Danielle L. Mowery

63 papers Misc 19Journal 18Unranked 26

Year	Rank	Type	Title / Venue / Authors
2023	J	`jnl`	A voice-based digital assistant for intelligent prompting of evidence-based practices during ICU rounds. J. Biomed. Informatics Andrew J. King, Derek C. Angus, Gregory F. Cooper, Danielle L. Mowery, Jennifer B. Seaman, Kelly M. Potter, Leigh A. Bukowski, Ali Al-Khafaji, Scott R. Gunn, Jeremy M. Kahn
2023	J	`jnl`	Informative missingness: What can we learn from patterns in missing laboratory data in the electronic health record? J. Biomed. Informatics Amelia L. M. Tan, Emily J. Getzen, Meghan R. Hutch, Zachary H. Strasser, Alba Gutiérrez-Sacristán, Trang T. Le, Arianna Dagliati, Michele Morris, David A. Hanauer, Bertrand Moal, Clara-Lea Bonzel, William Yuan, Lorenzo Chiudinelli, Priyam Das, Harrison G. Zhang, Bruce J. Aronow, Paul Avillach, Gabriel A. Brat, Tianxi Cai, Chuan Hong, William G. La Cava, He Hooi Will Loh, Yuan Luo, Shawn N. Murphy, Kee Yuan Hgiam, Gilbert S. Omenn, Lav P. Patel, Malarkodi J. Samayamuthu, Emily R. Shriver, Zahra Shakeri Hossein Abad, Byorn W. L. Tan, Shyam Visweswaran, Xuan Wang, Griffin M. Weber, Zongqi Xia, Bertrand Verdy, Qi Long, Danielle L. Mowery, John H. Holmes
2023	J	`jnl`	Mining for equitable health: Assessing the impact of missing data in electronic health records. J. Biomed. Informatics Emily J. Getzen, Lyle H. Ungar, Danielle L. Mowery, Xiaoqian Jiang, Qi Long
2023	—	`conf`	Relation Detection to Identify Stroke Assertions from Clinical Notes Using Natural Language Processing. MedInfo Audrey Yang, Sam Kamien, Anahita Davoudi, Sy Hwang, Meet Gandhi, Ryan J. Urbanowicz, Danielle L. Mowery
2023	J	`jnl`	STREAMLINE: An Automated Machine Learning Pipeline for Biomedicine Applied to Examine the Utility of Photography-Based Phenotypes for OSA Prediction Across International Sleep Centers. CoRR Ryan J. Urbanowicz, Harsh Bandhey, Brendan T. Keenan, Greg Maislin, Sy Hwang, Danielle L. Mowery, Shannon M. Lynch, Diego R. Mazzotti, Fang Han, Qing Yun Li, Thomas Penzel, Sergio Tufik, Lia Bittencourt, Thorarinn Gislason, Philip de Chazal, Bhajan Singh, Nigel McArdle, Ning-Hung Chen, Allan Pack, Richard J. Schwab, Peter A. Cistulli, Ulysses J. Magalang
2023	—	`conf`	Using Natural Language Processing to Extract and Classify Symptoms Among Patients with Thyroid Dysfunction. MedInfo Sy Hwang, Sujatha Reddy, Katherine Wainwright, Emily Schriver, Anne Cappola, Danielle L. Mowery
2022	Misc	`conf`	Identifying Barriers to Post-Acute Care Referral and Characterizing Negative Patient Preferences Among Hospitalized Older Adults Using Natural Language Processing. AMIA Erin E. Kennedy, Anahita Davoudi, Sy Hwang, Ryan J. Urbanowicz, Philip J. Freda, Kathryn H. Bowles, Danielle L. Mowery
2022	J	`jnl`	SurvMaximin: Robust federated approach to transporting survival risk prediction models. J. Biomed. Informatics Xuan Wang, Harrison G. Zhang, Xin Xiong, Chuan Hong, Griffin M. Weber, Gabriel A. Brat, Clara-Lea Bonzel, Yuan Luo, Rui Duan, Nathan P. Palmer, Meghan R. Hutch, Alba Gutiérrez-Sacristán, Riccardo Bellazzi, Luca Chiovato, Kelly Cho, Arianna Dagliati, Hossein Estiri, Noelia García-Barrio, Romain Griffier, David A. Hanauer, Yuk-Lam Ho, John H. Holmes, Mark S. Keller, Jeffrey G. Klann, Sehi L'Yi, Sara Lozano-Zahonero, Sarah E. Maidlow, Adeline Makoudjou, Alberto Malovini, Bertrand Moal, Jason H. Moore, Michele Morris, Danielle L. Mowery, Shawn N. Murphy, Antoine Neuraz, Kee Yuan Ngiam, Gilbert S. Omenn, Lav P. Patel, Miguel Pedrera-Jiménez, Andrea Prunotto, Malarkodi J. Samayamuthu, Fernando J. Sanz Vidorreta, Emily Schriver, Petra Schubert, Pablo Serrano-Balazote, Andrew M. South, Amelia L. M. Tan, Byorn W. L. Tan, Valentina Tibollo, Patric Tippmann, Shyam Visweswaran, Zongqi Xia, William Yuan, Daniela Zöller, Isaac S. Kohane, Paul Avillach, Zijian Guo, Tianxi Cai
2021	J	`jnl`	Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data. J. Am. Medical Informatics Assoc. Jeffrey G. Klann, Hossein Estiri, Griffin M. Weber, Bertrand Moal, Paul Avillach, Chuan Hong, Amelia L. M. Tan, Brett K. Beaulieu-Jones, Victor M. Castro, Thomas Maulhardt, Alon Geva, Alberto Malovini, Andrew M. South, Shyam Visweswaran, Michele Morris, Malarkodi J. Samayamuthu, Gilbert S. Omenn, Kee Yuan Ngiam, Kenneth D. Mandl, Martin Boeker, Karen L. Olson, Danielle L. Mowery, Robert W. Follett, David A. Hanauer, Riccardo Bellazzi, Jason H. Moore, Ne-Hooi Will Loh, Douglas S. Bell, Kavishwar B. Wagholikar, Luca Chiovato, Valentina Tibollo, Siegbert Rieg, Anthony L. L. J. Li, Vianney Jouhet, Emily Schriver, Zongqi Xia, Meghan Hutch, Yuan Luo, Isaac S. Kohane, Gabriel A. Brat, Shawn N. Murphy
2020	Misc	`conf`	A Preliminary Characterization of Canonicalized and Non-Canonicalized Section Headers Across Variable Clinical Note Types. AMIA Junjie Wang, Shun Yu, Anahita Davoudi, Danielle L. Mowery
2020	J	`jnl`	Annotation and extraction of age and temporally-related events from clinical histories. BMC Medical Informatics Decis. Mak. Judy Hong, Anahita Davoudi, Shun Yu, Danielle L. Mowery
2020	J	`jnl`	Ideas for how informaticians can get involved with COVID-19 research. BioData Min. Jason H. Moore, Ian Barnett, Mary Regina Boland, Yong Chen, George Demiris, Graciela Gonzalez-Hernandez, Daniel S. Herman, Blanca E. Himes, Rebecca A. Hubbard, Dokyoon Kim, Jeffrey S. Morris, Danielle L. Mowery, Marylyn D. Ritchie, Li Shen, Ryan J. Urbanowicz, John H. Holmes
2020	J	`jnl`	International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium. npj Digit. Medicine Gabriel A. Brat, Griffin M. Weber, Nils Gehlenborg, Paul Avillach, Nathan P. Palmer, Luca Chiovato, James J. Cimino, Lemuel R. Waitman, Gilbert S. Omenn, Alberto Malovini, Jason H. Moore, Brett K. Beaulieu-Jones, Valentina Tibollo, Shawn N. Murphy, Sehi L'Yi, Mark S. Keller, Riccardo Bellazzi, David A. Hanauer, Arnaud Serret-Larmande, Alba Gutiérrez-Sacristán, John J. Holmes, Douglas S. Bell, Kenneth D. Mandl, Robert W. Follett, Jeffrey G. Klann, Douglas A. Murad, Luigia Scudeller, Mauro Bucalo, Katie G. Kirchoff, Jean B. Craig, Jihad S. Obeid, Vianney Jouhet, Romain Griffier, Sébastien Cossin, Bertrand Moal, Lav P. Patel, Antonio Bellasi, Hans-Ulrich Prokosch, Detlef Kraska, Piotr Sliz, Amelia L. M. Tan, Kee Yuan Ngiam, Alberto Zambelli, Danielle L. Mowery, Emily Schriver, Batsal Devkota, Robert L. Bradford, Mohamad Daniar, Christel Daniel, Vincent Benoit, Romain Bey, Nicolas Paris, Patricia Serre, Nina Orlova, Julien Dubiel, Martin Hilka, Anne-Sophie Jannot, Stéphane Bréant, Judith Leblanc, Nicolas Griffon, Anita Burgun, Mélodie Bernaux, Arnaud Sandrin, Elisa Salamanca, Sylvie Cormont, Thomas Ganslandt, Tobias Gradinger, Julien Champ, Martin Boeker, Patricia Martel, Loic Estève, Alexandre Gramfort, Olivier Grisel, Damien Leprovost, Thomas Moreau, Gaël Varoquaux, Jill-Jênn Vie, Demian Wassermann, Arthur Mensch, Charlotte Caucheteux, Christian Haverkamp, Guillaume Lemaitre, Silvano Bosari, Ian D. Krantz, Andrew M. South, Tianxi Cai, Isaac S. Kohane
2019	—	`conf`	Carnival: A Graph-Based Data Integration and Query Tool to Support Patient Cohort Generation for Clinical Research. MedInfo David L. Birtwell, Heather Williams, Reed Pyeritz, Scott Damrauer, Danielle L. Mowery
2019	Misc	`conf`	Extracting Disease Onset from Family History Comments in the Electronic Health Record using Fast Healthcare Interoperability Resources. AMIA Jianlin Shi, Kensaku Kawamoto, Wendy Kohlmann, Danielle L. Mowery, Richard L. Bradshaw, Subhadeep Deep, Wendy W. Chapman, Guilherme Del Fiol
2019	J	`jnl`	Moonstone: a novel natural language processing system for inferring social risk from clinical narratives. J. Biomed. Semant. Mike Conway, Salomeh Keyhani, Lee M. Christensen, Brett R. South, Marzieh Vali, Louise C. Walter, Danielle L. Mowery, Samir E. AbdelRahman, Wendy W. Chapman
2018	Misc	`conf`	Assessing Information Congruence of Documented Cardiovascular Disease between Electronic Dental and Medical Records. AMIA Jay S. Patel, Danielle L. Mowery, Anand Krishnan, Thankam P. Thyvalikakath
2018	Misc	`conf`	Detecting Current Episodes of Cholecystitis-related Pain from Veterans Affairs Clinical Notes using Natural Language Processing. AMIA Danielle L. Mowery, Luke Martin, Brett R. South, Ellen Morrow, William Peche, Eric Wiesner, Wendy W. Chapman, Benjamin S. Brooke
2017	Misc	`conf`	A Comparison of Stroke Classifiers Leveraging Hospital Billing Codes versus Natural Language Processing. AMIA Danielle L. Mowery, Brent D. Hill, Mingyuan Zhang, Wendy W. Chapman, Lisa A. Cannon-Albright, Jennifer Majersik
2017	—	`conf`	A Corpus Analysis of Social Connections and Social Isolation in Adolescents Suffering from Depressive Disorders. CLPsych@ACL Jia-Wen Guo, Danielle L. Mowery, Djin Lai, Katherine A. Sward, Mike Conway
2017	—	`conf`	Automatic Extraction of Social Determinants of Health from Veterans Affairs Clinical Documents using Natural Language Processing. CRI Brett R. South, Lee M. Christensen, Danielle L. Mowery, Melissa Castine, Marzieh Vali, Marjorie Carter, Mike Conway, Adi V. Gundlapalli, Wendy W. Chapman, Salomeh Keyhani
2017	—	`conf`	Classifying Sentiment of Free-Text Comments in Patient Satisfaction Surveys. CRI Elizabeth Cary, Aaron M. Secrest, Chrissy Daniels, Wendy W. Chapman, Mike Conway, Danielle L. Mowery
2017	Misc	`conf`	Detecting Evidence of Intra-abdominal Surgical Site Infections from Radiology Reports Using Natural Language Processing. AMIA Alec B. Chapman, Danielle L. Mowery, Douglas S. Swords, Wendy W. Chapman, Brian T. Bucher
2017	—	`conf`	Developing and Assessing the Complexity of a Knowledge Base for Extracting Indications from Carotid Ultrasounds for the Veterans Health Administration. CRI Danielle L. Mowery, Melissa Castine, Erin Madden, Salomeh Keyhani, Wendy W. Chapman
2017	—	`conf`	Extracting Intrauterine Device Usage from Clinical Texts Using Natural Language Processing. ICHI Jianlin Shi, Danielle L. Mowery, Mingyuan Zhang, Jessica Sanders, Wendy W. Chapman, Lori Gawron
2017	J	`jnl`	Feature Studies to Inform the Classification of Depressive Symptoms from Twitter Data for Population Health. CoRR Danielle L. Mowery, Craig Bryan, Mike Conway
2017	—	`conf`	Investigating the Documentation of Electronic Cigarette Use in the Veteran Affairs Electronic Health Record: A Pilot Study. BioNLP Danielle L. Mowery, Brett R. South, Olga V. Patterson, Shu-Hong Zhu, Mike Conway
2017	—	`conf`	Towards Automatic Detection of Surgical Site Infections. CRI Brian T. Bucher, Danielle L. Mowery, Melissa Castine, Wendy W. Chapman
2016	Misc	`conf`	A Characterization of Emotional Valence to Support Review of Free-Text Press-Ganey Patient Satisfaction Survey Responses. AMIA Danielle L. Mowery, Kristina M. Doing-Harris, Wendy W. Chapman, Chrissy Daniels, Mike Conway
2016	Misc	`conf`	Annotating patient smoking status from electronic dental record histories. AMIA Jay S. Patel, Zasim Azhar Siddiqui, Danielle L. Mowery, Thankam P. Thyvalikakath
2016	—	`conf`	Assessing the Feasibility of an Automated Suggestion System for Communicating Critical Findings from Chest Radiology Reports to Referring Physicians. BioNLP@ACL Brian E. Chapman, Danielle L. Mowery, Evan Narasimhan, Neel Patel, Wendy W. Chapman, Marta E. Heilbrun
2016	J	`jnl`	Developing a web-based SKOS editor. J. Biomed. Semant. Mike Conway, Artem Khojoyan, Fariba Fana, William Scuba, Melissa Castine, Danielle L. Mowery, Wendy W. Chapman, Simon Jupp
2016	J	`jnl`	Extracting a stroke phenotype risk factor from Veteran Health Administration clinical reports: an information content analysis. J. Biomed. Semant. Danielle L. Mowery, Brian E. Chapman, Mike Conway, Brett R. South, Erin Madden, Salomeh Keyhani, Wendy W. Chapman
2016	J	`jnl`	Knowledge Author: facilitating user-driven, domain content development to support clinical information extraction. J. Biomed. Semant. William Scuba, Melissa Tharp, Danielle L. Mowery, Eugene Tseytlin, Yang Liu, Frank A. Drews, Wendy W. Chapman
2016	J	`jnl`	Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2. J. Biomed. Semant. Danielle L. Mowery, Brett R. South, Lee M. Christensen, Jianwei Leng, Laura-Maria Peltonen, Sanna Salanterä, Hanna Suominen, David Martínez, Sumithra Velupillai, Noémie Elhadad, Guergana Savova, Sameer Pradhan, Wendy W. Chapman
2016	Misc	`conf`	RuSH: a Rule-based Segmentation Tool Using Hashing for Extremely Accurate Sentence Segmentation of Clinical Text. AMIA Jianlin Shi, Danielle L. Mowery, Kristina M. Doing-Harris, John F. Hurdle
2016	—	`conf`	Towards Automatically Classifying Depressive Symptoms from Twitter Data for Population Health. PEOPLES@COLING Danielle L. Mowery, Albert Park, Craig Bryan, Mike Conway
2016	Misc	`conf`	Understanding patient satisfaction with received healthcare services: A natural language processing approach. AMIA Kristina Doing-Harris, Danielle L. Mowery, Chrissy Daniels, Wendy W. Chapman, Mike Conway
2016	—	`conf`	Vocabulary Development To Support Information Extraction of Substance Abuse from Psychiatry Notes. BioNLP@ACL Sumithra Velupillai, Danielle L. Mowery, Mike Conway, John F. Hurdle, Brent Kious
2015	Misc	`conf`	Annotating ADLs and IADLs in Veterans Affairs Clinical Documents. AMIA Brett R. South, Danielle L. Mowery, Lee M. Christensen, Adi V. Gundlapalli, Melissa Tharp, Marzieh Vali, Marjorie E. Carter, Mike Conway, Salomeh Keyhani, Wendy W. Chapman
2015	—	`conf`	BluLab: Temporal Information Extraction for the 2015 Clinical TempEval Challenge. SemEval@NAACL-HLT Sumithra Velupillai, Danielle L. Mowery, Samir E. AbdelRahman, Lee M. Christensen, Wendy W. Chapman
2015	—	`conf`	Towards Developing an Annotation Scheme for Depressive Disorder Symptoms: A Preliminary Study using Twitter Data. CLPsych@HLT-NAACL Danielle L. Mowery, Craig Bryan, Mike Conway
2015	Misc	`conf`	Towards a Generalizable Time Expression Model for Temporal Reasoning in Clinical Notes. AMIA Sumithra Velupillai, Danielle L. Mowery, Samir E. AbdelRahman, Lee M. Christensen, Wendy W. Chapman
2014	Misc	`conf`	A System Usability Study Assessing a Machine-Assisted Interactive Interface to Support Annotation of Protected Health Information in Clinical Texts. AMIA Brett R. South, Danielle L. Mowery, Chris Leng, Stéphane M. Meystre, Wendy W. Chapman
2014	J	`jnl`	Cue-based assertion classification for Swedish clinical text - Developing a lexicon for pyConTextSwe. Artif. Intell. Medicine Sumithra Velupillai, Maria Skeppstedt, Maria Kvist, Danielle L. Mowery, Brian E. Chapman, Hercules Dalianis, Wendy W. Chapman
2014	Misc	`conf`	Developing a Knowledge Base for Detecting Carotid Stenosis with pyConText. AMIA Danielle L. Mowery, Daniel Franc, Shazia Ashfaq, Eric Cheng, Tania Zamora, Wendy W. Chapman, Brian E. Chapman
2014	Misc	`conf`	Disease/Disorder Semantic Template Filling - Information Extraction Challenge in the ShARe/CLEF eHealth Evaluation Lab 2014. AMIA Sumithra Velupillai, Danielle L. Mowery, Lee M. Christensen, Noemie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman
2014	J	`jnl`	Evaluating the effects of machine pre-annotation and an interactive annotation interface on manual de-identification of clinical text. J. Biomed. Informatics Brett R. South, Danielle L. Mowery, Ying Suo, Jianwei Leng, Óscar Ferrández, Stéphane M. Meystre, Wendy W. Chapman
2014	—	`conf`	Generating Patient Problem Lists from the ShARe Corpus using SNOMED CT/SNOMED CT CORE Problem List. BioNLP@ACL Danielle L. Mowery, Mindy K. Ross, Sumithra Velupillai, Stéphane M. Meystre, Janyce Wiebe, Wendy W. Chapman
2014	—	`conf`	Overview of the ShARe/CLEF eHealth Evaluation Lab 2014. CLEF Liadh Kelly, Lorraine Goeuriot, Hanna Suominen, Tobias Schreck, Gondy Leroy, Danielle L. Mowery, Sumithra Velupillai, Wendy W. Chapman, David Martínez, Guido Zuccon, João R. M. Palotti
2014	—	`conf`	Task 1 of the CLEF eHealth Evaluation Lab 2014. CLEF (Working Notes) Hanna Suominen, Tobias Schreck, Gondy Leroy, Harry Hochheiser, Lorraine Goeuriot, Liadh Kelly, Danielle L. Mowery, Jaume Nualart, Gabriela Ferraro, Daniel A. Keim
2014	—	`conf`	Task 2: ShARe/CLEF eHealth Evaluation Lab 2014. CLEF (Working Notes) Danielle L. Mowery, Sumithra Velupillai, Brett R. South, Lee M. Christensen, David Martínez, Liadh Kelly, Lorraine Goeuriot, Noémie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman
2013	Misc	`conf`	Creating a Reference Standard of Acronym and Abbreviation Annotations for the ShARe/CLEF eHealth Challenge 2013. AMIA Danielle L. Mowery, Brett R. South, Jianwei Leng, Laura-Maria Murtola, Riitta Danielsson-Ojala, Sanna Salanterä, Wendy W. Chapman
2013	—	`conf`	Extending the NegEx Lexicon for Multiple Languages. MedInfo Wendy Webber Chapman, Dieter Hillert, Sumithra Velupillai, Maria Kvist, Maria Skeppstedt, Brian E. Chapman, Mike Conway, Melissa Tharp, Danielle L. Mowery, Louise Deléger
2013	—	`conf`	Overview of the ShARe/CLEF eHealth Evaluation Lab 2013. CLEF Hanna Suominen, Sanna Salanterä, Sumithra Velupillai, Wendy Webber Chapman, Guergana K. Savova, Noemie Elhadad, Sameer Pradhan, Brett R. South, Danielle L. Mowery, Gareth J. F. Jones, Johannes Leveling, Liadh Kelly, Lorraine Goeuriot, David Martínez, Guido Zuccon
2013	Misc	`conf`	Semantic Annotation of Clinical Events for Generating a Problem List. AMIA Danielle L. Mowery, Pamela W. Jordan, Janyce Wiebe, Henk Harkema, Wendy W. Chapman
2013	—	`conf`	Task 2: ShARe/CLEF eHealth Evaluation Lab 2013. CLEF (Working Notes) Danielle L. Mowery, Brett R. South, Lee M. Christensen, Laura-Maria Murtola, Sanna Salanterä, Hanna Suominen, David Martínez, Noémie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman
2012	J	`jnl`	Building an automated SOAP classifier for emergency department reports. J. Biomed. Informatics Danielle L. Mowery, Janyce Wiebe, Shyam Visweswaran, Henk Harkema, Wendy Webber Chapman
2012	—	`conf`	Does Domain Knowledge Matter for Assertion Annotation in Clinical Texts? HISB Danielle L. Mowery, Pamela W. Jordan, Janyce Wiebe, Wendy Webber Chapman, Lin Liu
2012	—	`conf`	Medical diagnosis lost in translation - Analysis of uncertainty and negation expressions in English and Swedish clinical texts. BioNLP@HLT-NAACL Danielle L. Mowery, Sumithra Velupillai, Wendy W. Chapman
2012	Misc	`conf`	On the Road Towards Developing a Publicly Available Corpus of De-identified Clinical Texts. AMIA Brett R. South, Danielle L. Mowery, Óscar Ferrández, Shuying Shen, Ying Suo, Mingyuan Zhang, Annie Chen, Liqin Wang, Stéphane M. Meystre, Wendy Webber Chapman
2009	—	`conf`	Distinguishing Historical from Current Problems in Clinical Reports - Which Textual Features Help? BioNLP@HLT-NAACL Danielle L. Mowery, Henk Harkema, John N. Dowling, Jonathan L. Lustgarten, Wendy W. Chapman
2008	—	`conf`	Temporal Annotation of Clinical Text. BioNLP Danielle L. Mowery, Henk Harkema, Wendy W. Chapman