Darren Treanor

38 papers B 1Misc 1Journal 21Unranked 15

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Liver-Quant: Feature-based image analysis toolkit for automatic quantification of metabolic dysfunction-associated steatotic liver disease. Comput. Biol. Medicine Mohsen Farzi, Clare McGenity, Alyn Cratchley, Leo Leplat, Peter Bankhead, Alexander I. Wright, Darren Treanor
2025	J	`jnl`	Machine learning-based multimodal prognostic models integrating pathology images and high-throughput omic data for overall survival prediction in cancer: a systematic review. CoRR Charlotte Jennings, Andrew Broad, Lucy Godson, Emily L. Clarke, David R. Westhead, Darren Treanor
2024	J	`jnl`	Artificial intelligence in digital pathology: a systematic review and meta-analysis of diagnostic test accuracy. npj Digit. Medicine Clare McGenity, Emily L. Clarke, Charlotte Jennings, Gillian Matthews, Caroline Cartlidge, Henschel Freduah-Agyemang, Deborah D. Stocken, Darren Treanor
2024	J	`jnl`	Immune subtyping of melanoma whole slide images using multiple instance learning. Medical Image Anal. Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya, Derek R. Magee
2024	J	`jnl`	Public evidence on AI products for digital pathology. npj Digit. Medicine Gillian Matthews, Clare McGenity, Daljeet Bansal, Darren Treanor
2023	J	`jnl`	Artificial intelligence in digital pathology: a diagnostic test accuracy systematic review and meta-analysis. CoRR Clare McGenity, Emily L. Clarke, Charlotte Jennings, Gillian Matthews, Caroline Cartlidge, Henschel Freduah-Agyemang, Deborah D. Stocken, Darren Treanor
2023	—	`conf`	Digital pathology whole slide image compression with vector quantized variational autoencoders. Digital and Computational Pathology Jason Keighley, Marc de Kamps, Alexander I. Wright, Darren Treanor
2023	J	`jnl`	How, for whom, and in what contexts will artificial intelligence be adopted in pathology? A realist interview study. J. Am. Medical Informatics Assoc. Henry King, Bethany Williams, Darren Treanor, Rebecca Randell
2023	—	`conf`	Multi-level Graph Representations of Melanoma Whole Slide Images for Identifying Immune Subgroups. GRAIL/OCELOT@MICCAI Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Derek R. Magee
2023	J	`jnl`	Navigating the reporting guideline environment for computational pathology: A review. CoRR Clare McGenity, Darren Treanor
2023	J	`jnl`	Pathologists light level preferences using the microscope - a study to guide digital pathology display use. CoRR Charlotte Jennings, Darren Treanor, David S. Brettle
2022	—	`conf`	Weakly-supervised learning for image-based classification of primary melanomas into genomic immune subgroups. MIDL Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya
2022	J	`jnl`	Weakly-supervised learning for image-based classification of primary melanomas into genomic immune subgroups. CoRR Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya
2021	J	`jnl`	Proactive Construction of an Annotated Imaging Database for Artificial Intelligence Training. J. Digit. Imaging Caroline Bivik Stadler, Martin Lindvall, Claes Lundström, Anna Bodén, Karin Lindman, Jeronimo Rose, Darren Treanor, Johan Blomma, Karin Stacke, Nicolas Pinchaud, Martin Hedlund, Filip Landgren, Mischa Woisetschläger, Daniel Forsberg
2019	J	`jnl`	Interactive Visualization of 3D Histopathology in Native Resolution. IEEE Trans. Vis. Comput. Graph. Martin Falk, Anders Ynnerman, Darren Treanor, Claes Lundström
2017	B	`conf`	Transfer Function design toolbox for full-color volume datasets. PacificVis Martin Falk, Ingrid Hotz, Patric Ljung, Darren Treanor, Anders Ynnerman, Claes Lundström
2016	J	`jnl`	A framework for 3D vessel analysis using whole slide images of liver tissue sections. Int. J. Comput. Biol. Drug Des. Yanhui Liang, Fusheng Wang, Darren Treanor, Derek R. Magee, Nick Roberts, George Teodoro, Yangyang Zhu, Jun Kong
2016	—	`conf`	Incorporating Local and Global Context for Better Automated Analysis of Colorectal Cancer on Digital Pathology Slides. MIUA Alexander I. Wright, Derek R. Magee, Philip Quirke, Darren Treanor
2016	J	`jnl`	Scale Stain: Multi-Resolution Feature Enhancement in Pathology Visualization. CoRR Jesper Molin, Anna Bodén, Darren Treanor, Morten Fjeld, Claes Lundström
2016	J	`jnl`	The Design and Evaluation of Interfaces for Navigating Gigapixel Images in Digital Pathology. ACM Trans. Comput. Hum. Interact. Roy A. Ruddle, Rhys G. Thomas, Rebecca Randell, Philip Quirke, Darren Treanor
2016	Misc	`conf`	Understanding Design for Automated Image Analysis in Digital Pathology. NordiCHI Jesper Molin, Pawel W. Wozniak, Claes Lundström, Darren Treanor, Morten Fjeld
2015	—	`conf`	A 3D Primary Vessel Reconstruction Framework with Serial Microscopy Images. MICCAI (3) Yanhui Liang, Fusheng Wang, Darren Treanor, Derek R. Magee, George Teodoro, Yangyang Zhu, Jun Kong
2015	—	`conf`	A Novel Approach for the Colour Deconvolution of Multiple Histological Stains. MIUA Duane Carey, Nagitha Wijayathunga, Andrew J. Bulpitt, Darren Treanor
2015	—	`conf`	Barriers and facilitators to the introduction of digital pathology for diagnostic work. MedInfo Rebecca Randell, Roy A. Ruddle, Darren Treanor
2015	J	`jnl`	Consistency and Standardization of Color in Medical Imaging: a Consensus Report. J. Digit. Imaging Aldo Badano, Craig Revie, Andrew Casertano, Wei-Chung Cheng, Phil J. Green, Tom Kimpe, Elizabeth A. Krupinski, Christye Sisson, Stein Olav Skrøvseth, Darren Treanor, Paul A. Boynton, David A. Clunie, Michael J. Flynn, Tatsuo Heki, Stephen M. Hewitt, Hiroyuki Homma, Andy Masia, Takashi Matsui, Balázs Nagy, Masahiro Nishibori, John Penczek, Thomas R. Schopf, Yukako Yagi, Hideto Yokoi
2015	J	`jnl`	Effect of Display Resolution on Time to Diagnosis with Virtual Pathology Slides in a Systematic Search Task. J. Digit. Imaging Rebecca Randell, Thilina Ambepitiya, Claudia Mello-Thoms, Roy A. Ruddle, David S. Brettle, Rhys G. Thomas, Darren Treanor
2015	—	`conf`	Liver whole slide image analysis for 3D vessel reconstruction. ISBI Yanhui Liang, Fusheng Wang, Darren Treanor, Derek R. Magee, George Teodoro, Yangyang Zhu, Jun Kong
2015	J	`jnl`	Performance and interaction behaviour during visual search on large, high-resolution displays. Inf. Vis. Roy A. Ruddle, Rhys G. Thomas, Rebecca S. Randell, Phil Quirke, Darren Treanor
2014	J	`jnl`	A Nonlinear Mapping Approach to Stain Normalization in Digital Histopathology Images Using Image-Specific Color Deconvolution. IEEE Trans. Biomed. Eng. Adnan Mujahid Khan, Nasir M. Rajpoot, Darren Treanor, Derek R. Magee
2014	—	`conf`	A framework for quantification of regional cardiac fibrosis from serial sections using 3D whole slide imaging. EMBC Stephen H. Gilbert, Olivier Bernus, Ed White, Nick Roberts, Darren Treanor, Derek R. Magee
2014	J	`jnl`	Unsupervised Content Classification Based Nonrigid Registration of Differently Stained Histology Images. IEEE Trans. Biomed. Eng. Yi Song, Darren Treanor, Andrew J. Bulpitt, Nagitha Wijayathunga, Nick Roberts, Ruth Wilcox, Derek R. Magee
2013	—	`conf`	Leveraging wall-sized high-resolution displays for comparative genomics analyses of copy number variation. BioVis Roy A. Ruddle, Waleed Fateen, Darren Treanor, Peter Sondergeld, Phil Quirke
2012	J	`jnl`	Diagnosis at the microscope: a workplace study of histopathology. Cogn. Technol. Work. Rebecca Randell, Roy A. Ruddle, Rhys Thomas, Darren Treanor
2012	—	`conf`	Using a high-resolution wall-sized virtual microscope to teach undergraduate medical students. CHI Extended Abstracts Rebecca Randell, Gordon G. A. Hutchins, John Sandars, Thilina Ambepitiya, Darren Treanor, Rhys Thomas, Roy A. Ruddle
2012	—	`conf`	Visual Parameter Optimization for Biomedical Image Analysis: A Case Study. SIGRAD A. Johannes Pretorius, Derek R. Magee, Darren Treanor, Roy A. Ruddle
2011	—	`conf`	Context Aware Colour Classification in Digital Microscopy. MIUA Derek R. Magee, Darren Treanor, Phattthanaphong Chomphuwiset, Philip Quirke
2011	—	`conf`	Context-Based Classification of Cell Nuclei and Tissue Regions in Liver Histopathology. MIUA Phattthanaphong Chomphuwiset, Derek R. Magee, Roger D. Boyle, Darren Treanor
2011	—	`conf`	Texture Analysis of Virtual Slides for Grading Dysplasia in Barretts Oesophagus. MIUA Afzan Adam, Andrew J. Bulpitt, Darren Treanor