, Fei Ye, Huining Kang, David C. Samuels, Sergey Ivanov, Danqian Chen, Ying-Yong Zhao, Yan Guo
2020 J jnl
Non-canonical RNA-DNA differences and other human genomic features are enriched within very short tandem repeats.
PLoS Comput. Biol.
Hui Yu, Shilin Zhao, Scott Ness, Huining Kang, Quanhu Sheng, David C. Samuels, Olufunmilola Oyebamiji, Ying-Yong Zhao, Yan Guo
2018 J jnl
Power and sample size calculations for high-throughput sequencing-based experiments.
Briefings Bioinform.
Chung-I Li, David C. Samuels, Ying-Yong Zhao, Yu Shyr, Yan Guo
2018 J jnl
Strategies for processing and quality control of Illumina genotyping arrays.
Briefings Bioinform.
Shilin Zhao, Jing Wang, David C. Samuels, Quanghu Sheng, Yu Shyr, Yan Guo
2017 — conf
Down syndrome prediction/screening model based on deep learning and illumina genotyping array.
BIBM
Bing Feng, David C. Samuels, William Hoskins, Yan Guo, Yan Zhang, Jijun Tang, Zibo Meng
2017 J jnl
StrandScript: evaluation of Illumina genotyping array design and strand correction.
Bioinform.
Jing Wang, David C. Samuels, Yu Shyr, Yan Guo
2016 J jnl
Mitochondria sequence mapping strategies and practicability of mitochondria variant detection from exome and RNA sequencing data.
Briefings Bioinform.
Pan Zhang, David C. Samuels, Brian D. Lehmann, Thomas Stricker, Jennifer A. Pietenpol, Yu Shyr, Yan Guo
2015 J jnl
Alternative applications for distinct RNA sequencing strategies.
Briefings Bioinform.
Leng Han, Kasey C. Vickers, David C. Samuels, Yan Guo
2015 J jnl
Genome measures used for quality control are dependent on gene function and ancestry.
Bioinform.
Jing Wang, Leon Raskin, David C. Samuels, Yu Shyr, Yan Guo
2015 J jnl
Population structure analysis on 2504 individuals across 26 ancestries using bioinformatics approaches.
BMC Bioinform.
Jing Wang, David C. Samuels, Yu Shyr, Yan Guo
2015 J jnl
Practicality of identifying mitochondria variants from exome and RNAseq data.
BMC Bioinform.
Pan Zhang, David C. Samuels, Brian D. Lehmann, Thomas Stricker, Jennifer A. Pietenpol, Yu Shyr, Yan Guo
2014 J jnl
Three-stage quality control strategies for DNA re-sequencing data.
Briefings Bioinform.
Yan Guo, Fei Ye, Quanghu Sheng, Travis Clark, David C. Samuels
2013 J jnl
MitoSeek: extracting mitochondria information and performing high-throughput mitochondria sequencing analysis.
Bioinform.
Yan Guo, Jiang Li, Chung-I Li, Yu Shyr, David C. Samuels
2012 — conf
The effect of unhealthy β-cells in synchronized insulin secretion.
BIBM
Yang Pu, Saangho Lee, David C. Samuels, Layne T. Watson, Yang Cao
2011 J jnl
Enzyme Kinetics of the Mitochondrial Deoxyribonucleoside Salvage Pathway Are Not Sufficient to Support Rapid mtDNA Replication.
PLoS Comput. Biol.
Vishal V. Gandhi, David C. Samuels
2011 J jnl
Replication Pauses of the Wild-Type and Mutant Mitochondrial DNA Polymerase Gamma: A Simulation Study.
PLoS Comput. Biol.
Zhuo Song, Yang Cao, David C. Samuels
2010 C conf
Hybrid Modeling and Simulation of Insulin Secretion Pathway in Pancreatic Islets.
BIBE
Yang Pu, Saangho Lee, David C. Samuels, Layne T. Watson, Yang Cao
2009 J jnl
An Analysis of Enzyme Kinetics Data for Mitochondrial DNA Strand Termination by Nucleoside Reverse Transcription Inhibitors.
PLoS Comput. Biol.
Katherine V. Wendelsdorf, Zhuo Song, Yang Cao, David C. Samuels
2009 — conf
Modeling of Metabolic Oscillations in Mitochondria and Their Coupling in a Cell.
BIOCOMP
Yang Pu, Saangho Lee, Zhen Liu, David C. Samuels, Layne T. Watson, Yang Cao
2004 Misc conf
A Simulation Methodology in Modeling Cell Divisions with Stochastic Effects.
WSC
Harsha Karur Rajasimha, David C. Samuels, Richard E. Nance