David A. Rand

15 papers Journal 15
YearRankTypeTitle / Venue / Authors
2024 J jnl
TimeTeller: A tool to probe the circadian clock as a multigene dynamical system.
PLoS Comput. Biol.
Denise Vlachou, Maria Veretennikova, Laura Usselmann, Vadim Vasilyev, Sascha Ott, Georg A. Bjarnason, Robert Dallmann, Francis Lévi, David A. Rand
2021 J jnl
Quantifying cell transitions in C. elegans with data-fitted landscape models.
PLoS Comput. Biol.
Elena Camacho-Aguilar, Aryeh Warmflash, David A. Rand
2020 J jnl
Multiplexing information flow through dynamic signalling systems.
PLoS Comput. Biol.
Giorgos Minas, Dan J. Woodcock, Louise Ashall, Claire V. Harper, Michael R. H. White, David A. Rand
2019 J jnl
Disentangling juxtacrine from paracrine signalling in dynamic tissue.
PLoS Comput. Biol.
Hiroshi Momiji, Kirsty L. Hassall, Karen Featherstone, Anne V. McNamara, Amanda L. Patist, David G. Spiller, Helen C. Christian, Michael R. H. White, Julian R. E. Davis, Bärbel F. Finkenstädt, David A. Rand
2017 J jnl
Inferring transcriptional logic from multiple dynamic experiments.
Bioinform.
Giorgos Minas, Dafyd J. Jenkins, David A. Rand, Bärbel Finkenstädt
2017 J jnl
Long-time analytic approximation of large stochastic oscillators: Simulation, analysis and inference.
PLoS Comput. Biol.
Giorgos Minas, David A. Rand
2017 J jnl
ReTrOS: a MATLAB toolbox for reconstructing transcriptional activity from gene and protein expression data.
BMC Bioinform.
Giorgos Minas, Hiroshi Momiji, Dafyd J. Jenkins, Maria J. Costa, David A. Rand, Bärbel Finkenstädt
2016 J jnl
PeTTSy: a computational tool for perturbation analysis of complex systems biology models.
BMC Bioinform.
Mirela Domijan, Paul E. Brown, Boris V. Shulgin, David A. Rand
2016 J jnl
Reconstruction of Cell Surface Densities of Ion Pumps, Exchangers, and Channels from mRNA Expression, Conductance Kinetics, Whole-Cell Calcium, and Current-Clamp Voltage Recordings, with an Application to Human Uterine Smooth Muscle Cells.
PLoS Comput. Biol.
Jolene Atia, Conor McCloskey, Anatoly S. Shmygol, David A. Rand, Hugo Antonius van den Berg, Andrew M. Blanks
2013 J jnl
A hierarchical model of transcriptional dynamics allows robust estimation of transcription rates in populations of single cells with variable gene copy number.
Bioinform.
Dan J. Woodcock, Keith W. Vance, Michal Komorowski, Georgy Koentges, Bärbel Finkenstädt, David A. Rand
2013 J jnl
A temporal switch model for estimating transcriptional activity in gene expression.
Bioinform.
Dafyd J. Jenkins, Bärbel Finkenstädt, David A. Rand
2010 J jnl
Robustness from flexibility in the fungal circadian clock.
BMC Syst. Biol.
Ozgur E. Akman, David A. Rand, Paul E. Brown, Andrew J. Millar
2009 J jnl
Bayesian inference of biochemical kinetic parameters using the linear noise approximation.
BMC Bioinform.
Michal Komorowski, Bärbel Finkenstädt, Claire V. Harper, David A. Rand
2008 J jnl
Reconstruction of transcriptional dynamics from gene reporter data using differential equations.
Bioinform.
Bärbel Finkenstädt, Elizabeth A. Heron, Michal Komorowski, Kieron D. Edwards, Sanyi Tang, Claire V. Harper, Julian R. E. Davis, Michael R. H. White, Andrew J. Millar, David A. Rand
2007 J jnl
Bayesian inference for dynamic transcriptional regulation; the Hes1 system as a case study.
Bioinform.
Elizabeth A. Heron, Bärbel Finkenstädt, David A. Rand