Daniel R. Harris

30 papers Misc 8Journal 10Unranked 12

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Bridging the Clinical Expertise Gap: Development of a Web-Based Platform for Accessible Time Series Forecasting and Analysis. CoRR Aaron D. Mullen, Daniel R. Harris, Svetla Slavova, V. K. Cody Bumgardner
2025	J	`jnl`	Large Language Models for Drug Overdose Prediction from Longitudinal Medical Records. CoRR Md Sultan Al Nahian, Chris Delcher, Daniel R. Harris, Peter Akpunonu, Ramakanth Kavuluru
2024	J	`jnl`	Forecasting Opioid Incidents for Rapid Actionable Data for Opioid Response in Kentucky. CoRR Aaron D. Mullen, Daniel R. Harris, Peter Rock, Svetla Slavova, Jeffrey Talbert, V. K. Cody Bumgardner
2023	J	`jnl`	An open natural language processing (NLP) framework for EHR-based clinical research: a case demonstration using the National COVID Cohort Collaborative (N3C). J. Am. Medical Informatics Assoc. Sijia Liu, Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Robert T. Miller, Andrew E. Williams, Daniel R. Harris, Ramakanth Kavuluru, Mei Liu, Noor Abu-El-Rub, Dalton Schutte, Rui Zhang, Masoud Rouhizadeh, John D. Osborne, Yongqun He, Umit Topaloglu, Stephanie S. Hong, Joel H. Saltz, Thomas Schaffter, Emily R. Pfaff, Christopher G. Chute, Tim Duong, Melissa A. Haendel, Rafael Fuentes, Peter Szolovits, Hua Xu, Hongfang Liu
2022	Misc	`conf`	geoPIPE: Geospatial Pipeline for Enhancing Open Data for Substance Use Disorders Research. AMIA Daniel R. Harris, Nick Anthony, Mojde Mir, Chris Delcher
2021	J	`jnl`	An Open Natural Language Processing Development Framework for EHR-based Clinical Research: A case demonstration using the National COVID Cohort Collaborative (N3C). CoRR Sijia Liu, Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Robert T. Miller, Andrew E. Williams, Daniel R. Harris, Ramakanth Kavuluru, Mei Liu, Noor Abu-El-Rub, Rui Zhang, John D. Osborne, Masoud Rouhizadeh, Yongqun He, Emily R. Pfaff, Christopher G. Chute, Tim Duong, Melissa A. Haendel, Rafael Fuentes, Peter Szolovits, Hua Xu, Hongfang Liu
2021	—	`conf`	Extracting Semantics from Census-based Reference Data. ICSC Daniel R. Harris, Nima Seyedtalebi
2021	Misc	`conf`	Generalizing Dynamic Dashboards for Community-Engaged Interventions. AMIA Daniel R. Harris, Daniel Redmond, Jeffery C. Talbert
2021	Misc	`conf`	Integrating Medical and Dental Histories for Translational Science. AMIA Darren W. Henderson, Malini S. Kirakodu, James R. Aaron, Tamela J. Harper, Daniel R. Harris, Jeffery C. Talbert, Luciana M. Shaddox
2020	—	`conf`	Challenges and Barriers in Applying Natural Language Processing to Medical Examiner Notes from Fatal Opioid Poisoning Cases. IEEE BigData Daniel R. Harris, Christian Eisinger, Yanning Wang, Chris Delcher
2020	Misc	`conf`	Improving the Utility of Tobacco-Related Problem List Entries Using Natural Language Processing. AMIA Daniel R. Harris, Darren W. Henderson, Alexandria Corbeau
2020	—	`conf`	Leveraging Differential Privacy in Geospatial Analyses of Standardized Healthcare Data. IEEE BigData Daniel R. Harris
2019	—	`conf`	bench4gis: Benchmarking Privacy-aware Geocoding with Open Big Data. IEEE BigData Daniel R. Harris, Chris Delcher
2018	Misc	`conf`	Retrospective analysis of health claims to evaluate pharmacotherapies with potential for repurposing: Association of bupropion and stimulant use disorder remission. AMIA Emily R. Hankosky, Heather M. Bush, Linda P. Dwoskin, Daniel R. Harris, Darren W. Henderson, Guo-Qiang Zhang, Patricia R. Freeman, Jeffery C. Talbert
2017	J	`jnl`	Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017. BMC Bioinform. Eric C. Rouchka, Julia H. Chariker, David Tieri, Juw Won Park, Shreedharkumar D. Rajurkar, Vikas Singh, Nishchal K. Verma, Yan Cui, Mark L. Farman, Bradford Condon, Neil Moore, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Daniel R. Harris, Patrick Calie, Eun Kyong Shin, Robert L. Davis, Arash Shaban-Nejad, Joshua M. Mitchell, Robert M. Flight, Qing Jun Wang, Richard M. Higashi, Teresa W.-M. Fan, Andrew N. Lane, Hunter N. B. Moseley, Liangqun Lu, Bernie J. Daigle, Xi Chen, Andrey Smelter, Li Chen, Bailey K. Phan, Nathaniel J. Serpico, Ethan G. Toney, Caroline E. Melton, Jennifer R. Mandel, Bernie J. Daigle Jr., Hao Chen, Kazi I. Zaman, Ramin Homayouni, Patrick J. Trainor, Samantha M. Carlisle, Andrew P. DeFilippis, Shesh N. Rai
2017	—	`conf`	Rapid and Reusable Text Visualization and Exploration Development with DELVE. CRI Daniel R. Harris, Ramakanth Kavuluru, Jerzy W. Jaromczyk, Todd R. Johnson
2017	—	`conf`	Using closure tables to enable cross-querying of ontologies in database-driven applications. BHI Daniel R. Harris, Darren W. Henderson, Jeffery C. Talbert
2016	J	`jnl`	Foundations of reusable and interoperable facet models using category theory. Inf. Syst. Frontiers Daniel R. Harris
2016	—	`conf`	Informatics-based challenges of building collaborative healthcare research and analysis networks from rural community health centers. BHI Daniel R. Harris, Tamela J. Harper, Darren W. Henderson, Keith W. Henry, Jeffery C. Talbert
2016	Misc	`conf`	Modeling Integration and Reuse of Heterogeneous Terminologies in Faceted Browsing Systems. IRI Daniel R. Harris
2016	—	`conf`	Using i2b2 to bootstrap rural health analytics and learning networks. EMBC Daniel R. Harris, Adam D. Baus, Tamela J. Harper, Traci D. Jarrett, Cecil R. Pollard, Jeffery C. Talbert
2016	—	`conf`	i2b2t2: Unlocking Visualization for Clinical Research. CRI Daniel R. Harris, Darren W. Henderson
2015	—	`conf`	Modeling Faceted Browsing with Category Theory to Support Interoperability and Reuse. JCDL Daniel R. Harris
2015	Misc	`conf`	Modeling Reusable and Interoperable Faceted Browsing Systems with Category Theory. IRI Daniel R. Harris
2014	J	`jnl`	An adaptive landscape for training in the essentials of next gen sequencing data acquisition and bioinformatic analysis. BMC Bioinform. Mark L. Farman, Patrick Calie, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Neil Moore, Daniel R. Harris, Christopher L. Schardl
2014	J	`jnl`	Using Common Table Expressions to Build a Scalable Boolean Query Generator for Clinical Data Warehouses. IEEE J. Biomed. Health Informatics Daniel R. Harris, Darren W. Henderson, Ramakanth Kavuluru, Arnold J. Stromberg, Todd R. Johnson
2013	—	`conf`	Unsupervised Extraction of Diagnosis Codes from EMRs Using Knowledge-Based and Extractive Text Summarization Techniques. Canadian AI Ramakanth Kavuluru, Sifei Han, Daniel R. Harris
2012	—	`conf`	A Knowledge-Based Approach to Syntactic Disambiguation of Biomedical Noun Compounds. COLING (Posters) Ramakanth Kavuluru, Daniel R. Harris
2012	Misc	`conf`	Improving Scalability and Performance of i2b2 Query Processing Using Common Table Expressions. AMIA Darren W. Henderson, Daniel R. Harris, Ramakanth Kavuluru, Todd R. Johnson
2010	J	`jnl`	Experimenting with database segmentation size vs time performance for mpiBLAST on an IBM HS21 blade cluster. BMC Bioinform. Daniel R. Harris, Jerzy W. Jaromczyk, Christopher L. Schardl