Daming Zhu - RankMe

156 papers B 9C 9Misc 14Journal 71Unranked 52

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	A Randomized FPT Approximation Algorithm for Sorting Unsigned Genomes by Translocations: Breaking the 1.375 Approximation Barrier. COCOON (1) Chengcheng Sun, Haitao Jiang, Guojun Li, Daming Zhu
2025	—	`conf`	Enough Consecutive Matches in k-Tuple Common Substrings. ICIC (26) Tiantian Li, Siqi Jiang, Haitao Jiang, Lianrong Pu, Haodi Feng, Xuefeng Cui, Lizhen Cui, Daming Zhu
2025	—	`conf`	Finding a Set of Long Common Substrings with Repeats from m Input Strings. IJTCS-FAW Tiantian Li, Lusheng Wang, Daming Zhu
2025	J	`jnl`	Flanked Transposition Distance for Two Strings. IEEE Trans. Comput. Biol. Bioinform. Huixiu Xu, Xin Tong, Haitao Jiang, Lusheng Wang, Binhai Zhu, Daming Zhu
2025	—	`conf`	Improved Approximation Algorithm and Hardness Result for Sorting Unsigned Strings by Symmetric Reversals. COCOON (2) Wenfeng Lai, Haitao Jiang, Daming Zhu, Binhai Zhu
2025	—	`conf`	Longest Double-Bounded (k]-Tuple Common Substrings. COCOON (2) Tiantian Li, Siqi Jiang, Haitao Jiang, Daming Zhu
2025	—	`conf`	VirB: A Virus Hierarchical Classification Method Based on ModernBERT. ICIC (26) Haizhen Huang, Haodi Feng, Daming Zhu
2024	J	`jnl`	1DCAE-TSSAMC: Two-Stage Multi-Dimensional Spatial Features Based Multi-View Deep Clustering for Time Series Data. Int. J. Uncertain. Fuzziness Knowl. Based Syst. Jianglong Chen, Weiwei Song, Xiaoqing Zuo, Kang Zhao, Baoxuan Jin, Daming Zhu, Bolan Dai
2024	J	`jnl`	Accuracy Assessment of Geometric-Distortion Identification Methods for Sentinel-1 Synthetic Aperture Radar Imagery in Highland Mountainous Regions. Sensors Chao Shi, Xiaoqing Zuo, Jianming Zhang, Daming Zhu, Yongfa Li, Jinwei Bu
2024	—	`conf`	Can the 1.375 Approximation Ratio of Unsigned Genomes Distances be Improved? COCOON (1) Chengcheng Sun, Haitao Jiang, Lusheng Wang, Daming Zhu
2024	—	`conf`	FOKHic: A Framework of ${\varvec{k}}$-mer Based Hierarchical Classification. ICIC (LNAI 6) Yu Zhang, Yang Zhou, Haodi Feng, Daming Zhu
2024	J	`jnl`	Flanked Block-Interchange Distance on Strings. IEEE ACM Trans. Comput. Biol. Bioinform. Tiantian Li, Haitao Jiang, Binhai Zhu, Lusheng Wang, Daming Zhu
2024	—	`conf`	How to Integrate Non-Sequence Features for Peptide Collision Cross Section Prediction with Deep Learning? BIBM Zhimeng Tian, Zizheng Nie, Yong Zhang, Daming Zhu, Xuefeng Cui
2024	—	`conf`	Longest (k]-Tuple Common Substrings. IJTCS-FAW Tiantian Li, Haitao Jiang, Lusheng Wang, Daming Zhu
2024	J	`jnl`	New approximation algorithms for RNA secondary structures prediction problems by local search. Theor. Comput. Sci. Aizhong Zhou, Haodi Feng, Jiong Guo, Haitao Jiang, Nan Liu, Binhai Zhu, Daming Zhu
2024	—	`conf`	On Sorting Signed Permutations by Flanked DCJs. COCOON (1) Xin Tong, Haitao Jiang, Daming Zhu, Lianrong Pu
2024	—	`conf`	On Sorting by Unsigned Symmetric Reversals. COCOON (1) Wenfeng Lai, Haitao Jiang, Daming Zhu, Binhai Zhu
2024	—	`conf`	ULTR-asm: assembly of ultra long tandem repeat. BIBM Xiaolin Li, Lianrong Pu, Kuanqiang Tang, Xianzhong Feng, Daming Zhu
2023	—	`conf`	Cabbage Can't Always Be Transformed into Turnip: Decision Algorithms for Sorting by Symmetric Reversals. COCOON (2) Xin Tong, Yixiao Yu, Ziyi Fang, Haitao Jiang, Lusheng Wang, Binhai Zhu, Daming Zhu
2023	J	`jnl`	ContactLib-ATT: A Structure-Based Search Engine for Homologous Proteins. IEEE ACM Trans. Comput. Biol. Bioinform. Cheng Chen, Yuguo Zha, Daming Zhu, Kang Ning, Xuefeng Cui
2023	—	`conf`	De Novo Molecular Structure Generation from Mass Spectra. BIBM Yanmin Liu, Xuan Zhang, Wei Zhao, Daming Zhu, Xuefeng Cui
2023	—	`conf`	Improved Approximation Algorithms for Sorting Unsigned Genomes by Reversals. BIBM Chengcheng Sun, Haitao Jiang, Daming Zhu
2023	—	`conf`	Longest Order Conserved Repetition-free Subsequences. BIBM Shu Zhang, Qichen Wang, Daming Zhu, Haitao Jiang
2023	J	`jnl`	Men Can't Always be Transformed into Mice: Decision Algorithms and Complexity for Sorting by Symmetric Reversals. CoRR Xin Tong, Yixiao Yu, Ziyi Fang, Haitao Jiang, Lusheng Wang, Binhai Zhu, Daming Zhu
2023	—	`conf`	Minimize Maximum Coverage of Fragment Alignment Selection. BIBM Yuyang Wang, Haitao Jiang, Haodi Feng, Daming Zhu
2023	—	`conf`	On Sorting by Flanked Transpositions. ISBRA Huixiu Xu, Xin Tong, Haitao Jiang, Lusheng Wang, Binhai Zhu, Daming Zhu
2022	J	`jnl`	Algorithms and Hardness for Scaffold Filling to Maximize Increased Duo-Preservations. IEEE ACM Trans. Comput. Biol. Bioinform. Jingjing Ma, Haitao Jiang, Daming Zhu, Runmin Yang
2022	J	`jnl`	Approximation algorithms for sorting by bounded singleton moves. Theor. Comput. Sci. Shengjun Xie, Haodi Feng, Haitao Jiang, Daming Zhu
2022	—	`conf`	DLmeta: a deep learning method for metagenomic identification. BIBM Yu Zhang, Chenchen Li, Haodi Feng, Daming Zhu
2022	J	`jnl`	Identification and Analysis of Landslides in the Ahai Reservoir Area of the Jinsha River Basin Using a Combination of DS-InSAR, Optical Images, and Field Surveys. Remote. Sens. Yongfa Li, Xiaoqing Zuo, Daming Zhu, Wenhao Wu, Xu Yang, Shipeng Guo, Chao Shi, Cheng Huang, Fang Li, Xinyu Liu
2022	—	`conf`	Longest k-tuple Common Sub-Strings. BIBM Tiantian Li, Daming Zhu, Haitao Jiang, Haodi Feng, Xuefeng Cui
2022	J	`jnl`	MultiTrans: An Algorithm for Path Extraction Through Mixed Integer Linear Programming for Transcriptome Assembly. IEEE ACM Trans. Comput. Biol. Bioinform. Jin Zhao, Haodi Feng, Daming Zhu, Yu Lin
2022	—	`conf`	Predicting Algorithm of Transcription Factor Binding Sites Based on Weighted Multi-Grained Scanning. BIBM Zhendong Liu, Dongyan Li, Xi Chen, Xinrong Lv, Daming Zhu, Xiaofeng Li
2022	—	`conf`	Prediction Algorithm of DNA Sites Based on Weighted Feature Matrix. BIBM Zhendong Liu, Xi Chen, Dongyan Li, Xinrong Lv, Daming Zhu, Xiaofeng Li
2022	—	`conf`	Pretraining Transformers for TCR-pMHC Binding Prediction. BIBM Jinsheng Shang, Qihong Jiao, Cheng Chen, Daming Zhu, Xuefeng Cui
2022	J	`jnl`	mzMD: visualization-oriented MS data storage and retrieval. Bioinform. Runmin Yang, Jingjing Ma, Shu Zhang, Yu Zheng, Lusheng Wang, Daming Zhu
2021	J	`jnl`	A 43-approximation algorithm for the Maximum Internal Spanning Tree Problem. J. Comput. Syst. Sci. Xingfu Li, Daming Zhu, Lusheng Wang
2021	J	`jnl`	Approximation algorithms for the maximum vertex coverage problem on bounded degree graphs. Theor. Comput. Sci. Peiyan Zhou, Haitao Jiang, Daming Zhu, Binhai Zhu
2021	J	`jnl`	Estimation of Salinity Content in Different Saline-Alkali Zones Based on Machine Learning Model Using FOD Pretreatment Method. Remote. Sens. Chengbiao Fu, Anhong Tian, Daming Zhu, Junsan Zhao, Heigang Xiong
2021	—	`conf`	Hydrogen bonds meet self-attention: all you need for protein structure embedding. BIBM Cheng Chen, Yuguo Zha, Daming Zhu, Kang Ning, Xuefeng Cui
2021	J	`jnl`	Hyperspectral Prediction of Soil Total Salt Content by Different Disturbance Degree under a Fractional-Order Differential Model with Differing Spectral Transformations. Remote. Sens. Anhong Tian, Junsan Zhao, Bo-Hui Tang, Daming Zhu, Chengbiao Fu, Heigang Xiong
2021	J	`jnl`	On the solution bound of two-sided scaffold filling. Theor. Comput. Sci. Jingjing Ma, Daming Zhu, Haitao Jiang, Binhai Zhu
2021	J	`jnl`	SVLR: Genome Structural Variant Detection Using Long-Read Sequencing Data. J. Comput. Biol. Wenyan Gu, Aizhong Zhou, Lusheng Wang, Shiwei Sun, Xuefeng Cui, Daming Zhu
2021	J	`jnl`	Sorting a Permutation by Best Short Swaps. Algorithmica Shu Zhang, Daming Zhu, Haitao Jiang, Jiong Guo, Haodi Feng, Xiaowen Liu
2021	J	`jnl`	Study on the Pretreatment of Soil Hyperspectral and Na+ Ion Data under Different Degrees of Human Activity Stress by Fractional-Order Derivatives. Remote. Sens. Anhong Tian, Junsan Zhao, Bo-Hui Tang, Daming Zhu, Chengbiao Fu, Heigang Xiong
2021	—	`conf`	TransCoord: Genome-guided Transcripts Assembly by Coordinating Candidate Paths into Two-phased Linear Programming. BIBM Chenchen Li, Jin Zhao, Haodi Feng, Daming Zhu
2021	—	`conf`	mzMD: A New Storage and Retrieval System for Mass Spectrometry Data. ICIC (3) Runmin Yang, Jingjing Ma, Shu Zhang, Yu Zheng, Lusheng Wang, Daming Zhu
2021	—	`conf`	rzMLP-DTA: gMLP network with ReZero for sequence-based drug-target affinity prediction. BIBM Zongzhao Qiu, Qihong Jiao, Yuxiao Wang, Cheng Chen, Daming Zhu, Xuefeng Cui
2020	J	`jnl`	A 1.375-approximation algorithm for unsigned translocation sorting. J. Comput. Syst. Sci. Lianrong Pu, Daming Zhu, Haitao Jiang
2020	J	`jnl`	Corrections to "IsoTree: A New Framework for de novo Transcriptome Assembly from RNA-seq Reads". IEEE ACM Trans. Comput. Biol. Bioinform. Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu
2020	J	`jnl`	Improved detection algorithm for copy number variations based on hidden Markov model. Multim. Tools Appl. Hai Yang, Daming Zhu
2020	J	`jnl`	IsoTree: A New Framework for de novo Transcriptome Assembly from RNA-seq Reads. IEEE ACM Trans. Comput. Biol. Bioinform. Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu
2020	J	`jnl`	Maximum Stacking Base Pairs: Hardness and Approximation by Nonlinear Linear Programming-Rounding. J. Comput. Biol. Lixin Liu, Haitao Jiang, Peiqiang Liu, Binhai Zhu, Daming Zhu
2020	J	`jnl`	PASA: Identifying More Credible Structural Variants of Hedou12. IEEE ACM Trans. Comput. Biol. Bioinform. Huiqiang Jia, Haichao Wei, Daming Zhu, Jingjing Ma, Hai Yang, Ruizhi Wang, Xianzhong Feng
2020	—	`conf`	SVLR: Genome Structure Variant Detection Using Long Read Sequencing Data. ISBRA Wenyan Gu, Aizhong Zhou, Lusheng Wang, Shiwei Sun, Xuefeng Cui, Daming Zhu
2019	B	`conf`	A 2-Approximation Algorithm for the Complementary Maximal Strip Recovery Problem. CPM Haitao Jiang, Jiong Guo, Daming Zhu, Binhai Zhu
2019	Misc	`conf`	An Approximation Algorithm for Sorting by Bounded Singleton Moves. COCOON Shengjun Xie, Haodi Feng, Haitao Jiang, Junfeng Luan, Daming Zhu
2019	J	`jnl`	An approximation algorithm for genome sorting by reversals to recover all adjacencies. J. Comb. Optim. Shanshan Zhai, Peng Zhang, Daming Zhu, Weitian Tong, Yao Xu, Guohui Lin
2019	J	`jnl`	Combinatorial Detection Algorithm for Copy Number Variations Using High-throughput Sequencing Reads. Int. J. Pattern Recognit. Artif. Intell. Hai Yang, Daming Zhu
2019	J	`jnl`	DTA-SiST: de novo transcriptome assembly by using simplified suffix trees. BMC Bioinform. Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu
2019	J	`jnl`	Improved predicting algorithm of RNA pseudoknotted structure. Int. J. Comput. Sci. Eng. Zhendong Liu, Daming Zhu, Qionghai Dai
2019	—	`conf`	Maximum Stacking Base Pairs: Hardness and Approximation by Nonlinear LP-Rounding. ISBRA Lixin Liu, Haitao Jiang, Peiqiang Liu, Binhai Zhu, Daming Zhu
2018	J	`jnl`	A 2-approximation algorithm for the contig-based genomic scaffold filling problem. J. Bioinform. Comput. Biol. Haitao Jiang, Letu Qingge, Daming Zhu, Binhai Zhu
2018	J	`jnl`	Can a breakpoint graph be decomposed into none other than 2-cycles? Theor. Comput. Sci. Lianrong Pu, Yu Lin, Daming Zhu, Haitao Jiang
2018	B	`conf`	Can a permutation be sorted by best short swaps?. CPM Shu Zhang, Daming Zhu, Haitao Jiang, Jingjing Ma, Jiong Guo, Haodi Feng
2018	Misc	`ed.`	Computing and Combinatorics - 24th International Conference, COCOON 2018, Qing Dao, China, July 2-4, 2018, Proceedings COCOON Lusheng Wang, Daming Zhu
2018	—	`conf`	DTAST: A Novel Radical Framework for de Novo Transcriptome Assembly Based on Suffix Trees. ICIC (1) Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu
2018	—	`conf`	Improved Indel Detection Algorithm Based on Split-Read and Read-Depth. ICIC (3) Hai Yang, Daming Zhu, Huiqiang Jia
2018	—	`conf`	PASA: Identifying More Credible Structural Variants of Hedou12. ICIC (1) Huiqiang Jia, Haichao Wei, Daming Zhu, Ruizhi Wang, Haodi Feng, Xiangzhong Feng
2018	J	`jnl`	Predicting Model and Algorithm in RNA Folding Structure Including Pseudoknots. Int. J. Pattern Recognit. Artif. Intell. Zhendong Liu, Daming Zhu, Qionghai Dai
2018	J	`jnl`	Preface. Theor. Comput. Sci. Daming Zhu, Sergey Bereg
2018	—	`conf`	The Longest Common Exemplar Subsequence Problem. BIBM Shu Zhang, Ruizhi Wang, Daming Zhu, Haitao Jiang, Haodi Feng, Jiong Guo, Xiaowen Liu
2017	Misc	`conf`	A 1.4-Approximation Algorithm for Two-Sided Scaffold Filling. FAW Jingjing Ma, Haitao Jiang, Daming Zhu, Shu Zhang
2017	—	`conf`	A New Approximation Algorithm for the Maximum Stacking Base Pairs Problem from RNA Secondary Structures Prediction. COCOA (1) Aizhong Zhou, Haitao Jiang, Jiong Guo, Daming Zhu
2017	—	`conf`	A spectrum graph-based protein sequence filtering algorithm for proteoform identification by top-down mass spectrometry. BIBM Runmin Yang, Daming Zhu, Qiang Kou, Poornima Bhat-Nakshatri, Harikrishna Nakshatri, Si Wu, Xiaowen Liu
2017	J	`jnl`	Approximating Max NAE-k-SAT by anonymous local search. Theor. Comput. Sci. Aiyong Xian, Kaiyuan Zhu, Daming Zhu, Lianrong Pu, Hong Liu
2017	J	`jnl`	Improved algorithms for intermediate dataset storage in a cloud-based dataflow. Theor. Comput. Sci. Jie Cheng, Daming Zhu, Binhai Zhu
2017	—	`conf`	IsoTree: De Novo Transcriptome Assembly from RNA-Seq Reads - (Extended Abstract). ISBRA Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu
2016	J	`jnl`	A 1.5-Approximation Algorithm for Two-Sided Scaffold Filling. Algorithmica Nan Liu, Daming Zhu, Haitao Jiang, Binhai Zhu
2016	C	`conf`	A New Approximation Algorithm for Unsigned Translocation Sorting. WABI Lianrong Pu, Daming Zhu, Haitao Jiang
2016	Misc	`ed.`	Frontiers in Algorithmics, 10th International Workshop, FAW 2016, Qingdao, China, June 30- July 2, 2016, Proceedings FAW Daming Zhu, Sergey Bereg
2016	B	`conf`	Genomic Scaffold Filling Revisited. CPM Haitao Jiang, Chenglin Fan, Boting Yang, Farong Zhong, Daming Zhu, Binhai Zhu
2016	—	`conf`	Mining structural variants of Heduo12 using paired-end reads. BIBM Huiqiang Jia, Haicho Wei, Daming Zhu, Jingjing Ma, Hai Yang, Ruizhi Wang, Xianzhong Feng
2015	J	`jnl`	A Dynamic Programming Algorithm For (1, 2)-Exemplar Breakpoint Distance. J. Comput. Biol. Zhexue Wei, Daming Zhu, Lusheng Wang
2015	Misc	`conf`	A New Algorithm for Intermediate Dataset Storage in a Cloud-Based Dataflow. FAW Jie Cheng, Daming Zhu, Binhai Zhu
2015	J	`jnl`	A factor-(1.408 + ε) approximation for sorting unsigned genomes by reciprocal translocations. Theor. Comput. Sci. Haitao Jiang, Lusheng Wang, Binhai Zhu, Daming Zhu
2015	Misc	`conf`	Approximation and Nonapproximability for the One-Sided Scaffold Filling Problem. COCOON Haitao Jiang, Jingjing Ma, Junfeng Luan, Daming Zhu
2015	J	`jnl`	Isomorphism and similarity for 2-generation pedigrees. BMC Bioinform. Haitao Jiang, Guohui Lin, Weitian Tong, Daming Zhu, Binhai Zhu
2015	Misc	`conf`	Local Search to Approximate Max NAE- k k -Sat Tightly. FAW Aiyong Xian, Kaiyuan Zhu, Daming Zhu, Lianrong Pu
2015	C	`conf`	Predicting Algorithm of RNA Folding Structure with Pseudoknots. CIS Zhendong Liu, Daming Zhu, Qionghai Dai
2014	Misc	`conf`	A (1.408+ε)-Approximation Algorithm for Sorting Unsigned Genomes by Reciprocal Translocations. FAW Haitao Jiang, Lusheng Wang, Binhai Zhu, Daming Zhu
2014	J	`jnl`	A 4/3-approximation algorithm for finding a spanning tree to maximize its internal vertices. CoRR Xingfu Li, Daming Zhu
2014	—	`conf`	A parameterized algorithm for (1, 2)-exemplar breakpoint distance. BIBM Zhexue Wei, Daming Zhu, Lusheng Wang
2014	B	`conf`	An 5/4-Approximation Algorithm for Sorting Permutations by Short Block Moves. ISAAC Haitao Jiang, Haodi Feng, Daming Zhu
2014	B	`conf`	Approximating the Maximum Internal Spanning Tree Problem via a Maximum Path-Cycle Cover. ISAAC Xingfu Li, Daming Zhu
2014	J	`jnl`	Predicting scheme of RNA folding structure including pseudoknots. Int. J. Sens. Networks Zhendong Liu, Daming Zhu, Hongwei Ma
2013	—	`conf`	A Dynamic Programming Algorithm for Unsigned (1, 2)-Exemplar Breakpoint Distance Problem with Span Constraint. BIFE Zhexue Wei, Daming Zhu
2013	C	`conf`	An Approximation Scheme for RNA Folding Structure Prediction Including Pseudoknots. CIS Zhendong Liu, Daming Zhu, Wei Cui, Nan Liu
2013	J	`jnl`	An Exact Algorithm for the Zero Exemplar Breakpoint Distance Problem. IEEE ACM Trans. Comput. Biol. Bioinform. Daming Zhu, Lusheng Wang
2013	Misc	`conf`	An Improved Approximation Algorithm for Scaffold Filling to Maximize the Common Adjacencies. COCOON Nan Liu, Haitao Jiang, Daming Zhu, Binhai Zhu
2013	J	`jnl`	An Improved Approximation Algorithm for Scaffold Filling to Maximize the Common Adjacencies. IEEE ACM Trans. Comput. Biol. Bioinform. Nan Liu, Haitao Jiang, Daming Zhu, Binhai Zhu
2013	J	`jnl`	Complexity and Approximation Results for the Min-Sum and Min-Max Disjoint Paths Problems. Comput. Informatics Peng Zhang, Wenbo Zhao, Daming Zhu
2013	J	`jnl`	Implementing program extraction from CL1-proofs. CoRR Meixia Qu, Ke Chen, Daming Zhu, Junfeng Luan
2013	J	`jnl`	New Heuristic Algorithm of RNA Structure Prediction Including Pseudoknots. J. Comput. Zhendong Liu, Daming Zhu
2013	J	`jnl`	Parameterized complexity of control by voter selection in Maximin, Copeland, Borda, Bucklin, and Approval election systems. Theor. Comput. Sci. Hong Liu, Daming Zhu
2013	J	`jnl`	Sorting genomes by generalized translocations. Theor. Comput. Sci. Xiao Yin, Daming Zhu
2013	C	`conf`	The Algorithm for the Two-Sided Scaffold Filling Problem. TAMC Nan Liu, Daming Zhu
2013	—	`conf`	The Duplication-Loss Problem: Novel Algorithms Based on k-NNI Local Search. BIFE Hui Wang, Daming Zhu
2012	J	`jnl`	A (1+ε)-approximation algorithm for sorting by short block-moves. Theor. Comput. Sci. Haitao Jiang, Daming Zhu, Binhai Zhu
2012	J	`jnl`	A new approximation algorithm for cut-and-paste sorting of unsigned circular permutations. J. Comput. Syst. Sci. Xiaowen Lou, Daming Zhu
2012	J	`jnl`	An approximation algorithm for the Generalized k-Multicut problem. Discret. Appl. Math. Peng Zhang, Daming Zhu, Junfeng Luan
2012	—	`conf`	De Novo Peptide Sequencing Based on Vertex Contraction Algorithm. CSO Zhexue Wei, Daming Zhu
2012	J	`jnl`	Minimum common string partition revisited. J. Comb. Optim. Haitao Jiang, Binhai Zhu, Daming Zhu, Hong Zhu
2012	—	`conf`	On Editing Graphs into 2-Club Clusters. FAW-AAIM Hong Liu, Peng Zhang, Daming Zhu
2012	J	`jnl`	On the toggling-branching recurrence of Computability Logic CoRR Meixia Qu, Junfeng Luan, Daming Zhu
2012	J	`jnl`	Protein-protein binding site identification by enumerating the configurations. BMC Bioinform. Fei Guo, Shuai Cheng Li, Lusheng Wang, Daming Zhu
2011	J	`jnl`	A 14/11-approximation algorithm for sorting by short block-moves. Sci. China Inf. Sci. Haitao Jiang, Daming Zhu
2011	J	`jnl`	Algorithms for sorting unsigned linear genomes by the DCJ operations. Bioinform. Haitao Jiang, Binhai Zhu, Daming Zhu
2011	J	`jnl`	Analysis of the Hamming Weight of the Extended wmbNAF. IACR Cryptol. ePrint Arch. Ming Li, Ali Miri, Daming Zhu
2011	C	`conf`	New Heuristic Algorithm of RNA Secondary Structure Prediction with Pseudoknots. CIS Zhendong Liu, Zhijun Zhang, Zaixue Liu, Daming Zhu
2011	Misc	`conf`	Tight Bounds on Local Search to Approximate the Maximum Satisfiability Problems. COCOON Daming Zhu, Shaohan Ma, Pingping Zhang
2010	J	`jnl`	A predicting algorithm of RNA secondary structure based on stems. Kybernetes Zhendong Liu, Hengwu Li, Daming Zhu
2010	Misc	`conf`	Minimum Common String Partition Revisited. FAW Haitao Jiang, Binhai Zhu, Daming Zhu, Hong Zhu
2010	J	`jnl`	Parameterized complexity of control problems in Maximin election. Inf. Process. Lett. Hong Liu, Daming Zhu
2009	—	`conf`	A (1+e)-Approximation Algorithm for Sorting by Short Block-Moves. CSO (1) Haitao Jiang, Daming Zhu
2009	—	`conf`	A Bicriteria Approximation Algorithm for Generalized k-Multicut in Trees. CSO (2) Peng Zhang, Daming Zhu, Junfeng Luan
2009	—	`conf`	Parameterized Complexity of Finding Elementary Modes in Metabolic Networks. IJCBS Hong Liu, Haodi Feng, Daming Zhu
2009	J	`jnl`	Parameterized computational complexity of control problems in voting systems. Theor. Comput. Sci. Hong Liu, Haodi Feng, Daming Zhu, Junfeng Luan
2009	C	`conf`	Polynomial-Time Algorithm for Sorting by Generalized Translocations. TAMC Xiao Yin, Daming Zhu
2009	—	`conf`	Translocation-Deletions Distance Formula for Sorting Genomes. CSIE (4) Fanchang Hao, Junfeng Luan, Daming Zhu
2008	J	`jnl`	A (1.5 + epsilon)-Approximation Algorithm for Unsigned Translocation Distance. IEEE ACM Trans. Comput. Biol. Bioinform. Yun Cui, Lusheng Wang, Daming Zhu, Xiaowen Liu
2008	Misc	`conf`	A 2.25-Approximation Algorithm for Cut-and-Paste Sorting of Unsigned Circular Permutations. COCOON Xiaowen Lou, Daming Zhu
2008	J	`jnl`	A polynomial algorithm to compute the minimum degree spanning trees of directed acyclic graphs with applications to the broadcast problem. Discret. Math. Guohui Yao, Daming Zhu, Hengwu Li, Shaohan Ma
2008	—	`ch.`	DNA Encoding Methods in the Field of DNA Computing. Computational Intelligence in Bioinformatics Aili Han, Daming Zhu
2008	J	`jnl`	DNA solution based on sequence alignment to the Minimum Spanning Tree problem. Int. J. Bioinform. Res. Appl. Aili Han, Daming Zhu, Jingchang Pan
2008	C	`conf`	Genome Rearrangement Algorithms for Unsigned Permutations with O(logn) Singletons. TAMC Xiaowen Lou, Daming Zhu
2008	—	`conf`	New Evolutionary Subset: Application to Symbiotic Evolutionary Algorithm for Job-Shop Scheduling Problem. ICNC (1) Zhaofeng Su, Hongze Qiu, Daming Zhu, Haodi Feng
2008	J	`jnl`	On Constrained Facility Location Problems. J. Comput. Sci. Technol. Wei-Lin Li, Peng Zhang, Daming Zhu
2007	J	`jnl`	A 1.75-approximation algorithm for unsigned translocation distance. J. Comput. Syst. Sci. Yun Cui, Lusheng Wang, Daming Zhu
2007	—	`conf`	Algorithms for the Well-Drilling Layout Problem. ICIC (2) Aili Han, Daming Zhu, Shouqiang Wang, Meixia Qu
2007	J	`jnl`	Faster algorithms for sorting by transpositions and sorting by block interchanges. ACM Trans. Algorithms Jianxing Feng, Daming Zhu
2007	C	`conf`	Prediction of Protein Subcellular Locations by Combining K-Local Hyperplane Distance Nearest Neighbor. ADMA Hong Liu, Haodi Feng, Daming Zhu
2006	—	`conf`	A New DNA Encoding Method for Traveling Salesman Problem. ICIC (3) Aili Han, Daming Zhu
2006	—	`conf`	A New DNA-Based Approach to Solve the Maximum Weight Clique Problem. ICIC (3) Aili Han, Daming Zhu
2006	—	`conf`	Complexity Analysis for the HEWN Algorithm. ISDA (1) Aili Han, Daming Zhu
2006	Misc	`conf`	DNA Computing Model for the Minimum Spanning Tree Problem. SYNASC Aili Han, Daming Zhu
2006	B	`conf`	DNA Encoding Method of Weight for Chinese Postman Problem. IEEE Congress on Evolutionary Computation Aili Han, Daming Zhu
2006	C	`conf`	Faster Algorithms for Sorting by Transpositions and Sorting by Block-Interchanges. TAMC Jianxing Feng, Daming Zhu
2006	J	`jnl`	On the complexity of unsigned translocation distance. Theor. Comput. Sci. Daming Zhu, Lusheng Wang
2005	B	`conf`	A 1.75-Approximation Algorithm for Unsigned Translocation Distance. ISAAC Yun Cui, Lusheng Wang, Daming Zhu
2005	Misc	`conf`	A New Pseudoknots Folding Algorithm for RNA Structure Prediction. COCOON Hengwu Li, Daming Zhu
2005	J	`jnl`	An J. Comput. Syst. Sci. Lusheng Wang, Daming Zhu, Xiaowen Liu, Shaohan Ma
2005	B	`conf`	An O(N APBC Lusheng Wang, Daming Zhu, Xiaowen Liu, Shaohan Ma
2004	J	`jnl`	CTRD: a fast applet for computing signed translocation distance between genomes. Bioinform. Wangsen Feng, Lusheng Wang, Daming Zhu
2001	J	`jnl`	Hardness and Methods to Solve CLIQUE. J. Comput. Sci. Technol. Daming Zhu, Junfeng Luan, Shaohan Ma
1994	B	`conf`	Analysis of the Convergency of Topology Preserving Neural Networks on Learning. ISAAC Daming Zhu, Shaohan Ma, Hongze Qiu