David A. Bader

295 papers A* 2A 28B 26C 6Misc 22Journal 98Unranked 88

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Continuous Fairness On Data Streams. CoRR Subhodeep Ghosh, Zhihui Du, Angela Bonifati, Manish Kumar, David A. Bader, Senjuti Basu Roy
2026	J	`jnl`	Linux and High-Performance Computing. CoRR David A. Bader
2026	J	`jnl`	MoMo - Combining Neuron Morphology and Connectivity for Interactive Motif Analysis in Connectomes. IEEE Trans. Vis. Comput. Graph. M. Shewarega, Jakob Troidl, Oliver Alvarado Rodriguez, Mohammad Dindoost, Philipp Harth, H. Haberkern, J. Stegmaier, David A. Bader, Hanspeter Pfister
2025	J	`jnl`	Cover Edge-Based Novel Triangle Counting. Algorithms David A. Bader, Fuhuan Li, Zhihui Du, Palina Pauliuchenka, Oliver Alvarado Rodriguez, Anant Gupta, Sai Sri Vastav Minnal, Valmik Nahata, Anya Ganeshan, Ahmet Gündogdu, Jason Lew
2025	—	`conf`	Designing Parallel Algorithms for Community Detection using Arachne. HPEC Fuhuan Li, Zhihui Du, David A. Bader
2025	J	`jnl`	Designing Parallel Algorithms for Community Detection using Arachne. CoRR Fuhuan Li, Zhihui Du, David A. Bader
2025	—	`conf`	Evaluating Efficiency and Novelty of LLM-Generated Code for Graph Analysis. HPEC Atieh Barati Nia, Mohammad Dindoost, David A. Bader
2025	J	`jnl`	Evaluating Efficiency and Novelty of LLM-Generated Code for Graph Analysis. CoRR Atieh Barati Nia, Mohammad Dindoost, David A. Bader
2025	—	`conf`	HiPerMotif: Novel Parallel Subgraph Isomorphism in Large-Scale Property Graphs. HPEC Mohammad Dindoost, Oliver Alvarado Rodriguez, Bartosz Bryg, Ioannis Koutis, David A. Bader
2025	J	`jnl`	HiPerMotif: Novel Parallel Subgraph Isomorphism in Large-Scale Property Graphs. CoRR Mohammad Dindoost, Oliver Alvarado Rodriguez, Bartosz Bryg, Ioannis Koutis, David A. Bader
2025	J	`jnl`	Large Scale Community-Aware Network Generation. CoRR Vikram Ramavarapu, João Alfredo Cardoso Lamy, Mohammad Dindoost, David A. Bader
2025	J	`jnl`	On the Optimization of Methods for Establishing Well-Connected Communities. CoRR Mohammad Dindoost, Oliver Alvarado Rodriguez, Bartosz Bryg, Minhyuk Park, George Chacko, Tandy J. Warnow, David A. Bader
2025	J	`jnl`	Rocket-crane algorithm for the Feedback Arc Set problem. Soc. Netw. Anal. Min. David A. Bader, Justin Ellis-Joyce, Gert-Jan Both, Srinivas C. Turaga, Harinarayan Asoori Sriram, Srijith Chinthalapudi, Zhihui Du
2025	—	`conf`	Wedge-Parallel Triangle Counting for GPUs. Euro-Par (3) Jeffrey Spaan, Kuan-Hsun Chen, David A. Bader, Ana Lucia Varbanescu
2024	—	`conf`	A Deployment Tool for Large Scale Graph Analytics Framework Arachne. HPEC Garrett Gonzalez-Rivas, Zhihui Du, David A. Bader
2024	J	`jnl`	Cover Edge-Based Novel Triangle Counting. CoRR David A. Bader, Fuhuan Li, Zhihui Du, Palina Pauliuchenka, Oliver Alvarado Rodriguez, Anant Gupta, Sai Sri Vastav Minnal, Valmik Nahata, Anya Ganeshan, Ahmet Gündogdu, Jason Lew
2024	—	`conf`	Enhanced Knowledge Graph Attention Networks for Efficient Graph Learning. HPEC Fernando Vera Buschmann, Zhihui Du, David A. Bader
2024	—	`conf`	Graph-Based Profiling of Dependency Vulnerability Remediation. SciSec Fernando Vera Buschmann, Palina Pauliuchenka, Ethan Oh, Bai Chien Kao, Louis DiValentin, David A. Bader
2024	J	`jnl`	Profile of Vulnerability Remediations in Dependencies Using Graph Analysis. CoRR Fernando Vera, Palina Pauliuchenka, Ethan Oh, Bai Chien Kao, Louis DiValentin, David A. Bader
2024	—	`conf`	VF2-PS: Parallel and Scalable Subgraph Monomorphism in Arachne. HPEC Mohammad Dindoost, Oliver Alvarado Rodriguez, Sounak Bagchi, Palina Pauliuchenka, Zhihui Du, David A. Bader
2023	J	`jnl`	Anomaly Detection in Catalog Streams. IEEE Trans. Big Data Chen Yang, Zhihui Du, Xiaofeng Meng, Xukang Zhang, Xinli Hao, David A. Bader
2023	—	`conf`	Billion-scale Detection of Isomorphic Nodes. IPDPS Workshops Luca Cappelletti, Tommaso Fontana, Justin T. Reese, David A. Bader
2023	Misc	`conf`	Contour Algorithm for Connectivity. HiPC Zhihui Du, Oliver Alvarado Rodriguez, Fuhuan Li, Mohammad Dindoost, David A. Bader
2023	J	`jnl`	Contour Algorithm for Connectivity. CoRR Zhihui Du, Oliver Alvarado Rodriguez, Fuhuan Li, Mohammad Dindoost, David A. Bader
2023	J	`jnl`	Dynamics signature based anomaly detection. Softw. Pract. Exp. Ivan Hendy Goenawan, Zhihui Du, Chao Wu, Yankui Sun, Jianyan Wei, David A. Bader
2023	—	`conf`	Fast Triangle Counting. HPEC David A. Bader
2023	J	`jnl`	Fast Triangle Counting. CoRR David A. Bader
2023	—	`conf`	Parallel Longest Common SubSequence Analysis In Chapel. HPEC Soroush Vahidi, Baruch Schieber, Zhihui Du, David A. Bader
2023	J	`jnl`	Parallel Longest Common SubSequence Analysis In Chapel. CoRR Soroush Vahidi, Baruch Schieber, Zhihui Du, David A. Bader
2023	—	`conf`	Parallel Triangles and Squares Count for Multigraphs Using Vertex Covers. ICCS (4) Luca Cappelletti, Tommaso Fontana, Oded Green, David A. Bader
2023	—	`conf`	Property Graphs in Arachne. HPEC Oliver Alvarado Rodriguez, Fernando Vera Buschmann, Zhihui Du, David A. Bader
2023	J	`jnl`	Property Graphs in Arachne. CoRR Oliver Alvarado Rodriguez, Fernando Vera Buschmann, Zhihui Du, David A. Bader
2023	—	`conf`	Triangle Counting Through Cover-Edges. HPEC David A. Bader, Fuhuan Li, Anya Ganeshan, Ahmet Gündogdu, Jason Lew, Oliver Alvarado Rodriguez, Zhihui Du
2023	J	`jnl`	Tunnel: Parallel-inducing sort for large string analytics. Future Gener. Comput. Syst. Zhihui Du, Sen Zhang, David A. Bader
2022	J	`jnl`	A Novel Parallel Triangle Counting Algorithm with Reduced Communication. CoRR David A. Bader, Fuhuan Li, Anya Ganeshan, Ahmet Gündogdu, Jason Lew, Oliver Alvarado Rodriguez, Zhihui Du
2022	J	`jnl`	A Simple and Efficient Algorithm for Finding Minimum Spanning Tree Replacement Edges. J. Graph Algorithms Appl. David A. Bader, Paul Burkhardt
2022	Misc	`conf`	High-Performance Truss Analytics in Arkouda. HIPC Zhihui Du, Joseph Patchett, Oliver Alvarado Rodriguez, Fuhuan Li, David A. Bader
2022	—	`ch.`	Interactive Graph Analytics at Scale in Arkouda. Massive Graph Analytics Zhihui Du, Oliver Alvarado Rodriguez, Joseph Patchett, David A. Bader
2022	—	`ch.`	Introduction to GraphBLAS. Massive Graph Analytics Jeremy Kepner, Peter Aaltonen, David A. Bader, Aydin Buluç, Franz Franchetti, John Gilbert, Shana Hutchison, Manoj Kumar, Andrew Lumsdaine, Henning Meyerhenke, Scott McMillan, José E. Moreira, John D. Owens, Carl Yang, Marcin Zalewski, Timothy G. Mattson
2022	—	`book`	Massive Graph Analytics David A. Bader
2022	—	`conf`	Parallel Suffix Sorting for Large String Analytics. PPAM (1) Zhihui Du, Sen Zhang, David A. Bader
2022	J	`jnl`	Scalable Katz Ranking Computation in Large Static and Dynamic Graphs. ACM J. Exp. Algorithmics Alexander van der Grinten, Elisabetta Bergamini, Oded Green, David A. Bader, Henning Meyerhenke
2022	J	`jnl`	Unprecedented cloud resolution in a GPU-enabled full-physics atmospheric climate simulation on OLCF's summit supercomputer. Int. J. High Perform. Comput. Appl. Matthew R. Norman, David A. Bader, Christopher Eldred, Walter M. Hannah, Benjamin R. Hillman, Christopher R. Jones, Jungmin M. Lee, L. Ruby Leung, Isaac Lyngaas, Kyle G. Pressel, Sarat Sreepathi, Mark A. Taylor, Xingqiu Yuan
2021	—	`conf`	A GraphBLAS Implementation of Triangle Centrality. HPEC Fuhuan Li, David A. Bader
2021	Misc	`conf`	Anti-Section Transitive Closure. HiPC Oded Green, Zhihui Du, Sanyamee Patel, Zehui Xie, Hang Liu, David A. Bader
2021	—	`conf`	Enabling Exploratory Large Scale Graph Analytics through Arkouda. HPEC Zhihui Du, Oliver Alvarado Rodriguez, David A. Bader
2021	J	`jnl`	Interactive Graph Stream Analytics in Arkouda. Algorithms Zhihui Du, Oliver Alvarado Rodriguez, Joseph Patchett, David A. Bader
2021	—	`conf`	Interactive data science at scale. CF David A. Bader
2021	—	`conf`	LAGraph: Linear Algebra, Network Analysis Libraries, and the Study of Graph Algorithms. IPDPS Workshops Gábor Szárnyas, David A. Bader, Timothy A. Davis, James Kitchen, Timothy G. Mattson, Scott McMillan, Erik Welch
2021	J	`jnl`	LAGraph: Linear Algebra, Network Analysis Libraries, and the Study of Graph Algorithms. CoRR Gábor Szárnyas, David A. Bader, Timothy A. Davis, James Kitchen, Timothy G. Mattson, Scott McMillan, Erik Welch
2021	—	`conf`	Large Scale String Analytics in Arkouda. HPEC Zhihui Du, Oliver Alvarado Rodriguez, David A. Bader
2021	J	`jnl`	Linux and Supercomputing: How My Passion for Building COTS Systems Led to an HPC Revolution. IEEE Ann. Hist. Comput. David A. Bader
2020	A*	`conf`	Accelerating and Expanding End-to-End Data Science Workflows with DL/ML Interoperability Using RAPIDS. KDD Bartley Richardson, Bradley Rees, Tom Drabas, Even Oldridge, David A. Bader, Rachel Allen
2020	—	`conf`	An Efficient LP Rounding Scheme for Replica Placement. HPEC Zhihui Du, Sen Zhang, David A. Bader, Jingkun Hu
2020	—	`conf`	GPU Accelerated Anomaly Detection of Large Scale Light Curves. HPEC Austin Chase Minor, Zhihui Du, Yankui Sun, David A. Bader, Chao Wu, Jianyan Wei
2020	—	`conf`	QoS-Aware and Fault-Tolerant Replica Placement. ICA3PP (2) Jingkun Hu, Zhihui Du, Sen Zhang, David A. Bader
2020	J	`jnl`	Traversing Large Graphs on GPUs with Unified Memory. Proc. VLDB Endow. Prasun Gera, Hyojong Kim, Piyush Sao, Hyesoon Kim, David A. Bader
2020	—	`conf`	Using RAPIDS AI to Accelerate Graph Data Science Workflows. HPEC Todd Hricik, David A. Bader, Oded Green
2019	J	`jnl`	A Linear Time Algorithm for Finding Minimum Spanning Tree Replacement Edges. CoRR David A. Bader, Paul Burkhardt
2019	J	`jnl`	Editorial from the Editor-in-Chief. ACM Trans. Parallel Comput. David A. Bader
2019	—	`conf`	Performance Impact of Memory Channels on Sparse and Irregular Algorithms. IA3@SC Oded Green, James Fox, Jeffrey Young, Jun Shirako, David A. Bader
2019	J	`jnl`	Performance Impact of Memory Channels on Sparse and Irregular Algorithms. CoRR Oded Green, James Fox, Jeffrey Young, Jun Shirako, David A. Bader
2019	—	`conf`	Skip the Intersection: Quickly Counting Common Neighbors on Shared-Memory Systems. HPEC Xiaojing An, Kasimir Gabert, James Fox, Oded Green, David A. Bader
2019	J	`jnl`	Tailoring parallel alternating criteria search for domain specific MIPs: Application to maritime inventory routing. Comput. Oper. Res. Lluís-Miquel Munguía, Shabbir Ahmed, David A. Bader, George L. Nemhauser, Yufen Shao, Dimitri J. Papageorgiou
2018	J	`jnl`	Accelerating GPU betweenness centrality. Commun. ACM Adam McLaughlin, David A. Bader
2018	J	`jnl`	Alternating criteria search: a parallel large neighborhood search algorithm for mixed integer programs. Comput. Optim. Appl. Lluís-Miquel Munguía, Shabbir Ahmed, David A. Bader, George L. Nemhauser, Yufen Shao
2018	—	`ch.`	Benchmarking for Graph Clustering and Partitioning. Encyclopedia of Social Network Analysis and Mining. 2nd Ed. David A. Bader, Andrea Kappes, Henning Meyerhenke, Peter Sanders, Christian Schulz, Dorothea Wagner
2018	—	`conf`	Fast and Adaptive List Intersections on the GPU. HPEC James Fox, Oded Green, Kasimir Gabert, Xiaojing An, David A. Bader
2018	—	`conf`	Hornet: An Efficient Data Structure for Dynamic Sparse Graphs and Matrices on GPUs. HPEC Federico Busato, Oded Green, Nicola Bombieri, David A. Bader
2018	J	`jnl`	Incrementally updating Katz centrality in dynamic graphs. Soc. Netw. Anal. Min. Eisha Nathan, David A. Bader
2018	—	`conf`	Introduction to HiCOMB 2018. IPDPS Workshops Srinivas Aluru, David A. Bader, Paul Medvedev
2018	—	`conf`	Logarithmic Radix Binning and Vectorized Triangle Counting. HPEC Oded Green, James Fox, Alex Watkins, Alok Tripathy, Kasimir Gabert, Euna Kim, Xiaojing An, Kumar Aatish, David A. Bader
2018	B	`conf`	Massive-scale Streaming Analytics: Models, Parallelism, & Real-world Applications. SPAA David A. Bader
2018	J	`jnl`	Numerically approximating centrality for graph ranking guarantees. J. Comput. Sci. Eisha Nathan, Geoffrey Sanders, Van Emden Henson, David A. Bader
2018	A	`conf`	Scalable Katz Ranking Computation in Large Static and Dynamic Graphs. ESA Alexander van der Grinten, Elisabetta Bergamini, Oded Green, David A. Bader, Henning Meyerhenke
2018	J	`jnl`	Scalable Katz Ranking Computation in Large Static and Dynamic Graphs. CoRR Alexander van der Grinten, Elisabetta Bergamini, Oded Green, David A. Bader, Henning Meyerhenke
2017	B	`conf`	A Dynamic Algorithm for Updating Katz Centrality in Graphs. ASONAM Eisha Nathan, David A. Bader
2017	J	`jnl`	A parallel local search framework for the Fixed-Charge Multicommodity Network Flow problem. Comput. Oper. Res. Lluís-Miquel Munguía, Shabbir Ahmed, David A. Bader, George L. Nemhauser, Vikas Goel, Yufen Shao
2017	—	`conf`	Approximating Personalized Katz Centrality in Dynamic Graphs. PPAM (1) Eisha Nathan, David A. Bader
2017	—	`conf`	Design and implementation of parallel PageRank on multicore platforms. HPEC Shijie Zhou, Kartik Lakhotia, Shreyas G. Singapura, Hanqing Zeng, Rajgopal Kannan, Viktor K. Prasanna, James Fox, Euna Kim, Oded Green, David A. Bader
2017	J	`jnl`	Designing and implementing a heuristic cross-architecture combination for graph traversal. J. Parallel Distributed Comput. Yang You, Haohuan Fu, David A. Bader, Guangwen Yang
2017	J	`jnl`	Editor's Note. IEEE Trans. Parallel Distributed Syst. David A. Bader
2017	J	`jnl`	Editor's Note. IEEE Trans. Parallel Distributed Syst. David A. Bader
2017	Misc	`conf`	Exact and Parallel Triangle Counting in Dynamic Graphs. HiPC Devavret Makkar, David A. Bader, Oded Green
2017	J	`jnl`	Exemplar or Matching: Modeling DCJ Problems with Unequal Content Genome Data. CoRR Zhaoming Yin, Jijun Tang, Stephen W. Schaeffer, David A. Bader
2017	Misc	`conf`	Graph Ranking Guarantees for Numerical Approximations to Katz Centrality. ICCS Eisha Nathan, Geoffrey Sanders, James P. Fairbanks, Van Emden Henson, David A. Bader
2017	—	`conf`	Introduction to EMBRACE Workshop. IPDPS Workshops David A. Bader
2017	J	`jnl`	Local Community Detection in Dynamic Graphs Using Personalized Centrality. Algorithms Eisha Nathan, Anita Zakrzewska, E. Jason Riedy, David A. Bader
2017	J	`jnl`	Modeling the Power Variability of Core Speed Scaling on Homogeneous Multicore Systems. Sci. Program. Zhihui Du, Rong Ge, Victor W. Lee, Richard W. Vuduc, David A. Bader, Ligang He
2017	—	`conf`	Quickly finding a truss in a haystack. HPEC Oded Green, James Fox, Euna Kim, Federico Busato, Nicola Bombieri, Kartik Lakhotia, Shijie Zhou, Shreyas G. Singapura, Hanqing Zeng, Rajgopal Kannan, Viktor K. Prasanna, David A. Bader
2017	—	`conf`	Ranking in Dynamic Graphs Using Exponential Centrality. COMPLEX NETWORKS Eisha Nathan, James P. Fairbanks, David A. Bader
2017	J	`jnl`	Spectral partitioning with blends of eigenvectors. J. Complex Networks James P. Fairbanks, David A. Bader, Geoffrey D. Sanders
2017	B	`conf`	Streaming Graph Sampling with Size Restrictions. ASONAM Anita Zakrzewska, David A. Bader
2017	—	`conf`	When Good Enough Is Better: Energy-Aware Scheduling for Multicore Servers. IPDPS Workshops Xinning Hui, Zhihui Du, Jason Liu, Hongyang Sun, Yuxiong He, David A. Bader
2016	—	`conf`	A Memory and Time Scalable Parallelization of the Reptile Error-Correction Code. IPDPS Workshops Vipin Sachdeva, Srinivas Aluru, David A. Bader
2016	J	`jnl`	A New Parallel Method for Binary Black Hole Simulations. Sci. Program. Quan Yang, Zhihui Du, Zhou-Jian Cao, Jian Tao, David A. Bader
2016	B	`conf`	A local measure of community change in dynamic graphs. ASONAM Anita Zakrzewska, Eisha Nathan, James P. Fairbanks, David A. Bader
2016	B	`conf`	Aging data in dynamic graphs: A comparative study. ASONAM Anita Zakrzewska, David A. Bader
2016	J	`jnl`	Editor's Note. IEEE Trans. Parallel Distributed Syst. David A. Bader
2016	—	`ch.`	Engineering Algorithms for Computational Biology. Encyclopedia of Algorithms David A. Bader
2016	J	`jnl`	Evolving MPI+X Toward Exascale. Computer David A. Bader
2016	J	`jnl`	Exemplar or matching: modeling DCJ problems with unequal content genome data. J. Comb. Optim. Zhaoming Yin, Jijun Tang, Stephen W. Schaeffer, David A. Bader
2016	—	`conf`	GABB 2016 Keynote. IPDPS Workshops David A. Bader
2016	J	`jnl`	HPC node performance and energy modeling with the co-location of applications. J. Supercomput. Daniel Dauwe, Eric Jonardi, Ryan D. Friese, Sudeep Pasricha, Anthony A. Maciejewski, David A. Bader, Howard Jay Siegel
2016	—	`conf`	HiCOMB Introduction and Committees. IPDPS Workshops Srinivas Aluru, David A. Bader, Ananth Kalyanaraman, Jaroslaw Zola
2016	—	`ch.`	High Performance Algorithm Engineering for Large-Scale Problems. Encyclopedia of Algorithms David A. Bader
2016	J	`jnl`	Mathematical Foundations of the GraphBLAS. CoRR Jeremy Kepner, Peter Aaltonen, David A. Bader, Aydin Buluç, Franz Franchetti, John R. Gilbert, Dylan Hutchison, Manoj Kumar, Andrew Lumsdaine, Henning Meyerhenke, Scott McMillan, José E. Moreira, John D. Owens, Carl Yang, Marcin Zalewski, Timothy G. Mattson
2016	—	`conf`	Mathematical foundations of the GraphBLAS. HPEC Jeremy Kepner, Peter Aaltonen, David A. Bader, Aydin Buluç, Franz Franchetti, John R. Gilbert, Dylan Hutchison, Manoj Kumar, Andrew Lumsdaine, Henning Meyerhenke, Scott McMillan, Carl Yang, John D. Owens, Marcin Zalewski, Timothy G. Mattson, José E. Moreira
2016	B	`conf`	New stopping criteria for spectral partitioning. ASONAM James P. Fairbanks, Anita Zakrzewska, David A. Bader
2016	—	`ch.`	Sorting Signed Permutations by Reversal (Reversal Distance). Encyclopedia of Algorithms David A. Bader
2016	J	`jnl`	Tracking local communities in streaming graphs with a dynamic algorithm. Soc. Netw. Anal. Min. Anita Zakrzewska, David A. Bader
2016	—	`conf`	cuSTINGER: Supporting dynamic graph algorithms for GPUs. HPEC Oded Green, David A. Bader
2015	B	`conf`	A Dynamic Algorithm for Local Community Detection in Graphs. ASONAM Anita Zakrzewska, David A. Bader
2015	—	`conf`	A Methodology for Co-Location Aware Application Performance Modeling in Multicore Computing. IPDPS Workshops Daniel Dauwe, Eric Jonardi, Ryan D. Friese, Sudeep Pasricha, Anthony A. Maciejewski, David A. Bader, Howard Jay Siegel
2015	—	`conf`	A fast, energy-efficient abstraction for simultaneous breadth-first searches. HPEC Adam McLaughlin, E. Jason Riedy, David A. Bader
2015	J	`jnl`	Behavioral clusters in dynamic graphs. Parallel Comput. James P. Fairbanks, Ramakrishnan Kannan, Haesun Park, David A. Bader
2015	J	`jnl`	Editor's Note. IEEE Trans. Parallel Distributed Syst. David A. Bader
2015	B	`conf`	Fast Execution of Simultaneous Breadth-First Searches on Sparse Graphs. ICPADS Adam McLaughlin, David A. Bader
2015	—	`conf`	Fast Incremental Community Detection on Dynamic Graphs. PPAM (1) Anita Zakrzewska, David A. Bader
2015	Misc	`conf`	Graphs, Matrices, and the GraphBLAS: Seven Good Reasons. ICCS Jeremy Kepner, David A. Bader, Aydin Buluç, John R. Gilbert, Timothy G. Mattson, Henning Meyerhenke
2015	J	`jnl`	Graphs, Matrices, and the GraphBLAS: Seven Good Reasons. CoRR Jeremy Kepner, David A. Bader, Aydin Buluç, John R. Gilbert, Timothy G. Mattson, Henning Meyerhenke
2015	—	`conf`	HiCOMB Introduction and Committees. IPDPS Workshops Sanguthevar Rajasekaran, Srinivas Aluru, David A. Bader
2015	—	`conf`	ParLearning Keynotes. IPDPS Workshops David A. Bader, Yihua Huang, Ananth Kalyanaraman
2015	B	`conf`	Parallel Methods for Verifying the Consistency of Weakly-Ordered Architectures. PACT Adam McLaughlin, Duane Merrill, Michael Garland, David A. Bader
2015	J	`jnl`	Spectral Partitioning with Blends of Eigenvectors. CoRR James P. Fairbanks, Geoffrey D. Sanders, David A. Bader
2015	J	`jnl`	State of the Journal. IEEE Trans. Computers David A. Bader
2015	J	`jnl`	WEC: Improving Durability of SSD Cache Drives by Caching Write-Efficient Data. IEEE Trans. Computers Yunpeng Chai, Zhihui Du, Xiao Qin, David A. Bader
2014	Misc	`conf`	A Lin-Kernighan Heuristic for the DCJ Median Problem of Genomes with Unequal Contents. COCOON Zhaoming Yin, Jijun Tang, Stephen W. Schaeffer, David A. Bader
2014	—	`conf`	A performance evaluation of open source graph databases. PPAA@PPoPP Robert Campbell McColl, David Ediger, Jason Poovey, Dan Campbell, David A. Bader
2014	—	`ch.`	Benchmarking for Graph Clustering and Partitioning. Encyclopedia of Social Network Analysis and Mining David A. Bader, Henning Meyerhenke, Peter Sanders, Christian Schulz, Andrea Kappes, Dorothea Wagner
2014	B	`conf`	Designing a Heuristic Cross-Architecture Combination for Breadth-First Search. ICPP Yang You, David A. Bader, Maryam Mehri Dehnavi
2014	—	`conf`	GABB Introduction. IPDPS Workshops Tim Mattson, David A. Bader, Aydin Buluç, John R. Gilbert, Joseph Gonzalez, Jeremy Kepner
2014	—	`conf`	HiCOMB Introduction and Committees. IPDPS Workshops Alba Cristina Magalhaes Alves de Melo, Srinivas Aluru, David A. Bader
2014	J	`jnl`	Introduction to Special Issue ALENEX'12. ACM J. Exp. Algorithmics David A. Bader, Petra Mutzel
2014	—	`conf`	Load balanced clustering coefficients. PPAA@PPoPP Oded Green, Lluís-Miquel Munguía, David A. Bader
2014	—	`conf`	Optimizing energy consumption and parallel performance for static and dynamic betweenness centrality using GPUs. HPEC Adam McLaughlin, E. Jason Riedy, David A. Bader
2014	—	`conf`	Revisiting Edge and Node Parallelism for Dynamic GPU Graph Analytics. IPDPS Workshops Adam McLaughlin, David A. Bader
2014	A	`conf`	Scalable and High Performance Betweenness Centrality on the GPU. SC Adam McLaughlin, David A. Bader
2014	J	`jnl`	Standards for Graph Algorithm Primitives. CoRR Tim Mattson, David A. Bader, Jonathan W. Berry, Aydin Buluç, Jack J. Dongarra, Christos Faloutsos, John Feo, John R. Gilbert, Joseph Gonzalez, Bruce Hendrickson, Jeremy Kepner, Charles E. Leiserson, Andrew Lumsdaine, David A. Padua, Stephen W. Poole, Steven P. Reinhardt, Mike Stonebraker, Steve Wallach, Andrew Yoo
2014	J	`jnl`	State of the Journal. IEEE Trans. Parallel Distributed Syst. David A. Bader
2013	J	`jnl`	A Brief Study of Open Source Graph Databases. CoRR Robert McColl, David Ediger, Jason Poovey, Dan Campbell, David A. Bader
2013	Misc	`conf`	A new parallel algorithm for connected components in dynamic graphs. HiPC Robert McColl, Oded Green, David A. Bader
2013	B	`conf`	A statistical framework for streaming graph analysis. ASONAM James P. Fairbanks, David Ediger, Robert McColl, David A. Bader, Eric Gilbert
2013	—	`conf`	Designing Hybrid Architectures for Massive-Scale Graph Analysis. IPDPS Workshops David Ediger, David A. Bader
2013	A*	`conf`	Detecting insider threats in a real corporate database of computer usage activity. KDD Ted E. Senator, Henry G. Goldberg, Alex Memory, William T. Young, Brad Rees, Robert Pierce, Daniel Huang, Matthew Reardon, David A. Bader, Edmond Chow, Irfan A. Essa, Joshua Jones, Vinay Bettadapura, Duen Horng Chau, Oded Green, Oguz Kaya, Anita Zakrzewska, Erica Briscoe, Rudolph L. Mappus IV, Robert McColl, Lora Weiss, Thomas G. Dietterich, Alan Fern, Weng-Keen Wong, Shubhomoy Das, Andrew Emmott, Jed Irvine, Jay Yoon Lee, Danai Koutra, Christos Faloutsos, Daniel D. Corkill, Lisa Friedland, Amanda Gentzel, David D. Jensen
2013	A	`conf`	Energy-Efficient Scheduling for Best-Effort Interactive Services to Achieve High Response Quality. IPDPS Zhihui Du, Hongyang Sun, Yuxiong He, Yu He, David A. Bader, Huazhe Zhang
2013	Misc	`conf`	Faster Betweenness Centrality Based on Data Structure Experimentation. ICCS Oded Green, David A. Bader
2013	—	`conf`	Faster Clustering Coefficient Using Vertex Covers. SocialCom Oded Green, David A. Bader
2013	—	`ed.`	Graph Partitioning and Graph Clustering, 10th DIMACS Implementation Challenge Workshop, Georgia Institute of Technology, Atlanta, GA, USA, February 13-14, 2012. Proceedings Graph Partitioning and Graph Clustering David A. Bader, Henning Meyerhenke, Peter Sanders, Dorothea Wagner
2013	J	`jnl`	GraphCT: Multithreaded Algorithms for Massive Graph Analysis. IEEE Trans. Parallel Distributed Syst. David Ediger, Karl Jiang, E. Jason Riedy, David A. Bader
2013	—	`conf`	HiCOMB Introduction. IPDPS Workshops Jaroslaw Zola, David A. Bader, Srinivas Aluru
2013	—	`conf`	Investigating Graph Algorithms in the BSP Model on the Cray XMT. IPDPS Workshops David Ediger, David A. Bader
2013	J	`jnl`	Massive streaming data analytics: a graph-based approach. XRDS E. Jason Riedy, David A. Bader
2013	—	`conf`	Measuring the Sensitivity of Graph Metrics to Missing Data. PPAM (1) Anita Zakrzewska, David A. Bader
2013	—	`conf`	Multithreaded Community Monitoring for Massive Streaming Graph Data. IPDPS Workshops E. Jason Riedy, David A. Bader
2013	J	`jnl`	PASQUAL: Parallel Techniques for Next Generation Genome Sequence Assembly. IEEE Trans. Parallel Distributed Syst. Xing Liu, Pushkar R. Pande, Henning Meyerhenke, David A. Bader
2013	—	`conf`	Standards for graph algorithm primitives. HPEC Tim Mattson, David A. Bader, Jonathan W. Berry, Aydin Buluç, Jack J. Dongarra, Christos Faloutsos, John Feo, John R. Gilbert, Joseph Gonzalez, Bruce Hendrickson, Jeremy Kepner, Charles E. Leiserson, Andrew Lumsdaine, David A. Padua, Stephen Poole, Steven P. Reinhardt, Mike Stonebraker, Steve Wallach, Andrew Yoo
2013	Misc	`conf`	Streaming Breakpoint Graph Analytics for Accelerating and Parallelizing the Computation of DCJ Median of Three Genomes. ICCS Zhaoming Yin, Jijun Tang, Stephen W. Schaeffer, David A. Bader
2013	J	`jnl`	Sustainable Software Development for Next-Gen Sequencing (NGS) Bioinformatics on Emerging Platforms. CoRR Shel Swenson, Yogesh Simmhan, Viktor K. Prasanna, Manish Parashar, E. Jason Riedy, David A. Bader, Richard W. Vuduc
2012	—	`conf`	A Fast Algorithm for Streaming Betweenness Centrality. SocialCom/PASSAT Oded Green, Robert McColl, David A. Bader
2012	J	`jnl`	ACM journal on experimental algorithmics special issue on multicore algorithms. ACM J. Exp. Algorithmics David A. Bader, Philippas Tsigas
2012	Misc	`conf`	Analysis of streaming social networks and graphs on multicore architectures. ICASSP E. Jason Riedy, Henning Meyerhenke, David A. Bader, David Ediger, Timothy G. Mattson
2012	J	`jnl`	Efficient Data Migration to Conserve Energy in Streaming Media Storage Systems. IEEE Trans. Parallel Distributed Syst. Yunpeng Chai, Zhihui Du, David A. Bader, Xiao Qin
2012	—	`conf`	Enhancing Cache Coherent Architectures with access patterns for embedded manycore systems. ISSoC Jussara Marandola, Stéphane Louise, Loïc Cudennec, Jean-Thomas Acquaviva, David A. Bader
2012	A	`conf`	GPU merge path: a GPU merging algorithm. ICS Oded Green, Robert McColl, David A. Bader
2012	—	`conf`	HCW 2012 Keynote Talk: Analyzing massive data using heterogeneous computing. IPDPS Workshops David A. Bader
2012	—	`conf`	HiCOMB Introduction. IPDPS Workshops Mark J. Clement, Quinn Snell, Srinivas Aluru, David A. Bader
2012	—	`conf`	Parallel community detection for massive graphs. Graph Partitioning and Graph Clustering E. Jason Riedy, Henning Meyerhenke, David Ediger, David A. Bader
2012	A	`ed.`	Proceedings of the 14th Meeting on Algorithm Engineering & Experiments, ALENEX 2012, The Westin Miyako, Kyoto, Japan, January 16, 2012 ALENEX David A. Bader, Petra Mutzel
2012	—	`conf`	STINGER: High performance data structure for streaming graphs. HPEC David Ediger, Robert McColl, E. Jason Riedy, David A. Bader
2012	—	`conf`	Scalable Multi-threaded Community Detection in Social Networks. IPDPS Workshops E. Jason Riedy, David A. Bader, Henning Meyerhenke
2012	Misc	`conf`	Task-based parallel breadth-first search in heterogeneous environments. HiPC Lluís-Miquel Munguía, David A. Bader, Eduard Ayguadé
2011	—	`conf`	A Waterfall Model to Achieve Energy Efficient Tasks Mapping for Large Scale GPU Clusters. IPDPS Workshops Wenjie Liu, Zhihui Du, Yu Xiao, David A. Bader, Chen Xu
2011	J	`jnl`	Algorithm Engineering Challenges in Multicore and Manycore Systems. it Inf. Technol. Seunghwa Kang, David Ediger, David A. Bader
2011	—	`ch.`	Fundamental Questions in the Analysis of Large Graphs. Graph Algorithms in the Language of Linear Algebra Jeremy Kepner, David A. Bader, Robert Bond, Nadya T. Bliss, Christos Faloutsos, Bruce Hendrickson, John R. Gilbert, Eric Robinson
2011	—	`ch.`	Graph Algorithms. Encyclopedia of Parallel Computing David A. Bader, Guojing Cong
2011	J	`jnl`	Guest Editor's Introduction: Special Issue on High-Performance Computing with Accelerators. IEEE Trans. Parallel Distributed Syst. David A. Bader, David R. Kaeli, Volodymyr V. Kindratenko
2011	—	`conf`	HiCOMB Introduction. IPDPS Workshops Ananth Kalyanaraman, Srinivas Aluru, David A. Bader
2011	—	`ch.`	Hybrid Programming With SIMPLE. Encyclopedia of Parallel Computing Guojing Cong, David A. Bader
2011	—	`ch.`	Large-Scale Network Analysis. Graph Algorithms in the Language of Linear Algebra David A. Bader, Christine E. Heitsch, Kamesh Madduri
2011	J	`jnl`	On the random access performance of Cell Broadband Engine with graph analysis application CoRR Mingyu Chen, David A. Bader, Seunghwa Kang
2011	—	`conf`	Parallel Community Detection for Massive Graphs. PPAM (1) E. Jason Riedy, Henning Meyerhenke, David Ediger, David A. Bader
2011	—	`ch.`	SWARM: A Parallel Programming Framework for Multicore Processors. Encyclopedia of Parallel Computing David A. Bader, Guojing Cong
2011	—	`ch.`	Spanning Tree, Minimum Weight. Encyclopedia of Parallel Computing David A. Bader, Guojing Cong
2011	—	`conf`	Tracking Structure of Streaming Social Networks. IPDPS Workshops David Ediger, E. Jason Riedy, David A. Bader, Henning Meyerhenke
2010	—	`conf`	A tile-based parallel Viterbi algorithm for biological sequence alignment on GPU with CUDA. IPDPS Workshops Zhihui Du, Zhaoming Yin, David A. Bader
2010	—	`conf`	Analyzing Massive Social Networks Using Multicore and Multithreaded Architectures. Facing the Multicore-Challenge David A. Bader
2010	—	`ch.`	Combinatorial Algorithm Design on the Cell/B.E. Processor. Scientific Computing with Multicore and Accelerators David A. Bader, Virat Agarwal, Kamesh Madduri, Fabrizio Petrini
2010	—	`ch.`	Designing Fast Fourier Transform for the IBM Cell Broadband Engine. Scientific Computing with Multicore and Accelerators Virat Agarwal, David A. Bader
2010	C	`conf`	Evaluating Cell/B.E software cache for ClustalW. ISCAS Vipin Sachdeva, Michael Kistler, David A. Bader
2010	—	`conf`	Large scale complex network analysis using the hybrid combination of a MapReduce cluster and a highly multithreaded system. IPDPS Workshops Seunghwa Kang, David A. Bader
2010	B	`conf`	Massive Social Network Analysis: Mining Twitter for Social Good. ICPP David Ediger, Karl Jiang, E. Jason Riedy, David A. Bader, Courtney D. Corley, Robert M. Farber, William N. Reynolds
2010	—	`conf`	Massive streaming data analytics: A case study with clustering coefficients. IPDPS Workshops David Ediger, Karl Jiang, E. Jason Riedy, David A. Bader
2010	A	`conf`	Message from general chair. IPDPS David A. Bader
2010	—	`conf`	Message from the workshop chairs. IPDPS Workshops George Karypis, Srinivas Aluru, David A. Bader
2010	—	`conf`	On accelerating iterative algorithms with CUDA: A case study on Conditional Random Fields training algorithm for biological sequence alignment. BIBM Workshops Zhihui Du, Zhaoming Yin, Wenjie Liu, David A. Bader
2010	A	`conf`	Scalable Graph Exploration on Multicore Processors. SC Virat Agarwal, Fabrizio Petrini, Davide Pasetto, David A. Bader
2010	—	`book`	Scientific Computing with Multicore and Accelerators. Jakub Kurzak, David A. Bader, Jack J. Dongarra
2009	B	`conf`	A Partition-Merge Based Cache-Conscious Parallel Sorting Algorithm for CMP with Shared Cache. ICPP Song Hao, Zhihui Du, David A. Bader, Yin Ye
2009	A	`conf`	A faster parallel algorithm and efficient multithreaded implementations for evaluating betweenness centrality on massive datasets. IPDPS Kamesh Madduri, David Ediger, Karl Jiang, David A. Bader, Daniel G. Chavarría-Miranda
2009	B	`conf`	An efficient transactional memory algorithm for computing minimum spanning forest of sparse graphs. PPoPP Seunghwa Kang, David A. Bader
2009	A	`conf`	Compact graph representations and parallel connectivity algorithms for massive dynamic network analysis. IPDPS Kamesh Madduri, David A. Bader
2009	J	`jnl`	Computing discrete transforms on the Cell Broadband Engine. Parallel Comput. David A. Bader, Virat Agarwal, Seunghwa Kang
2009	J	`jnl`	Faster FAST: multicore acceleration of streaming financial data. Comput. Sci. Res. Dev. Virat Agarwal, David A. Bader, Lin Dan, Lurng-Kuo Liu, Davide Pasetto, Michael Perrone, Fabrizio Petrini
2009	B	`conf`	Generalizing k-Betweenness Centrality Using Short Paths and a Parallel Multithreaded Implementation. ICPP Karl Jiang, David Ediger, David A. Bader
2009	—	`conf`	Simulating Individual-Based Models of Epidemics in Hierarchical Networks. ICCS (1) Rick Quax, David A. Bader, Peter M. A. Sloot
2009	A	`conf`	Understanding the design trade-offs among current multicore systems for numerical computations. IPDPS Seunghwa Kang, David A. Bader, Richard W. Vuduc
2008	C	`conf`	A Prediction Based CMP Cache Migration Policy. HPCC Song Hao, Zhihui Du, David A. Bader, Man Wang
2008	J	`jnl`	A graph-theoretic analysis of the human protein-interaction network using multicore parallel algorithms. Parallel Comput. David A. Bader, Kamesh Madduri
2008	A	`conf`	DOSA: design optimizer for scientific applications. IPDPS David A. Bader, Viktor K. Prasanna
2008	—	`ch.`	Engineering Algorithms for Computational Biology. Encyclopedia of Algorithms David A. Bader
2008	A	`conf`	Financial modeling on the cell broadband engine. IPDPS Virat Agarwal, Lurng-Kuo Liu, David A. Bader
2008	—	`ch.`	High Performance Algorithm Engineering for Large-scale Problems. Encyclopedia of Algorithms David A. Bader
2008	A	`conf`	High performance MPEG-2 software decoder on the cell broadband engine. IPDPS David A. Bader, Sulabh Patel
2008	J	`jnl`	High-performance computational biology. Parallel Comput. David A. Bader, Srinivas Aluru
2008	B	`conf`	On the Design of Fast Pseudo-Random Number Generators for the Cell Broadband Engine and an Application to Risk Analysis. ICPP David A. Bader, Aparna Chandramowlishwaran, Virat Agarwal
2008	B	`conf`	Optimizing JPEG2000 Still Image Encoding on the Cell Broadband Engine. ICPP Seunghwa Kang, David A. Bader
2008	Misc	`conf`	Petascale Computing for Large-Scale Graph Problems. CISIS David A. Bader
2008	A	`conf`	SNAP, Small-world Network Analysis and Partitioning: An open-source parallel graph framework for the exploration of large-scale networks. IPDPS David A. Bader, Kamesh Madduri
2008	—	`ch.`	Sorting Signed Permutations by Reversal (Reversal Distance). Encyclopedia of Algorithms David A. Bader
2007	A	`conf`	A Graph-Theoretic Analysis of the Human Protein-Interaction Network Using Multicore Parallel Algorithms. IPDPS David A. Bader, Kamesh Madduri
2007	A	`conf`	Advanced Shortest Paths Algorithms on a Massively-Multithreaded Architecture. IPDPS Joseph R. Crobak, Jonathan W. Berry, Kamesh Madduri, David A. Bader
2007	A	`conf`	An Experimental Study of A Parallel Shortest Path Algorithm for Solving Large-Scale Graph Instances. ALENEX Kamesh Madduri, David A. Bader, Jonathan W. Berry, Joseph R. Crobak
2007	C	`conf`	Approximating Betweenness Centrality. WAW David A. Bader, Shiva Kintali, Kamesh Madduri, Milena Mihail
2007	A	`conf`	DOSA: Design Optimizer for Scientific Applications. IPDPS David A. Bader, Viktor K. Prasanna
2007	—	`ch.`	Design of Multithreaded Algorithms for Combinatorial Problems. Handbook of Parallel Computing Kamesh Madduri, John Feo, Guojing Cong, David A. Bader
2007	J	`jnl`	Dynamic Load Balancing in Distributed Systems in the Presence of Delays: A Regeneration-Theory Approach. IEEE Trans. Parallel Distributed Syst. Sagar Dhakal, Majeed M. Hayat, Jorge E. Pezoa, Cundong Yang, David A. Bader
2007	—	`ch.`	Efficient Parallel Graph Algorithms for Multicore and Multiprocessors. Handbook of Parallel Computing Guojing Cong, David A. Bader
2007	Misc	`conf`	FFTC: Fastest Fourier Transform for the IBM Cell Broadband Engine. HiPC David A. Bader, Virat Agarwal
2007	J	`jnl`	High performance combinatorial algorithm design on the Cell Broadband Engine processor. Parallel Comput. David A. Bader, Virat Agarwal, Kamesh Madduri, Seunghwa Kang
2007	C	`conf`	Lecture on Progress toward Petascale Applications in Bioinformatics and Computational Biology. BIBE Craig A. Stewart, Malinda Lingwall, David A. Bader
2007	A	`conf`	On the Design and Analysis of Irregular Algorithms on the Cell Processor: A Case Study of List Ranking. IPDPS David A. Bader, Virat Agarwal, Kamesh Madduri
2007	J	`jnl`	On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures. J. Parallel Distributed Comput. Diana H. P. Low, Bharadwaj Veeravalli, David A. Bader
2007	A	`conf`	Petascale Computing for Large-Scale Graph Problems. IPDPS David A. Bader
2007	Misc	`conf`	Petascale Computing for Large-Scale Graph Problems. PPAM David A. Bader
2007	A	`conf`	SWARM: A Parallel Programming Framework for Multicore Processors. IPDPS David A. Bader, Varun Kanade, Kamesh Madduri
2007	A	`conf`	Symposium Evening Tutorial: High-performance Computing Methods for Computational Genomics. IPDPS Srinivas Aluru, David A. Bader, Anantharaman Kalyanaraman
2007	C	`conf`	Techniques for Designing Efficient Parallel Graph Algorithms for SMPs and Multicore Processors. ISPA Guojing Cong, David A. Bader
2006	J	`jnl`	Computational Grand Challenges in Assembling the Tree of Life: Problems and Solutions. Adv. Comput. David A. Bader, Usman Roshan, Alexandros Stamatakis
2006	B	`conf`	Designing Multithreaded Algorithms for Breadth-First Search and st-connectivity on the Cray MTA-2. ICPP David A. Bader, Kamesh Madduri
2006	J	`jnl`	Designing irregular parallel algorithms with mutual exclusion and lock-free protocols. J. Parallel Distributed Comput. Guojing Cong, David A. Bader
2006	J	`jnl`	Editorial: Special Section on High-Performance Computational Biology. IEEE Trans. Parallel Distributed Syst. Srinivas Aluru, Nancy M. Amato, David A. Bader
2006	B	`conf`	ExactMP: An Efficient Parallel Exact Solver for Phylogenetic Tree Reconstruction Using Maximum Parsimony. ICPP David A. Bader, Vaddadi P. Chandu, Mi Yan
2006	J	`jnl`	Fast shared-memory algorithms for computing the minimum spanning forest of sparse graphs. J. Parallel Distributed Comput. David A. Bader, Guojing Cong
2006	A	`conf`	M11 - High-performance computing methods for computational genomics. SC Srinivas Aluru, David A. Bader, Anantharaman Kalyanaraman
2006	B	`conf`	Parallel Algorithms for Evaluating Centrality Indices in Real-world Networks. ICPP David A. Bader, Kamesh Madduri
2006	—	`ch.`	Parallel Computational Biology. Parallel Processing for Scientific Computing Srinivas Aluru, Nancy M. Amato, David A. Bader, Suchindra Bhandarkar, Laxmikant V. Kalé, Dan C. Marinescu
2006	—	`conf`	Parallel Shortest Path Algorithms for Solving Large-Scale Instances. The Shortest Path Problem Kamesh Madduri, David A. Bader, Jonathan W. Berry, Joseph R. Crobak
2006	A	`conf`	Performance analysis of parallel programs via message-passing graph traversal. IPDPS Matthew J. Sottile, Vaddadi P. Chandu, David A. Bader
2005	—	`conf`	A Cache-Aware Parallel Implementation of the Push-Relabel Network Flow Algorithm and Experimental Evaluation of the Gap Relabeling Heuristic. PDCS David A. Bader, Vipin Sachdeva
2005	J	`jnl`	A fast, parallel spanning tree algorithm for symmetric multiprocessors (SMPs). J. Parallel Distributed Comput. David A. Bader, Guojing Cong
2005	—	`conf`	An Empirical Analysis of Parallel Random Permutation Algorithms ON SMPs. PDCS Guojing Cong, David A. Bader
2005	A	`conf`	An Experimental Study of Parallel Biconnected Components Algorithms on Symmetric Multiprocessors (SMPs). IPDPS Guojing Cong, David A. Bader
2005	Misc	`conf`	Design and Implementation of the HPCS Graph Analysis Benchmark on Symmetric Multiprocessors. HiPC David A. Bader, Kamesh Madduri
2005	Misc	`ed.`	High Performance Computing - HiPC 2005, 12th International Conference, Goa, India, December 18-21, 2005, Proceedings HiPC David A. Bader, Manish Parashar, Sridhar Varadarajan, Viktor K. Prasanna
2005	—	`conf`	High-Performance Algorithm Engineering for Large-Scale Graph Problems and Computational Biology. WEA David A. Bader
2005	—	`conf`	Incorporating life sciences applications in the architectural optimizations of next-generation petaflop-system. CSB Workshops David A. Bader, Vipin Sachdeva
2005	B	`conf`	On the Architectural Requirements for Efficient Execution of Graph Algorithms. ICPP David A. Bader, Guojing Cong, John Feo
2004	A	`conf`	A Fast, Parallel Spanning Tree Algorithm for Symmetric Multiprocessors. IPDPS David A. Bader, Guojing Cong
2004	J	`jnl`	A Framework for Measuring Supercomputer Productivity. Int. J. High Perform. Comput. Appl. Marc Snir, David A. Bader
2004	B	`conf`	A Novel FDTD Application Featuring OpenMP-MPI Hybrid Parallelization. ICPP Mehmet F. Su, Ihab El-Kady, David A. Bader, Shawn-Yu Lin
2004	Misc	`conf`	A Parallel State Assignment Algorithm for Finite State Machines. HiPC David A. Bader, Kamesh Madduri
2004	J	`jnl`	An improved, randomized algorithm for parallel selection with an experimental study. J. Parallel Distributed Comput. David A. Bader
2004	J	`jnl`	Computational biology and high-performance computing. Commun. ACM David A. Bader
2004	A	`conf`	Fast Shared-Memory Algorithms for Computing the Minimum Spanning Forest of Sparse Graphs. IPDPS David A. Bader, Guojing Cong
2004	Misc	`conf`	Lock-Free Parallel Algorithms: An Experimental Study. HiPC Guojing Cong, David A. Bader
2004	—	`ed.`	Proceedings of the ISCA 17th International Conference on Parallel and Distributed Computing Systems, September 15-17, 2004, The Canterbury Hotel, San Francisco, California, USA PDCS David A. Bader, Ashfaq A. Khokhar
2004	J	`jnl`	Special Issue: High Performance Computational Biology. Concurr. Pract. Exp. David A. Bader, Srinivas Aluru
2004	B	`conf`	The Euler Tour Technique and Parallel Rooted Spanning Tree. ICPP Guojing Cong, David A. Bader
2004	—	`conf`	Topic 17: High Performance Bioinformatics. Euro-Par Mohammed Javeed Zaki, David A. Bader, Johan Montagnat, Concettina Guerra
2003	J	`jnl`	Guest Editor's Introduction: Special issue on high-performance computational biology. J. Parallel Distributed Comput. Srinivas Aluru, David A. Bader
2002	Misc	`conf`	Evaluating Arithmetic Expressions Using Tree Contraction: A Fast and Scalable Parallel Implementation for Symmetric Multiprocessors (SMPs) (Extended Abstract). HiPC David A. Bader, Sukanya Sreshta, Nina R. Weisse-Bernstein
2002	J	`jnl`	High-Performance Algorithm Engineering for Computational Phylogenetics. J. Supercomput. Bernard M. E. Moret, David A. Bader, Tandy J. Warnow
2002	A	`conf`	Workshop Introduction. IPDPS David A. Bader, Srinivas Aluru
2001	B	`conf`	A Linear-Time Algorithm for Computing Inversion Distance between Signed Permutations with an Experimental Study. WADS David A. Bader, Bernard M. E. Moret, Mi Yan
2001	J	`jnl`	A Linear-Time Algorithm for Computing Inversion Distance between Signed Permutations with an Experimental Study. J. Comput. Biol. David A. Bader, Bernard M. E. Moret, Mi Yan
2001	Misc	`conf`	A New Implmentation and Detailed Study of Breakpoint Analysis. Pacific Symposium on Biocomputing Bernard M. E. Moret, Stacia K. Wyman, David A. Bader, Tandy J. Warnow, Mi Yan
2001	J	`jnl`	Applications. Int. J. High Perform. Comput. Appl. David A. Bader, Rob Pennington
2001	Misc	`conf`	High-Performance Algorithm Engineering for Computational Phylogenetics. International Conference on Computational Science (2) Bernard M. E. Moret, David A. Bader, Tandy J. Warnow
2001	—	`conf`	Using PRAM Algorithms on a Uniform-Memory-Access Shared-Memory Architecture. WAE David A. Bader, Ajith K. Illendula, Bernard M. E. Moret, Nina R. Weisse-Bernstein
2000	—	`conf`	Algorithm Engineering for Parallel Computation. Experimental Algorithmics David A. Bader, Bernard M. E. Moret, Peter Sanders
2000	C	`conf`	Tutorial A: Design and Analysis of High Performance Clusters. CLUSTER Rob Pennington, David A. Bader, Barney Maccabe, Patricia A. Kovatch, Stephen L. Scott
1999	J	`jnl`	A New, Architectural Paradigm for High-performance Computing. Parallel Distributed Comput. Pract. David A. Bader
1999	—	`conf`	Design and Analysis of the Alliance/University of New Mexico Roadrunner Linux SMP SuperCluster. IWCC David A. Bader, Arthur B. Maccabe, Jason R. Mastaler, John K. McIver III, Patricia A. Kovatch
1999	J	`jnl`	SIMPLE: A Methodology for Programming High Performance Algorithms on Clusters of Symmetric Multiprocessors (SMPs). J. Parallel Distributed Comput. David A. Bader, Joseph F. JáJá
1998	J	`jnl`	A New Deterministic Parallel Sorting Algorithm with an Experimental Evaluation. ACM J. Exp. Algorithmics David R. Helman, Joseph F. JáJá, David A. Bader
1998	J	`jnl`	A Randomized Parallel Sorting Algorithm with an Experimental Study. J. Parallel Distributed Comput. David R. Helman, David A. Bader, Joseph F. JáJá
1996	—	`conf`	Parallel Algorithms for Image Enhancement and Segmentation by Region Growing with an Experimental Study. IPPS David A. Bader, Joseph F. JáJá, David Harwood, Larry S. Davis
1996	J	`jnl`	Parallel Algorithms for Image Histogramming and Connected Components with an Experimental Study. J. Parallel Distributed Comput. David A. Bader, Joseph F. JáJá
1996	B	`conf`	Parallel Algorithms for Personalized Communication and Sorting with an Experimental Study (Extended Abstract). SPAA David R. Helman, David A. Bader, Joseph F. JáJá
1996	J	`jnl`	Parallel algorithms for image enhancement and segmentation by region growing, with an experimental study. J. Supercomput. David A. Bader, Joseph F. JáJá, David Harwood, Larry S. Davis
1996	—	`conf`	Practical Parallel Algorithms for Dynamic Data Redistribution, Median Finding, and Selection. IPPS David A. Bader, Joseph F. JáJá
1996	J	`jnl`	Practical Parallel Algorithms for Personalized Communication and Integer Sorting. ACM J. Exp. Algorithmics David A. Bader, David R. Helman, Joseph F. JáJá
1995	B	`conf`	Parallel Algorithms for Image Histogramming and Connected Components with an Experimental Study (Extended Abstract). PPoPP David A. Bader, Joseph F. JáJá
1995	J	`jnl`	Scalable data parallel algorithms for texture synthesis using Gibbs random fields. IEEE Trans. Image Process. David A. Bader, Joseph F. JáJá, Rama Chellappa