Daniel MacLean

19 papers B 5C 1Journal 13
YearRankTypeTitle / Venue / Authors
2019 J jnl
Rapid fine mapping of causative mutations from sets of unordered, contig-sized fragments of genome sequence.
BMC Bioinform.
Ghanasyam Rallapalli, Pilar Corredor-Moreno, Edward Chalstrey, Martin Page, Daniel MacLean
2015 J jnl
The GOBLET training portal: a global repository of bioinformatics training materials, courses and trainers.
Bioinform.
Manuel Corpas, Rafael C. Jiménez, Erik Bongcam-Rudloff, Aidan Budd, Michelle D. Brazas, Pedro L. Fernandes, Bruno A. Gaëta, Celia W. G. van Gelder, Eija Korpelainen, Fran Lewitter, Annette McGrath, Daniel MacLean, Patricia M. Palagi, Kristian Rother, Jan Taylor, Allegra Via, Mick Watson, Maria Victoria Schneider, Teresa K. Attwood
2013 J jnl
SVGenes: a library for rendering genomic features in scalable vector graphic format.
Bioinform.
Graham J. Etherington, Daniel MacLean
2012 J jnl
Bio-samtools: Ruby bindings for SAMtools, a library for accessing BAM files containing high-throughput sequence alignments.
Source Code Biol. Medicine
Ricardo Ramirez-Gonzalez, Raoul Jean Pierre Bonnal, Mario Cáccamo, Daniel MacLean
2012 J jnl
Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics.
Bioinform.
Raoul Jean Pierre Bonnal, Jan Aerts, George Githinji, Naohisa Goto, Daniel MacLean, Chase A. Miller, Hiroyuki Mishima, Massimiliano Pagani, Ricardo Ramirez-Gonzalez, Geert Smant, Francesco Strozzi, Rob Syme, Rutger A. Vos, Trevor J. Wennblom, Ben J. Woodcroft, Toshiaki Katayama, Pjotr Prins
2011 J jnl
Gee Fu: a sequence version and web-services database tool for genomic assembly, genome feature and NGS data.
Bioinform.
Ricardo Ramirez-Gonzalez, Mario Cáccamo, Daniel MacLean
2011 J jnl
TurSOM: A paradigm bridging Turing's unorganized machines and self-organizing maps demonstrating dual self-organization.
Neurocomputing
Derek Beaton, Iren Valova, Daniel MacLean
2010 J jnl
CQoCO: A measure for comparative quality of coverage and organization for self-organizing maps.
Neurocomputing
Derek Beaton, Iren Valova, Daniel MacLean
2010 J jnl
Finding sRNA generative locales from high-throughput sequencing data with NiBLS.
BMC Bioinform.
Daniel MacLean, Vincent Moulton, David J. Studholme
2010 J jnl
Fractal initialization for high-quality mapping with self-organizing maps.
Neural Comput. Appl.
Iren Valova, Derek Beaton, Alexandre Buer, Daniel MacLean
2010 J jnl
NIPSOM: Parallel Architecture and Implementation of a Growing SOM.
Comput. J.
Iren Valova, Derek Beaton, Daniel MacLean, John Hammond
2010 J jnl
PhosPhAt: the
Nucleic Acids Res.
Pawel Durek, Robert Schmidt, Joshua L. Heazlewood, Alexandra Jones, Daniel MacLean, Axel Nagel, Birgit Kersten, Waltraud X. Schulze
2009 B conf
Growing mechanisms and cluster identification with TurSOM.
IJCNN
Derek Beaton, Iren Valova, Daniel MacLean
2009 B conf
The Use of TurSOM for Color Image Segmentation.
SMC
Derek Beaton, Iren Valova, Daniel MacLean
2009 B conf
TurSOM: A Turing inspired Self-Organizing Map.
IJCNN
Derek Beaton, Iren Valova, Daniel MacLean
2008 J jnl
A toolkit for analysing large-scale plant small RNA datasets.
Bioinform.
Simon Moxon, Frank Schwach, Tamas Dalmay, Daniel MacLean, David J. Studholme, Vincent Moulton
2008 C conf
Identification of Patterns via Region-Growing Parallel SOM Neural Network.
ICMLA
Iren Valova, Daniel MacLean, Derek Beaton
2007 B conf
Parallel Growing SOM Monitored by Genetic Algorithm.
IJCNN
Daniel MacLean, Iren Valova
2006 B conf
A Parallel Implementation of a Growing SOM Promoting Independent Neural Networks over Distributed Input Space.
IJCNN
John Hammond, Daniel MacLean, Iren Valova