Daniel Kahn

24 papers B 1Misc 2Journal 21
YearRankTypeTitle / Venue / Authors
2015 J jnl
The InterPro protein families database: the classification resource after 15 years.
Nucleic Acids Res.
Alex L. Mitchell, Hsin-Yu Chang, Louise C. Daugherty, Matthew Fraser, Sarah Hunter, Rodrigo Lopez, Craig McAnulla, Conor McMenamin, Gift Nuka, Sebastien Pesseat, Amaia Sangrador-Vegas, Maxim Scheremetjew, Claudia Rato, Siew-Yit Yong, Alex Bateman, Marco Punta, Teresa K. Attwood, Christian J. A. Sigrist, Nicole Redaschi, Catherine Rivoire, Ioannis Xenarios, Daniel Kahn, Dominique Guyot, Peer Bork, Ivica Letunic, Julian Gough, Matt E. Oates, Daniel H. Haft, Hongzhan Huang, Darren A. Natale, Cathy H. Wu, Christine A. Orengo, Ian Sillitoe, Huaiyu Mi, Paul D. Thomas, Robert D. Finn
2014 J jnl
An Affordable Open-Source Turbidimeter.
Sensors
Christopher D. Kelley, Alexander Krolick, Logan G. Brunner, Alison Burklund, Daniel Kahn, William P. Ball, Monroe Weber-Shirk
2012 J jnl
High-quality sequence clustering guided by network topology and multiple alignment likelihood.
Bioinform.
Vincent Miele, Simon Penel, Vincent Daubin, Franck Picard, Daniel Kahn, Laurent Duret
2012 J jnl
InterPro in 2011: new developments in the family and domain prediction database.
Nucleic Acids Res.
Sarah Hunter, Philip Jones, Alex L. Mitchell, Rolf Apweiler, Teresa K. Attwood, Alex Bateman, Thomas Bernard, David Binns, Peer Bork, Sarah W. Burge, Edouard De Castro, Penny C. Coggill, Matthew Corbett, Ujjwal Das, Louise C. Daugherty, Lauranne Duquenne, Robert D. Finn, Matthew Fraser, Julian Gough, Daniel H. Haft, Nicolas Hulo, Daniel Kahn, Elizabeth Kelly, Ivica Letunic, David Lonsdale, Rodrigo Lopez, Martin Madera, John Maslen, Craig McAnulla, Jennifer McDowall, Conor McMenamin, Huaiyu Mi, Prudence Mutowo-Meullenet, Nicola J. Mulder, Darren A. Natale, Christine A. Orengo, Sebastien Pesseat, Marco Punta, Antony F. Quinn, Catherine Rivoire, Amaia Sangrador-Vegas, Jeremy D. Selengut, Christian J. A. Sigrist, Maxim Scheremetjew, John G. Tate, Manjulapramila Thimmajanarthanan, Paul D. Thomas, Cathy H. Wu, Corin Yeats, Siew-Yit Yong
2011 J jnl
Identification of metabolic network models from incomplete high-throughput datasets.
Bioinform.
Sara Berthoumieux, Matteo Brilli, Hidde de Jong, Daniel Kahn, Eugenio Cinquemani
2010 J jnl
The Carbon Assimilation Network in
PLoS Comput. Biol.
Valentina Baldazzi, Delphine Ropers, Yves Markowicz, Daniel Kahn, Johannes Geiselmann, Hidde de Jong
2009 J jnl
InterPro: the integrative protein signature database.
Nucleic Acids Res.
Sarah Hunter, Rolf Apweiler, Teresa K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Peer Bork, Ujjwal Das, Louise C. Daugherty, Lauranne Duquenne, Robert D. Finn, Julian Gough, Daniel H. Haft, Nicolas Hulo, Daniel Kahn, Elizabeth Kelly, Aurélie Laugraud, Ivica Letunic, David Lonsdale, Rodrigo Lopez, Martin Madera, John Maslen, Craig McAnulla, Jennifer McDowall, Jaina Mistry, Alex L. Mitchell, Nicola J. Mulder, Darren A. Natale, Christine A. Orengo, Antony F. Quinn, Jeremy D. Selengut, Christian J. A. Sigrist, Manjula Thimma, Paul D. Thomas, Franck Valentin, Derek Wilson, Cathy H. Wu, Corin Yeats
2008 B conf
Parallel Large Scale Inference of Protein Domain Families.
ICPADS
Daniel Kahn, Clément Rezvoy, Frédéric Vivien
2007 J jnl
New developments in the InterPro database.
Nucleic Acids Res.
Nicola J. Mulder, Rolf Apweiler, Teresa K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Peer Bork, Virginie Buillard, Lorenzo Cerutti, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Louise C. Daugherty, Mark Dibley, Robert D. Finn, Wolfgang Fleischmann, Julian Gough, Daniel H. Haft, Nicolas Hulo, Sarah Hunter, Daniel Kahn, Alexander Kanapin, Anish Kejariwal, Alberto Labarga, Petra S. Langendijk-Genevaux, David Lonsdale, Rodrigo Lopez, Ivica Letunic, Martin Madera, John Maslen, Craig McAnulla, Jennifer McDowall, Jaina Mistry, Alex L. Mitchell, Anastasia N. Nikolskaya, Sandra E. Orchard, Christine A. Orengo, Robert Petryszak, Jeremy D. Selengut, Christian J. A. Sigrist, Paul D. Thomas, Franck Valentin, Derek Wilson, Cathy H. Wu, Corin Yeats
2005 J jnl
InterPro, progress and status in 2005.
Nucleic Acids Res.
Nicola J. Mulder, Rolf Apweiler, Teresa K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Paul Bradley, Peer Bork, Phillip Bucher, Lorenzo Cerutti, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Richard Durbin, Wolfgang Fleischmann, Julian Gough, Daniel H. Haft, Nicola Harte, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, David Lonsdale, Rodrigo Lopez, Ivica Letunic, Martin Madera, John Maslen, Jennifer McDowall, Alex L. Mitchell, Anastasia N. Nikolskaya, Sandra E. Orchard, Marco Pagni, Chris P. Ponting, Emmanuel Quevillon, Jeremy D. Selengut, Christian J. A. Sigrist, Ville Silventoinen, David J. Studholme, Robert Vaughan, Cathy H. Wu
2005 J jnl
The ProDom database of protein domain families: more emphasis on 3D.
Nucleic Acids Res.
Catherine Bru, Emmanuel Courcelle, Sébastien Carrère, Yoann Beausse, Sandrine Dalmar, Daniel Kahn
2003 J jnl
The InterPro Database, 2003 brings increased coverage and new features.
Nucleic Acids Res.
Nicola J. Mulder, Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Daniel Barrell, Alex Bateman, David Binns, Margaret Biswas, Paul Bradley, Peer Bork, Philipp Bucher, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Sam Griffiths-Jones, Daniel H. Haft, Nicola Harte, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, Rodrigo Lopez, Ivica Letunic, David Lonsdale, Ville Silventoinen, Sandra E. Orchard, Marco Pagni, David Peyruc, Chris P. Ponting, Jeremy D. Selengut, Florence Servant, Christian J. A. Sigrist, Robert Vaughan, Evgeni M. Zdobnov
2002 J jnl
InterPro: An Integrated Documentation Resource for Protein Families, Domains and Functional Sites
Briefings Bioinform.
Nicola J. Mulder, Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Margaret Biswas, Paul Bradley, Peer Bork, Philipp Bucher, Richard R. Copley, Emmanuel Courcelle, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Sam Griffiths-Jones, Daniel H. Haft, Henning Hermjakob, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, Rodrigo Lopez, Ivica Letunic, Sue Orchard, Marco Pagni, David Peyruc, Chris P. Ponting, Florence Servant, Christian J. A. Sigrist
2002 J jnl
ProDom: Automated Clustering of Homologous Domains.
Briefings Bioinform.
Florence Servant, Catherine Bru, Sébastien Carrère, Emmanuel Courcelle, Jérôme Gouzy, David Peyruc, Daniel Kahn
2001 J jnl
The InterPro database, an integrated documentation resource for protein families, domains and functional sites.
Nucleic Acids Res.
Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, Ewan Birney, Margaret Biswas, Philipp Bucher, Lorenzo Cerutti, Florence Corpet, Michael D. R. Croning, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob, Nicolas Hulo, Inge Jonassen, Daniel Kahn, Alexander Kanapin, Youla Karavidopoulou, Rodrigo Lopez, Beate Marx, Nicola J. Mulder, Thomas M. Oinn, Marco Pagni, Florence Servant, Christian J. A. Sigrist, Evgeni M. Zdobnov
2000 J jnl
InterPro-an integrated documentation resource for protein families, domains and functional sites.
Bioinform.
Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, Ewan Birney, Margaret Biswas, Philipp Bucher, Lorenzo Cerutti, Florence Corpet, Michael D. R. Croning, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob, Nicolas Hulo, Inge Jonassen, Daniel Kahn, Alexander Kanapin, Youla Karavidopoulou, Rodrigo Lopez, Beate Marx, Nicola J. Mulder, Thomas M. Oinn, Marco Pagni, Florence Servant, Christian J. A. Sigrist, Evgeni M. Zdobnov
2000 J jnl
ProDom and ProDom-CG: tools for protein domain analysis and whole genome comparisons.
Nucleic Acids Res.
Florence Corpet, Florence Servant, Jérôme Gouzy, Daniel Kahn
1999 J jnl
Browsing protein families via the 'Rich Family Description' format.
Bioinform.
Florence Corpet, Jérôme Gouzy, Daniel Kahn
1999 J jnl
Recent improvements of the ProDom database of protein domain families.
Nucleic Acids Res.
Florence Corpet, Jérôme Gouzy, Daniel Kahn
1999 J jnl
Whole Genome Protein Domain Analysis using a New Method for Domain Clustering.
Comput. Chem.
Jérôme Gouzy, Florence Corpet, Daniel Kahn
1998 J jnl
The ProDom database of protein domain families.
Nucleic Acids Res.
Florence Corpet, Jérôme Gouzy, Daniel Kahn
1997 J jnl
XDOM, a graphical tool to analyse domain arrangements in any set of protein sequences.
Comput. Appl. Biosci.
Jérôme Gouzy, P. Eugène, Elizabeth A. Greene, Daniel Kahn, Florence Corpet
1990 Misc conf
Information-theoretic distortion measures for speech recognition: theoretical considerations and experimental results.
ICASSP
Yi-Teh Lee, Daniel Kahn
1986 Misc conf
Experiments in speech recognition over the telephone network.
ICASSP
Daniel Kahn, Anand Gnanadesikan