Dagmar Iber

20 papers Misc 1Journal 18Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
PINNverse: Accurate parameter estimation in differential equations from noisy data with constrained physics-informed neural networks.
CoRR
Marius Almanstötter, Roman Vetter, Dagmar Iber
2024 J jnl
PolyHoop: Soft particle and tissue dynamics with topological transitions.
Comput. Phys. Commun.
Roman Vetter, Steve Runser, Dagmar Iber
2024 J jnl
Publisher Correction: SimuCell3D: three-dimensional simulation of tissue mechanics with cell polarization.
Nat. Comput. Sci.
Steve Runser, Roman Vetter, Dagmar Iber
2024 J jnl
SimuCell3D: three-dimensional simulation of tissue mechanics with cell polarization.
Nat. Comput. Sci.
Steve Runser, Roman Vetter, Dagmar Iber
2016 J jnl
A Model of the Spatio-temporal Dynamics of Drosophila Eye Disc Development.
PLoS Comput. Biol.
Patrick Fried, Máximo Sánchez-Aragón, Daniel Aguilar-Hidalgo, Birgitta Lehtinen, Fernando Casares, Dagmar Iber
2016 J jnl
Image-based modelling of organogenesis.
Briefings Bioinform.
Dagmar Iber, Zahra Karimaddini, Erkan Ünal
2016 J jnl
MOCCASIN: converting MATLAB ODE models to SBML.
Bioinform.
Harold F. Gómez, Michael Hucka, Sarah M. Keating, German Nudelman, Dagmar Iber, Stuart C. Sealfon
2016 J jnl
Simulating Organogenesis in COMSOL: Phase-Field Based Simulations of Embryonic Lung Branching Morphogenesis.
CoRR
Lucas Daniel Wittwer, Roberto Croce, Sebastian Aland, Dagmar Iber
2015 J jnl
Image-based Modelling of Organogenesis.
CoRR
Dagmar Iber, Zahra Karimaddini, Erkan Ünal
2015 J jnl
LBIBCell: a cell-based simulation environment for morphogenetic problems.
Bioinform.
Simon Tanaka, David Sichau, Dagmar Iber
2015 J jnl
Simulating Organogenesis: Algorithms for the Image-Based Determination of Displacement Fields.
ACM Trans. Model. Comput. Simul.
Clemens Arthur Schwaninger, Denis Menshykau, Dagmar Iber
2014 J jnl
Simulating Organogenesis in COMSOL: Image-based Modeling.
CoRR
Zahra Karimaddini, Erkan Unal, Denis Menshykau, Dagmar Iber
2013 J jnl
Computational modelling of bovine ovarian follicle development.
BMC Syst. Biol.
Dagmar Iber, Christian Geyter
2013 — conf
Dynamic Image-Based Modelling of Kidney Branching Morphogenesis.
CMSB
Srivathsan Adivarahan, Denis Menshykau, Odyssé Michos, Dagmar Iber
2012 J jnl
Branch Mode Selection during Early Lung Development.
PLoS Comput. Biol.
Denis Menshykau, Conradin Kraemer, Dagmar Iber
2012 J jnl
ECCB 2012: The 11
Bioinform.
Torsten Schwede, Dagmar Iber
2011 J jnl
Inferring Biological Mechanisms by Data-Based Mathematical Modelling: Compartment-Specific Gene Activation during Sporulation in
Adv. Bioinformatics
Dagmar Iber
2011 J jnl
The plasticity of TGF-β signaling.
BMC Syst. Biol.
Geraldine Cellière, Georgios Fengos, Marianne Hervé, Dagmar Iber
2010 Misc conf
Reduction of a detailed biological signaling model.
ICCS
Dagmar Iber
2005 J jnl
The Mechanistic Basis of Compartmentalized Gene Expression in
Nat. Comput.
Dagmar Iber