Dan He - RankMe

46 papers A* 3A 2B 4C 2Misc 3Journal 20Unranked 11

Year	Rank	Type	Title / Venue / Authors
2018	J	`jnl`	Efficient algorithms for polyploid haplotype phasing. BMC Genom. Dan He, Subrata Saha, Richard Finkers, Laxmi Parida
2017	J	`jnl`	IPED2: Inheritance Path Based Pedigree Reconstruction Algorithm for Complicated Pedigrees. IEEE ACM Trans. Comput. Biol. Bioinform. Dan He, Zhanyong Wang, Laxmi Parida, Eleazar Eskin
2017	Misc	`conf`	MUSE: A Multi-locus Sampling-based Epistasis Algorithm for Quantitative Genetic Trait Prediction. PSB Dan He, Laxmi Parida
2016	J	`jnl`	Does encoding matter? A novel view on the quantitative genetic trait prediction problem. BMC Bioinform. Dan He, Laxmi Parida
2016	J	`jnl`	MINT: Mutual Information Based Transductive Feature Selection for Genetic Trait Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. Dan He, Irina Rish, David Haws, Laxmi Parida
2016	J	`jnl`	Novel applications of multitask learning and multiple output regression to multiple genetic trait prediction. Bioinform. Dan He, David Kuhn, Laxmi Parida
2015	J	`jnl`	Data-driven encoding for quantitative genetic trait prediction. BMC Bioinform. Dan He, Zhanyong Wang, Laxmi Parida
2015	—	`conf`	Does encoding matter? A novel view on the quantitative genetic trait prediction problem. BIBM Dan He, Laxmi Parida
2015	—	`conf`	MINED: An Efficient Mutual Information Based Epistasis Detection Method to Improve Quantitative Genetic Trait Prediction. ISBRA Dan He, Zhanyong Wang, Laxmi Parida
2015	J	`jnl`	Pattern matching with wildcards and length constraints using maximum network flow. J. Discrete Algorithms Abdullah N. Arslan, Dan He, Yu He, Xindong Wu
2015	—	`conf`	Performance evaluation of different encoding strategies for quantitative genetic trait prediction. ICCABS Oyetunji E. Ogundijo, Dan He, Laxmi Parida
2015	—	`conf`	SAME: a sampling-based multi-locus epistasis algorithm for quantitative genetic trait prediction. BCB Dan He, Laxmi Parida
2014	J	`jnl`	IPED2: Inheritance Path based Pedigree Reconstruction Algorithm for Complicated Pedigrees. CoRR Dan He, Zhanyong Wang, Laxmi Parida, Eleazar Eskin
2014	—	`conf`	IPED2: inheritance path based pedigree reconstruction algorithm for complicated pedigrees. BCB Dan He, Zhanyong Wang, Laxmi Parida, Eleazar Eskin
2014	J	`jnl`	IPED2X: A robust pedigree reconstruction algorithm for complicated pedigrees. J. Bioinform. Comput. Biol. Dan He, Eleazar Eskin
2014	J	`jnl`	SemInf: A Burst-Based Semantic Influence Model for Biomedical Topic Influence. IEEE J. Biomed. Health Informatics Dan He, Douglas Stott Parker Jr.
2014	A	`conf`	Transductive HSIC Lasso. SDM Dan He, Irina Rish, Laxmi Parida
2013	J	`jnl`	Hap-seq: An Optimal Algorithm for Haplotype Phasing with Imputation Using Sequencing Data. J. Comput. Biol. Dan He, Buhm Han, Eleazar Eskin
2013	B	`conf`	IPED: Inheritance Path Based Pedigree Reconstruction Algorithm Using Genotype Data. RECOMB Dan He, Zhanyong Wang, Buhm Han, Laxmi Parida, Eleazar Eskin
2013	J	`jnl`	IPED: Inheritance Path-based Pedigree Reconstruction Algorithm Using Genotype Data. J. Comput. Biol. Dan He, Zhanyong Wang, Buhm Han, Laxmi Parida, Eleazar Eskin
2013	—	`conf`	IPEDX: An exact algorithm for pedigree reconstruction using genotype data. BIBM Dan He, Eleazar Eskin
2013	J	`jnl`	Leveraging reads that span multiple single nucleotide polymorphisms for haplotype inference from sequencing data. Bioinform. Wen-Yun Yang, Farhad Hormozdiari, Zhanyong Wang, Dan He, Bogdan Pasaniuc, Eleazar Eskin
2013	J	`jnl`	MINT: Mutual Information based Transductive Feature Selection for Genetic Trait Prediction. CoRR Dan He, Irina Rish, David Haws, Simon Teyssedre, Zivan Karaman, Laxmi Parida
2013	Misc	`conf`	Optimized retrieval algorithms for personalized content aggregation. IRI Dan He, Douglas Stott Parker Jr.
2013	A	`conf`	SemInf: A Burst-based Semantic Influence Model for Biomedical Topic Influence. SDM Dan He, Douglas Stott Parker Jr.
2012	—	`—`	Efficient Algorithms for Human Genetic Variation Detection using High-throughput Sequencing Techniques. Dan He
2012	B	`conf`	Hap-seq: An Optimal Algorithm for Haplotype Phasing with Imputation Using Sequencing Data. RECOMB Dan He, Buhm Han, Eleazar Eskin
2011	J	`jnl`	CLAP: Collaborative pattern mining for distributed information systems. Decis. Support Syst. Xingquan Zhu, Bin Li, Xindong Wu, Dan He, Chengqi Zhang
2011	J	`jnl`	Efficient algorithms for tandem copy number variation reconstruction in repeat-rich regions. Bioinform. Dan He, Farhad Hormozdiari, Nicholas A. Furlotte, Eleazar Eskin
2011	J	`jnl`	Genotyping common and rare variation using overlapping pool sequencing. BMC Bioinform. Dan He, Noah Zaitlen, Bogdan Pasaniuc, Eleazar Eskin, Eran Halperin
2011	A*	`conf`	How Does Research Evolve? Pattern Mining for Research Meme Cycles. ICDM Dan He, Xingquan Zhu, Douglas Stott Parker Jr.
2011	—	`conf`	Learning the Funding Momentum of Research Projects. PAKDD (2) Dan He, Douglas Stott Parker Jr.
2011	J	`jnl`	Mining Approximate Repeating Patterns from Sequence Data with Gap Constraints. Comput. Intell. Dan He, Xingquan Zhu, Xindong Wu
2011	—	`conf`	Mining Research Topic-Related Influence between Academia and Industry. ECML/PKDD (2) Dan He
2011	—	`conf`	Using HLA binding prediction algorithms for epitope mapping in HIV vaccine clinical trials. BCB Dan He, Pratima Kunwar, Eleazar Eskin, Helen Horton, Peter B. Gilbert, Tomer Hertz
2010	J	`jnl`	Detection and reconstruction of tandemly organized de novo copy number variations. BMC Bioinform. Dan He, Nicholas A. Furlotte, Eleazar Eskin
2010	C	`conf`	Effective Algorithms for Fusion Gene Detection. WABI Dan He, Eleazar Eskin
2010	J	`jnl`	Optimal algorithms for haplotype assembly from whole-genome sequence data. Bioinform. Dan He, Arthur Choi, Knot Pipatsrisawat, Adnan Darwiche, Eleazar Eskin
2010	—	`conf`	Rule Synthesizing from Multiple Related Databases. PAKDD (2) Dan He, Xindong Wu, Xingquan Zhu
2010	A*	`conf`	Topic dynamics: an alternative model of bursts in streams of topics. KDD Dan He, Douglas Stott Parker Jr.
2009	B	`conf`	Approximate Repeating Pattern Mining with Gap Requirements. ICTAI Dan He, Xingquan Zhu, Xindong Wu
2009	B	`conf`	Error Detection and Uncertainty Modeling for Imprecise Data. ICTAI Dan He, Xingquan Zhu, Xindong Wu
2008	A*	`conf`	Cleansing Noisy Data Streams. ICDM Xingquan Zhu, Peng Zhang, Xindong Wu, Dan He, Chengqi Zhang, Yong Shi
2007	C	`conf`	Iterative Refinement of Repeat Sequence Specification Using Constrained Pattern Matching. BIBE Dan He, Abdullah N. Arslan, Yu He, Xindong Wu
2007	—	`conf`	SAIL-APPROX: An Efficient On-Line Algorithm for Approximate Pattern Matching with Wildcards and Length Constraints. BIBM Dan He, Xindong Wu, Xingquan Zhu
2006	Misc	`conf`	Ontology-based feature weighting for biomedical literature classification. IRI Dan He, Xindong Wu