Dario Greco

30 papers B 3Journal 26Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
MUUMI: an R package for statistical and network-based meta-analysis for multi-omics data integration.
BMC Bioinform.
Simo Iisakki Inkala, Michele Fratello, Giusy del Giudice, Giorgia Migliaccio, Angela Serra, Dario Greco, Antonio Federico
2025 J jnl
OpTiles: an R package for adaptive tiling and methylation variability profiling.
Bioinform.
Giorgia Migliaccio, Lena Möbus, Giusy del Giudice, Jack Morikka, Antonio Federico, Angela Serra, Dario Greco
2023 J jnl
DREAM: an R package for druggability evaluation of human complex diseases.
Bioinform.
Antonio Federico, Michele Fratello, Alisa Pavel, Lena Möbus, Giusy del Giudice, Angela Serra, Dario Greco
2023 J jnl
ESPERANTO: a GLP-field sEmi-SuPERvised toxicogenomics metadAta curatioN TOol.
Bioinform.
Emanuele Di Lieto, Angela Serra, Simo Iisakki Inkala, Laura Aliisa Saarimäki, Giusy del Giudice, Michele Fratello, Veera Hautanen, Maria Annala, Antonio Federico, Dario Greco
2023 J jnl
KNeMAP: a network mapping approach for knowledge-driven comparison of transcriptomic profiles.
Bioinform.
Alisa Pavel, Giusy del Giudice, Michele Fratello, Leo Ghemtio, Antonio Di Lieto, Jari Yli-Kauhaluoma, Henri Xhaard, Antonio Federico, Angela Serra, Dario Greco
2022 J jnl
Computationally prioritized drugs inhibit SARS-CoV-2 infection and syncytia formation.
Briefings Bioinform.
Angela Serra, Michele Fratello, Antonio Federico, Ravi Ojha, Riccardo Provenzani, Ervin Tasnádi, Luca Cattelani, Giusy del Giudice, Pia Anneli Sofia Kinaret, Laura Aliisa Saarimäki, Alisa Pavel, Suvi Kuivanen, Vincenzo Cerullo, Olli Vapalahti, Peter Horváth, Antonio Di Lieto, Jari Yli-Kauhaluoma, Giuseppe Balistreri, Dario Greco
2021 J jnl
A systematic comparison of data- and knowledge-driven approaches to disease subtype discovery.
Briefings Bioinform.
Teemu J. Rintala, Antonio Federico, Leena Latonen, Dario Greco, Vittorio Fortino
2021 J jnl
Clustering based approach for population level identification of condition-associated T-cell receptor β-chain CDR3 sequences.
BMC Bioinform.
Dawit A. Yohannes, Katri Kaukinen, Kalle Kurppa, Päivi Saavalainen, Dario Greco
2021 J jnl
CpGmotifs: a tool to discover DNA motifs associated to CpG methylation events.
BMC Bioinform.
Giovanni Scala, Antonio Federico, Dario Greco
2021 J jnl
Integrated network analysis reveals new genes suggesting COVID-19 chronic effects and treatment.
Briefings Bioinform.
Alisa Pavel, Giusy del Giudice, Antonio Federico, Antonio Di Lieto, Pia Anneli Sofia Kinaret, Angela Serra, Dario Greco
2021 J jnl
VOLTA: adVanced mOLecular neTwork Analysis.
Bioinform.
Alisa Pavel, Antonio Federico, Giusy del Giudice, Angela Serra, Dario Greco
2020 J jnl
BMDx: a graphical Shiny application to perform Benchmark Dose analysis for transcriptomics data.
Bioinform.
Angela Serra, Laura Aliisa Saarimäki, Michele Fratello, Veer Singh Marwah, Dario Greco
2020 J jnl
Feature set optimization in biomarker discovery from genome-scale data.
Bioinform.
Vittorio Fortino, Giovanni Scala, Dario Greco
2020 J jnl
MaNGA: a novel multi-niche multi-objective genetic algorithm for QSAR modelling.
Bioinform.
Angela Serra, Serli Önlü, Paola Festa, Vittorio Fortino, Dario Greco
2019 J jnl
An integrated quantitative structure and mechanism of action-activity relationship model of human serum albumin binding.
J. Cheminformatics
Angela Serra, Serli Önlü, Pietro Coretto, Dario Greco
2019 J jnl
FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments.
BMC Bioinform.
Giovanni Scala, Angela Serra, Veer Singh Marwah, Laura Aliisa Saarimäki, Dario Greco
2019 J jnl
eUTOPIA: solUTion for Omics data PreprocessIng and Analysis.
Source Code Biol. Medicine
Veer Singh Marwah, Giovanni Scala, Pia Anneli Sofia Kinaret, Angela Serra, Harri Alenius, Vittorio Fortino, Dario Greco
2018 J jnl
INfORM: Inference of NetwOrk Response Modules.
Bioinform.
Veer Singh Marwah, Pia Anneli Sofia Kinaret, Angela Serra, Giovanni Scala, Antti Lauerma, Vittorio Fortino, Dario Greco
2018 J jnl
IntEREst: intron-exon retention estimator.
BMC Bioinform.
Ali Oghabian, Dario Greco, Mikko J. Frilander
2016 J jnl
CONDOP: an R package for CONdition-Dependent Operon Predictions.
Bioinform.
Vittorio Fortino, Roberto Tagliaferri, Dario Greco
2016 B conf
Data integration in genomics and systems biology.
CEC
Angela Serra, Michele Fratello, Dario Greco, Roberto Tagliaferri
2016 — conf
Effectiveness of projection techniques in genomic data analysis.
RTSI
Paola Galdi, Angela Serra, Dario Greco, Roberto Tagliaferri
2016 B conf
Time aware knowledge extraction to analyze nanosafety cluster scientific activities.
CEC
Carmen De Maio, Mimmo Parente, Giuseppe Fenza, Dario Greco
2015 J jnl
A multi-view genomic data simulator.
BMC Bioinform.
Michele Fratello, Angela Serra, Vittorio Fortino, Giancarlo Raiconi, Roberto Tagliaferri, Dario Greco
2015 J jnl
BACA: bubble chArt to compare annotations.
BMC Bioinform.
Vittorio Fortino, Harri Alenius, Dario Greco
2015 B conf
Impact of different metrics on multi-view clustering.
IJCNN
Angela Serra, Dario Greco, Roberto Tagliaferri
2015 J jnl
MVDA: a multi-view genomic data integration methodology.
BMC Bioinform.
Angela Serra, Michele Fratello, Vittorio Fortino, Giancarlo Raiconi, Roberto Tagliaferri, Dario Greco
2014 J jnl
Transcriptome dynamics-based operon prediction in prokaryotes.
BMC Bioinform.
Vittorio Fortino, Olli-Pekka Smolander, Petri Auvinen, Roberto Tagliaferri, Dario Greco
2013 J jnl
Drug Repositioning: A Machine-Learning Approach through Data Integration.
J. Cheminformatics
Francesco Napolitano, Yan Zhao, Vania M. Moreira, Roberto Tagliaferri, Juha Kere, Mauro D'Amato, Dario Greco
2010 J jnl
Bayesian integrated modeling of expression data: a case study on RhoG.
BMC Bioinform.
Rashi Gupta, Dario Greco, Petri Auvinen, Elja Arjas