Daniel A. Ashlock

218 papers A 2B 82C 52Journal 35Unranked 39

Year	Rank	Type	Title / Venue / Authors
2024	J	`jnl`	Anchor Clustering for million-scale immune repertoire sequencing data. BMC Bioinform. Haiyang Chang, Daniel A. Ashlock, Steffen P. Graether, Stefan M. Keller
2023	J	`jnl`	A Representation for Many Player Generalized Divide the Dollar Games. Games Garrison W. Greenwood, Daniel A. Ashlock
2023	J	`jnl`	Models of Representation in Computational Intelligence [Guest Editorial]. IEEE Comput. Intell. Mag. Marco S. Nobile, Luca Manzoni, Daniel A. Ashlock, Rong Qu
2022	J	`jnl`	A novel linear representation for evolving matrices. Soft Comput. Connor Gregor, Daniel A. Ashlock, Gonzalo A. Ruz, Duncan MacKinnon, David Kribs
2022	J	`jnl`	Editorial: 2020 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (IEEE CIBCB 2020). Biosyst. Gonzalo A. Ruz, Daniel A. Ashlock, Richard Allmendinger, Gary B. Fogel
2022	B	`conf`	Evolving Neural Networks for a Generalized Divide the Dollar Game. CEC Garrison W. Greenwood, Daniel A. Ashlock
2022	C	`conf`	Local Bubble Dilation Functions: Hypersphere-bounded Landscape Deformations Simplify Global Optimization. CIBCB Daniele M. Papetti, Vasco Coelho, Daniel A. Ashlock, Paolo Cazzaniga, Simone Spolaor, Daniela Besozzi, Marco S. Nobile
2021	C	`conf`	A Comparison of Novel Representations for Evolving Epidemic Networks. CIBCB Daniel A. Ashlock, Michael Dubé
2021	—	`conf`	A Family of Turn Based Strategy Games with Moose. SSCI Daniel A. Ashlock, Joseph Alexander Brown, Connor Gregor, Munir Makhmutov
2021	J	`jnl`	A comparison of the Moran Process and replicator equations for evolving social dilemma game strategies. Biosyst. Garrison W. Greenwood, Daniel A. Ashlock
2021	J	`jnl`	An Evolutionary Algorithm with Crossover and Mutation for Model-Based Clustering. J. Classif. Sharon M. McNicholas, Paul D. McNicholas, Daniel A. Ashlock
2021	B	`conf`	If You Can't Beat It, Squash It: Simplify Global Optimization by Evolving Dilation Functions. CEC Daniele M. Papetti, Daniel A. Ashlock, Paolo Cazzaniga, Daniela Besozzi, Marco S. Nobile
2021	—	`book`	Mathematical Problem Factories: Almost Endless Problem Generation Andrew McEachern, Daniel A. Ashlock
2021	B	`conf`	Necrotic Behavioral Control of Agent Behavior in the Iterated Prisoner's Dilemma. CEC Amanda Saunders, Daniel A. Ashlock, Julie Greensmith
2021	C	`conf`	One Moose, Two Moose, Three Fields, More? CIBCB Daniel A. Ashlock, Joseph Alexander Brown, Sheridan K. Houghten, Munir Makhmutov
2021	—	`conf`	Procedural Content Generation of Levels with Increased Connectedness using Complex String Generators. SSCI Michael Dubé, Daniel A. Ashlock
2021	C	`conf`	Representational Sensitivity for Divide the Dollar Playing Agents. CoG Andrew Dong, Daniel A. Ashlock
2021	C	`conf`	Ring Optimization of Epidemic Contact Networks. CIBCB Daniel A. Ashlock, Joseph Alexander Brown, Wendy Ashlock, Michael Dubé
2021	—	`conf`	The Non-Walking Triangle Optimization Representation: Enabling Monte Carlo Tree Search-like Methods for Real Parameter Optimization Problems. SSCI Rachel Brown, Daniel A. Ashlock
2020	J	`jnl`	A polyomino puzzle for arithmetic practice. ICGA J. Jérémy Foxcroft, Daniel A. Ashlock
2020	—	`book`	An Introduction to Proofs with Set Theory Daniel A. Ashlock, Colin Lee
2020	B	`conf`	Clustering Julia Set Examples to Enhance Evolution of Fractal Parameters. CEC Andrew Dong, Daniel A. Ashlock
2020	B	`conf`	Evolutionary Graph Compression and Diffusion Methods for City Discovery in Role Playing Games. CEC Joseph Alexander Brown, Daniel A. Ashlock, Sheridan K. Houghten, Angelo Romualdo
2020	C	`conf`	Evolving the Curve. CIBCB Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock, James Alexander Hughes
2020	—	`conf`	Further Exploration of Necrotic Control of Evolved Art. SSCI Daniel A. Ashlock, Julie Greensmith
2020	B	`conf`	Modelling of Vaccination Strategies for Epidemics using Evolutionary Computation. CEC Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock
2020	C	`conf`	Monte Carlo Tree Search Strategies in 2-Player Iterated Prisoner Dilemma Games. CoG Garrison W. Greenwood, Daniel A. Ashlock
2020	B	`conf`	Necrotic Control of the Aesthetics of Evolved Art. CEC Daniel A. Ashlock, Julie Greensmith
2020	C	`conf`	Odd Distance Anchors for Rapid Clustering. CIBCB Daniel A. Ashlock, Haiyang Chang, Matthew Stoodley
2020	J	`jnl`	Testing a Protocol for Characterizing Game Playing Agents Trained via Evolution on a New Game. IEEE Trans. Games Eun-Youn Kim, Daniel A. Ashlock
2020	C	`conf`	Vaccinating a Population is a Programming Problem. CIBCB James Alexander Hughes, Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock
2020	—	`conf`	We Are Not Pontius Pilate: Acknowledging Ethics and Policy. SSCI James Alexander Hughes, William Hannah, Peter Kikkert, Barry MacKenzie, Wendy Ashlock, Sheridan K. Houghten, Daniel A. Ashlock, Matthew Stoodley, Michael Dubé, Rachel Brown, Amanda Saunders
2020	B	`conf`	Which random is the best random? A study on sampling methods in Fourier surrogate modeling. CEC Marco S. Nobile, Simone Spolaor, Paolo Cazzaniga, Daniele M. Papetti, Daniela Besozzi, Daniel A. Ashlock, Luca Manzoni
2019	B	`conf`	A Greedy, Generative, Lattice Representation for Point Packing. CEC Daniel A. Ashlock, Jeremy Gilbert
2019	B	`conf`	Applying an Adaptive Generative Representation to the Investigation of Affordances in Puzzles. CEC Daniel A. Ashlock, James Montgomery
2019	C	`conf`	Automatic Generation of Diverse Cavern Maps with Morphing Cellular Automata. CoG Matthew Kreitzer, Daniel A. Ashlock, Rajesh Pereira
2019	C	`conf`	Automatic Generation of Level Maps with the Do What's Possible Representation. CoG Daniel A. Ashlock, Christoph Salge
2019	J	`jnl`	Automatic Generation of Level Maps with the Do What's Possible Representation. CoRR Daniel A. Ashlock, Christoph Salge
2019	B	`conf`	Dilation Functions in Global Optimization. CEC Marco S. Nobile, Paolo Cazzaniga, Daniel A. Ashlock
2019	—	`book`	Fast Start Advanced Calculus Daniel A. Ashlock
2019	—	`book`	Fast Start Differential Calculus Daniel A. Ashlock
2019	—	`book`	Fast Start Integral Calculus Daniel A. Ashlock
2019	J	`jnl`	Identification of critical connectors in the directed reaction-centric graphs of microbial metabolic networks. BMC Bioinform. Eun-Youn Kim, Daniel A. Ashlock, Sung Ho Yoon
2019	C	`conf`	Implementing Phenotypic Plasticity with an Adaptive Generative Representation. CIBCB Daniel A. Ashlock, Wendy Ashlock, James Montgomery
2019	C	`conf`	Large Block Matching Characters for Dehydrin Classification. CIBCB Daniel A. Ashlock, Sierra Gillis, Amanda Saunders, Andrew Riley
2019	B	`conf`	Modelling Standard Work with Simple Virtual Agents. CEC Daniel A. Ashlock, Amanda Saunders, James Marshall, David Calder
2019	C	`conf`	Monte Carlo Strategies for Exploiting Fairness in N-player Ultimatum Games. CoG Garrison W. Greenwood, Daniel A. Ashlock
2019	C	`conf`	Pandemic: A Graph Evolution Story. CIBCB Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock
2019	B	`conf`	Parameter Tuning of a Peak Fitting Algorithm with an Evolved Experimental Design. CEC Rachel Brown, Daniel A. Ashlock
2019	C	`conf`	Prisoner's Dilemma Agents with Phenotypic Plasticity. CoG Daniel A. Ashlock, Eun-Youn Kim, Amanda Saunders
2019	B	`conf`	Representation for Evolution of Epidemic Models. CEC Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock
2019	C	`conf`	The Riddle of Togelby. CoG Daniel A. Ashlock, Christoph Salge
2019	J	`jnl`	The Riddle of Togelby. CoRR Daniel A. Ashlock, Christoph Salge
2018	J	`jnl`	Computational Intelligence Techniques in Bioinformatics and Bioengineering [Guest Editorial]. IEEE Comput. Intell. Mag. Richard Allmendinger, Daniel A. Ashlock, Sansanee Auephanwiriyakul
2018	C	`conf`	Data driven point packing for fast clustering. CIBCB Matthew Stoodley, Daniel A. Ashlock, Steffen Graether
2018	—	`conf`	Evolving Diverse Cellular Automata Based Level Maps. SEDA Daniel A. Ashlock, Matthew Kreitzer
2018	—	`conf`	Evolving Number Sentence Morphing Puzzles. CIG Daniel A. Ashlock, Courtney Kolthof
2018	B	`conf`	Exploiting Fertility to Enable Automatic Content Generation to Ameliorate User Fatigue in Interactive Evolutionary Computation. CEC Daniel A. Ashlock, Joseph Alexander Brown, Lolita Sultanaeva
2018	—	`book`	Exploring Representation in Evolutionary Level Design Daniel A. Ashlock
2018	C	`conf`	Hierarchical clustering and tree stability. CIBCB Amanda Saunders, Daniel A. Ashlock, Sheridan K. Houghten
2018	B	`conf`	On the Evolution of Fairness in N-player Ultimatum Games. CEC Garrison W. Greenwood, Daniel A. Ashlock
2018	C	`conf`	Parameter selection for modeling of epidemic networks. CIBCB Michael Dubé, Sheridan K. Houghten, Daniel A. Ashlock
2018	—	`conf`	Toward General Mathematical Game Playing Agents. CIG Daniel A. Ashlock, Eun-Youn Kim, Diego Pérez-Liébana
2018	B	`conf`	Two Population Studies of Evolving Game Playing Agents. CEC Daniel A. Ashlock, Eun-Youn Kim
2017	C	`conf`	A note on population size inspired by the extinction of mammoths. CIBCB Daniel A. Ashlock, Wendy Ashlock
2017	C	`conf`	A novel representation for boolean networks designed to enhance heritability and scalability. CIBCB Daniel A. Ashlock, Gonzalo A. Ruz
2017	B	`conf`	Applying the biased form of the adaptive generative representation. CEC James Montgomery, Daniel A. Ashlock
2017	J	`jnl`	Changing Resources Available to Game Playing Agents: Another Relevant Design Factor in Agent Experiments. IEEE Trans. Comput. Intell. AI Games Eun-Youn Kim, Daniel A. Ashlock
2017	B	`conf`	Evolutionary design of FRAX decks. CEC Daniel A. Ashlock, Andrew McEachern
2017	—	`conf`	General video game playing escapes the no free lunch theorem. CIG Daniel A. Ashlock, Diego Pérez-Liébana, Amanda Saunders
2017	C	`conf`	Hybridization and ring optimization for larger sets of embeddable biomarkers. CIBCB Daniel A. Ashlock, Sheridan K. Houghten
2017	C	`conf`	Inferring bistable lac operen Boolean regulatory networks using evolutionary computation. CIBCB Gonzalo A. Ruz, Daniel A. Ashlock, Thomas Ledger, Eric Goles
2017	C	`conf`	Infinite string block matching features for DNA classification. CIBCB Daniel A. Ashlock, Sierra Gillis, Wendy Ashlock
2017	B	`conf`	Modeling undependable subsidies with three-player generalized divide the dollar. CEC Daniel A. Ashlock, Garrison W. Greenwood
2017	J	`jnl`	Network induction for epidemic profiles with a novel representation. Biosyst. Meghan Timmins, Daniel A. Ashlock
2017	—	`book`	On the Design of Game-Playing Agents Eun-Youn Kim, Daniel A. Ashlock
2017	—	`conf`	Using multiple worlds for multiple agent roles in games. CIG Joseph Alexander Brown, Daniel A. Ashlock
2016	B	`conf`	Adding local edge mobility to graph evolution. CEC Daniel A. Ashlock, Meghan Timmins
2016	B	`conf`	An adaptive generative representation for evolutionary computation. CEC Daniel A. Ashlock, James Montgomery
2016	B	`conf`	Conway crossover to create hyperdimensional point packings, with applications. CEC Daniel A. Ashlock, Steffen Graether
2016	B	`conf`	Evolutionary partitioning regression with function stacks. CEC Daniel A. Ashlock, Joseph Alexander Brown
2016	B	`conf`	Evolvable warps for data normalization. CEC Jeremy Gilbert, Daniel A. Ashlock
2016	B	`conf`	Evolving polyomino puzzles. CEC Daniel A. Ashlock, Lauren Taylor
2016	B	`conf`	Generalized divide the dollar. CEC Daniel A. Ashlock, Garrison W. Greenwood
2016	—	`conf`	Multiple Worlds Model of Evolution for demographic appropriate radio playlists. SSCI Joseph Alexander Brown, Daniel A. Ashlock
2016	J	`jnl`	Restarting and recentering genetic algorithm variations for DNA fragment assembly: The necessity of a multi-strategy approach. Biosyst. James Alexander Hughes, Sheridan K. Houghten, Daniel A. Ashlock
2016	C	`conf`	Revisiting epidemic network evolution with a new representation. CIBCB Meghan Timmins, Daniel A. Ashlock
2016	B	`conf`	The do what's possible representation. CEC Daniel A. Ashlock, Sierra Gillis, Andrew McEachern, Jeffrey Tsang
2016	B	`conf`	The impact of elite fraction and population size on evolved iterated prisoner's dilemma agents. CEC Daniel A. Ashlock, Eun-Youn Kim
2015	B	`conf`	A class of representations for evolving graphs. CEC Daniel A. Ashlock, Lee-Ann Barlow
2015	C	`conf`	A comparison of incremental community assembly with evolutionary community selection. CIBCB Daniel A. Ashlock, Meghan Timmins
2015	C	`conf`	Chaos automata for sequence visualization. CIBCB Daniel A. Ashlock, Cameron McGuinness, Wendy Ashlock
2015	B	`conf`	Evolution of 2D apoptotic cellular automata. CEC Jennifer Garner, Daniel A. Ashlock
2015	J	`jnl`	Evolutionary Nonlinear Projection. IEEE Trans. Evol. Comput. Daniel A. Ashlock, Andrew McEachern
2015	—	`conf`	Evolvable fashion-based cellular automata for generating cavern systems. CIG Daniel A. Ashlock
2015	C	`conf`	Evolving DNA classifiers with extinction based ring optimization. CIBCB Daniel A. Ashlock, Sierra Gillis, Jennifer Garner, Gary B. Fogel
2015	—	`conf`	Evolving Point Packings in the Plane. ACALCI Daniel A. Ashlock, Philip Hingston, Cameron McGuinness
2015	B	`conf`	Evolving fractal art with a directed acyclic graph genetic programming representation. CEC Daniel A. Ashlock, Jeffrey Tsang
2015	B	`conf`	Flow of control in linear genetic programming. CEC Justin Schonfeld, Daniel A. Ashlock
2015	C	`conf`	Interactive evolution instead of default parameters. CIBCB Daniel A. Ashlock, Cameron McGuinness, Joseph O'Neill
2015	C	`conf`	Lexicode crossover for embeddable biomarkers. CIBCB Daniel A. Ashlock, Sheridan K. Houghten
2015	J	`jnl`	Multiple Opponent Optimization of Prisoner's Dilemma Playing Agents. IEEE Trans. Comput. Intell. AI Games Daniel A. Ashlock, Joseph Alexander Brown, Philip Hingston
2015	B	`conf`	Ring optimization with extinction. CEC Daniel A. Ashlock, Sierra Gillis, Gary B. Fogel
2015	C	`conf`	Stress and productivity performance in the workforce modelled with binary decision automata. CIBCB Matthew Page, Daniel A. Ashlock
2015	—	`conf`	The Impact of Obstruction on a Model of Competitive Exclusion in Plants. SSCI Jeffrey Tsang, Daniel A. Ashlock
2015	—	`conf`	Tutorial II: Representations for evolutionary computation in games. CIG Daniel A. Ashlock
2015	C	`conf`	Varying decision inputs in Prisoner's Dilemma. CIBCB Lee-Ann Barlow, Daniel A. Ashlock
2014	—	`conf`	A discrete representation for real optimization with unique search properties. FOCI Daniel A. Ashlock, Jeremy Gilbert
2014	J	`jnl`	A novel engineering tool for creative design of fluid systems. Eng. Comput. Peter E. Johnson, Daniel A. Ashlock, Kenneth Mark Bryden
2014	C	`conf`	Agent-based modelling of resource flow in plant networks. CIBCB Daniel A. Ashlock, Asena Goren
2014	—	`conf`	Automatic generation of fantasy role-playing modules. CIG Daniel A. Ashlock, Cameron McGuinness
2014	C	`conf`	Recentering and Restarting Genetic Algorithm variations for DNA Fragment Assembly. CIBCB James Alexander Hughes, Sheridan K. Houghten, Guillermo M. Mallén-Fullerton, Daniel A. Ashlock
2014	J	`jnl`	Recentering and restarting a genetic algorithm using a generative representation for an ordered gene problem. Int. J. Hybrid Intell. Syst. James Alexander Hughes, Sheridan K. Houghten, Daniel A. Ashlock
2014	C	`conf`	Shape control of side effect machines for DNA classification. CIBCB Andrew McEachern, Daniel A. Ashlock
2014	—	`conf`	Shaped prisoner's dilemma automata. CIG Wendy Ashlock, Daniel A. Ashlock
2014	—	`conf`	Test problems and representations for graph evolution. FOCI Daniel A. Ashlock, Justin Schonfeld, Lee-Ann Barlow, Colin Lee
2014	—	`conf`	The evolution of exploitation. FOCI Wendy Ashlock, Jeffrey Tsang, Daniel A. Ashlock
2014	C	`conf`	Using associators to generate ensemble biclustering from multiple evolved biclusterings. CIBCB Eun-Youn Kim, Daniel A. Ashlock
2014	B	`conf`	∗Tego - A framework for adversarial planning. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Philip Hingston
2013	J	`jnl`	Agent-Case Embeddings for the Analysis of Evolved Systems. IEEE Trans. Evol. Comput. Daniel A. Ashlock, Colin Lee
2013	—	`conf`	An agent based model of stress in the workplace. EAIS Daniel A. Ashlock, Matthew Page
2013	B	`conf`	Binary decision automata modelling stress in the workplace. IEEE Congress on Evolutionary Computation Matthew Page, Daniel A. Ashlock
2013	—	`conf`	Creativity and competitiveness in polyomino-developing game playing agents. CIG Daniel A. Ashlock, Jeremy Gilbert
2013	J	`jnl`	Development of antibiotic regimens using graph based evolutionary algorithms. Biosyst. Steven M. Corns, Daniel A. Ashlock, Kenneth Mark Bryden
2013	B	`conf`	Edit metric decoding: Representation strikes back. IEEE Congress on Evolutionary Computation James Alexander Hughes, Joseph A. Brown, Sheridan K. Houghten, Daniel A. Ashlock
2013	B	`conf`	Evolutionary cellular automata bonsai. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Carolyn Pugh
2013	J	`jnl`	Fitness Landscapes of Evolved Apoptotic Cellular Automata. IEEE Trans. Evol. Comput. Daniel A. Ashlock, Sharon McNicholas
2013	B	`conf`	Functions for the analysis of exploration and exploitation. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Nikola Krsic, Gary B. Fogel
2013	J	`jnl`	Guest Editorial: Special Issue on Understanding Complex Evolutionary Systems. IEEE Trans. Evol. Comput. Daniel A. Ashlock, Graham Kendall, Siang Yew Chong
2013	—	`conf`	Landscape automata for search based procedural content generation. CIG Daniel A. Ashlock, Cameron McGuinness
2013	—	`conf`	Recentering, reanchoring & restarting an evolutionary algorithm. NaBIC James Alexander Hughes, Sheridan K. Houghten, Daniel A. Ashlock
2013	J	`jnl`	Sequence classification with side effect machines evolved via ring optimization. Biosyst. Andrew McEachern, Daniel A. Ashlock, Justin Schonfeld
2013	—	`conf`	The impact of connection topology and agent size on cooperation in the iterated prisoner's dilemma. CIG Lee-Ann Barlow, Daniel A. Ashlock
2013	—	`conf`	The impact of varying resources available to Iterated Prisoner's Dilemma agents. FOCI Daniel A. Ashlock, Eun-Youn Kim
2013	B	`conf`	Woven string kernels for DNA sequence classification. IEEE Congress on Evolutionary Computation Andrew McEachern, Daniel A. Ashlock
2012	C	`conf`	A model of competitive exclusion in plants. CIBCB Daniel A. Ashlock, Erin Wild
2012	—	`conf`	Deck-based prisoner's dilemma. CIG Daniel A. Ashlock, Elizabeth Knowles
2012	B	`conf`	Evolutionary games and the study of cooperation: Why has so little progress been made? IEEE Congress on Evolutionary Computation Garrison W. Greenwood, Daniel A. Ashlock
2012	C	`conf`	Evolving a social fabric to fit and epidemic profile. CIBCB Daniel A. Ashlock, Elisabeth Shiller
2012	—	`conf`	From competition to cooperation: Co-evolution in a rewards continuum. CIG Daniel A. Ashlock, Wendy Ashlock, Spyridon Samothrakis, Simon M. Lucas, Colin Lee
2012	B	`conf`	Impact of regulatory genes on optimization behavior. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Wendy Ashlock
2012	J	`jnl`	On the synthesis of DNA error correcting codes. Biosyst. Daniel A. Ashlock, Sheridan K. Houghten, Joseph Alexander Brown, John Orth
2012	—	`conf`	Representation in Evolutionary Computation. WCCI Daniel A. Ashlock, Cameron McGuinness, Wendy Ashlock
2012	B	`conf`	Single parent generalization of cellular automata rules. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Sharon McNicholas
2011	C	`conf`	A simulation of bacterial communities. CIBCB Daniel A. Ashlock, Andrew McEachern
2011	B	`conf`	Autogeneration of fractal photographic mosaic images. IEEE Congress on Evolutionary Computation Joseph A. Brown, Daniel A. Ashlock, John Orth, Sheridan K. Houghten
2011	B	`conf`	Comparison of evolved epidemic networks with diffusion characters. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Elisabeth Shiller, Colin Lee
2011	B	`conf`	Decomposing the level generation problem with tiles. IEEE Congress on Evolutionary Computation Cameron McGuinness, Daniel A. Ashlock
2011	C	`conf`	Designing artificial organisms for use in biological simulations. CIBCB Wendy Ashlock, Daniel A. Ashlock
2011	—	`conf`	Domination in Iterated Prisoner's Dilemma. CCECE Joseph Alexander Brown, Daniel A. Ashlock
2011	B	`conf`	Financial control of the evolution of autonomous non-player characters. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Sylvia Nguyen
2011	B	`conf`	Fitness functions for searching the Mandelbrot set. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Joseph A. Brown
2011	C	`conf`	Fitting contact networks to epidemic behavior with an evolutionary algorithm. CIBCB Daniel A. Ashlock, Elisabeth Shiller
2011	—	`conf`	Hormonal systems for prisoners dilemma agents. CIG Daniel A. Ashlock, Christopher Kuusela, Nicholas Rogers
2011	—	`conf`	Incorporating required structure into tiles. CIG Cameron McGuinness, Daniel A. Ashlock
2011	J	`jnl`	Search-Based Procedural Generation of Maze-Like Levels. IEEE Trans. Comput. Intell. AI Games Daniel A. Ashlock, Colin Lee, Cameron McGuinness
2011	B	`conf`	Shopkeeper strategies in the iterated prisoner's dilemma. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Christopher Kuusela, Monica Cojocaru
2011	J	`jnl`	Simultaneous Dual Level Creation for Games. IEEE Comput. Intell. Mag. Daniel A. Ashlock, Colin Lee, Cameron McGuinness
2011	B	`conf`	Translation tables: A genetic code in a evolutionary algorithm. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Justin Schonfeld, Paul D. McNicholas
2011	—	`conf`	Tutorials: Cultural Algorithms: Incorporating social intelligence into virtual worlds. CIG Robert G. Reynolds, Daniel A. Ashlock, Georgios N. Yannakakis, Julian Togelius, Mike Preuss
2010	—	`conf`	A fingerprint comparison of different Prisoner's Dilemma payoff matrices. CIG Daniel A. Ashlock, Eun-Youn Kim, Wendy Ashlock
2010	—	`conf`	Automatic generation of game elements via evolution. CIG Daniel A. Ashlock
2010	B	`conf`	Evolution for automatic assessment of the difficulty of sokoban boards. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Justin Schonfeld
2010	C	`conf`	Nearest neighbor training of side effect machines for sequence classification. CIBCB Daniel A. Ashlock, Andrew McEachern
2010	—	`conf`	Ring optimization of edit metric codes in DNA. BCB Daniel A. Ashlock, Sheridan K. Houghten
2010	C	`conf`	Side effect machines for quaternary edit metric decoding. CIBCB Joseph A. Brown, Sheridan K. Houghten, Daniel A. Ashlock
2010	B	`conf`	Virtual retroviruses in grid walkers: Effects on genome organization. IEEE Congress on Evolutionary Computation Wendy Ashlock, Daniel A. Ashlock
2009	C	`conf`	DNA error correcting codes: No crossover. CIBCB Daniel A. Ashlock, Sheridan K. Houghten
2009	C	`conf`	Diagnostic character location within the cryptic skipper butterfly species complex with an evolutionary algorithm. CIBCB Daniel A. Ashlock, Taika von Königslöw
2009	—	`conf`	Edit metric decoding: a new hope. C3S2E Joseph A. Brown, Sheridan K. Houghten, Daniel A. Ashlock
2009	B	`conf`	Evolved art via control of cellular automata. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Jeffrey Tsang
2009	J	`jnl`	Fingerprint Analysis of the Noisy Prisoner's Dilemma Using a Finite-State Representation. IEEE Trans. Comput. Intell. AI Games Daniel A. Ashlock, Eun-Youn Kim, Wendy Ashlock
2009	J	`jnl`	MULTI-K: accurate classification of microarray subtypes using ensemble k-means clustering. BMC Bioinform. Eun-Youn Kim, Seon-Young Kim, Daniel A. Ashlock, Dougu Nam
2009	B	`conf`	Robustness in evolved grid structures. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Justin Schonfeld, James Humphrey
2009	C	`conf`	Simulation of the impact of retroviruses on genome organization of an artificial organism. CIBCB Daniel A. Ashlock, Wendy Ashlock
2009	C	`conf`	Using diffusion characters for the taxonomy of self-organizing social networks. CIBCB Daniel A. Ashlock, Colin Lee
2008	B	`conf`	Behavioral regimes in the evolution of extremal epidemic graphs. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Fatemeh Jafargholi
2008	B	`conf`	Evolution of artificial ring species. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Taika von Konigslow
2008	J	`jnl`	Fingerprinting: Visualization and Automatic Analysis of Prisoner's Dilemma Strategies. IEEE Trans. Evol. Comput. Daniel A. Ashlock, Eun-Youn Kim
2008	B	`conf`	Small population effects and hybridization. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Kenneth Mark Bryden, Steven M. Corns
2008	B	`conf`	The geometry of Tartarus fitness cases. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Elizabeth Warner
2007	B	`conf`	A fractal representation for real optimization. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Justin Schonfeld
2007	—	`conf`	Cooperation in Prisoner's Dilemma on Graphs. CIG Daniel A. Ashlock
2007	B	`conf`	Fingerprint analysis of the noisy prisoner's dilemma. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Eun-Youn Kim, Wendy Ashlock
2006	B	`conf`	AMoEBA Image Segmentation: Modeling of Individual Voronoi Tessellations. IEEE Congress on Evolutionary Computation Nathan G. Johnson, Balu Karthikeyan, Daniel A. Ashlock, Kenneth M. Bryden
2006	B	`conf`	An Updated Taxonomy of Evolutionary Computation Problems using Graph-based Evolutionary Algorithms. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Kenneth Mark Bryden, Steven M. Corns, Justin Schonfeld
2006	B	`conf`	Changes in Prisoner's Dilemma Strategies Over Evolutionary Time With Different Population Sizes. IEEE Congress on Evolutionary Computation Wendy Ashlock, Daniel A. Ashlock
2006	B	`conf`	Evaluating Distance Measures for RNA Motif Search. IEEE Congress on Evolutionary Computation Justin Schonfeld, Daniel A. Ashlock
2006	B	`conf`	Evolutionary Exploration of the Mandelbrot Set. IEEE Congress on Evolutionary Computation Daniel A. Ashlock
2006	—	`book`	Evolutionary computation for modeling and optimization. Daniel A. Ashlock
2006	B	`conf`	Evolving A Diverse Collection of Robot Path Planning Problems. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Theodore W. Manikas, Kaveh Ashenayi
2006	B	`conf`	Generalized Thermal Agents with Multiple Boundary Conditions and Three-Dimensional Thermal Agents. IEEE Congress on Evolutionary Computation Stephen P. Gent, Daniel A. Ashlock, Allan R. Willms, Kenneth M. Bryden
2006	J	`jnl`	Graph-based evolutionary algorithms. IEEE Trans. Evol. Comput. Kenneth Mark Bryden, Daniel A. Ashlock, Steven M. Corns, Stephen J. Willson
2006	—	`conf`	Grid-Robot Drivers: an Evolutionary Multi-agent Virtual Robotics Task. CIG Daniel A. Ashlock
2006	B	`conf`	Improving Design Diversity Using Graph Based Evolutionary Algorithms. IEEE Congress on Evolutionary Computation Steven M. Corns, Daniel A. Ashlock, Douglas S. McCorkle, Kenneth Mark Bryden
2006	B	`conf`	Non-photorealistic Rendering of Images as Evolutionary Stained Glass. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Balu Karthikeyan, Kenneth M. Bryden
2006	B	`conf`	Simultaneous Evolution of Bracketed L-system Rules and Interpretation. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Kenneth M. Bryden, Stephen P. Gent
2005	C	`conf`	A Novel Variation Operator for More Rapid Evolution of DNA Error Correcting Codes. CIBCB Daniel A. Ashlock, Sheridan K. Houghten
2005	J	`jnl`	A hybrid genetic programming approach for the analytical solution of differential equations. Int. J. Gen. Syst. Steven J. Kirstukas, Kenneth M. Bryden, Daniel A. Ashlock
2005	A	`conf`	A study of evolutionary robustness in stochastically tiled polyominos. GECCO Justin Schonfeld, Daniel A. Ashlock
2005	C	`conf`	Depth Annotation of RNA Folds for Secondary Structure Motif Search. CIBCB Daniel A. Ashlock, Justin Schonfeld
2005	B	`conf`	Evolution of L-systems for compact virtual landscape generation. Congress on Evolutionary Computation Daniel A. Ashlock, Stephen P. Gent, Kenneth Mark Bryden
2005	B	`conf`	Graph based evolutionary algorithms enhance the identification of Steiner systems. Congress on Evolutionary Computation Daniel A. Ashlock, Kenneth Mark Bryden, Steven M. Corns
2005	B	`conf`	Non-local adaptation of artificial predators and prey. Congress on Evolutionary Computation Daniel A. Ashlock, Adam Sherk
2005	B	`conf`	On the effects of representation on evolving grid robots. Congress on Evolutionary Computation Steven M. Corns, Daniel A. Ashlock, Kenneth Mark Bryden, David Muth Jr.
2005	B	`conf`	Rapid training of thermal agents with single parent genetic programming. Congress on Evolutionary Computation Daniel A. Ashlock, Kenneth Mark Bryden, Wendy Ashlock, Stephen P. Gent
2005	C	`conf`	Selection of Genetically Diverse Recombinant Inbreds with an Ordered Gene Evolutionary Algorithm. CIBCB Daniel A. Ashlock, Ruth Swanson, Patrick S. Schnable
2005	B	`conf`	Solution transfer rates in graph based evolutionary algorithms. Congress on Evolutionary Computation Steven M. Corns, Kenneth Mark Bryden, Daniel A. Ashlock
2005	A	`conf`	The impact of cellular representation on finite state agents for prisoner's dilemma. GECCO Daniel A. Ashlock, Eun-Youn Kim
2005	J	`jnl`	Using the biological taxonomy to access biological literature with PathBinderH. Bioinform. Jing Ding, Karthikeyan Viswanathan, Daniel Berleant, Laron M. Hughes, Eve Syrkin Wurtele, Daniel A. Ashlock, Julie A. Dickerson, Andy W. Fulmer, Patrick S. Schnable
2004	C	`conf`	A comparison of evolved finite state classifiers and interpolated Markov models for improving PCR primer design. CIBCB Daniel A. Ashlock, Scott J. Emrich, Kenneth Mark Bryden, Steven M. Corns, Tsui-Jung Wen, Patrick S. Schnable
2004	B	`conf`	A comparison of the robustness of evolutionary computation and random walks. IEEE Congress on Evolutionary Computation Justin Schonfeld, Daniel A. Ashlock
2004	J	`jnl`	A strategy for assembling the maize (Zea mays L.) genome. Bioinform. Scott J. Emrich, Srinivas Aluru, Yan Fu, Tsui-Jung Wen, Mahesh Narayanan, Ling Guo, Daniel A. Ashlock, Patrick S. Schnable
2004	B	`conf`	An application of graph based evolutionary algorithms for diversity preservation. IEEE Congress on Evolutionary Computation Kenneth M. Bryden, Daniel A. Ashlock, Douglas S. McCorkle
2004	B	`conf`	Quantitative trait loci based solution of an inverse radiation heat transfer problem. IEEE Congress on Evolutionary Computation Sunil Suram, Kenneth M. Bryden, Daniel A. Ashlock
2003	B	`conf`	Thermal agents: an application of genetic programming to virtual engineering. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Kenneth M. Bryden
2002	B	`conf`	Greedy closure evolutionary algorithms. IEEE Congress on Evolutionary Computation Daniel A. Ashlock, Ling Guo, Fang Qiu
1999	B	`conf`	Texture synthesis with tandem genetic algorithms using nonparametric partially ordered Markov models. CEC Daniel A. Ashlock, Jennifer L. Davidson