Cristian Bologa

31 papers Misc 1Journal 28Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
KG2ML: integrating knowledge graphs and positive unlabeled learning for identifying disease-associated genes.
Frontiers Bioinform.
Praveen Kumar, Vincent T. Metzger, Swastika T. Purushotham, Priyansh Kedia, Cristian Bologa, Christophe G. Lambert, Jeremy J. Yang
2025 J jnl
Badapple 2.0: An Empirical Predictor of Compound Promiscuity, Updated, Modernized, and Enhanced for Explainability.
J. Chem. Inf. Model.
John A. Ringer, Christophe G. Lambert, Steven B. Bradfute, Cristian Bologa, Jeremy J. Yang
2025 J jnl
Detecting Opioid Use Disorder in Health Claims Data With Positive Unlabeled Learning.
IEEE J. Biomed. Health Informatics
Praveen Kumar, Fariha Moomtaheen, Scott A. Malec, Jeremy J. Yang, Cristian Bologa, Kristan Alexander Schneider, Yiliang Zhu, Mauricio Tohen, Gerardo Villarreal, Douglas J. Perkins, Elliot M. Fielstein, Sharon E. Davis, Michael E. Matheny, Christophe G. Lambert
2024 J jnl
Correction: Exploring DrugCentral: from molecular structures to clinical effects.
J. Comput. Aided Mol. Des.
Liliana Halip, Sorin I. Avram, Ramona Curpan, Ana Borota, Alina Bora, Cristian Bologa, Tudor I. Oprea
2023 J jnl
DrugCentral 2023 extends human clinical data and integrates veterinary drugs.
Nucleic Acids Res.
Sorin I. Avram, Thomas B. Wilson, Ramona Curpan, Liliana Halip, Ana Borota, Alina Bora, Cristian Bologa, Jayme Holmes, Jeffrey Knockel, Jeremy J. Yang, Tudor I. Oprea
2023 J jnl
Exploring DrugCentral: from molecular structures to clinical effects.
J. Comput. Aided Mol. Des.
Liliana Halip, Sorin I. Avram, Ramona Curpan, Ana Borota, Alina Bora, Cristian Bologa, Tudor I. Oprea
2023 J jnl
Pharos 2023: an integrated resource for the understudied human proteome.
Nucleic Acids Res.
Keith J. Kelleher, Timothy Sheils, Stephen L. Mathias, Jeremy J. Yang, Vincent T. Metzger, Vishal B. Siramshetty, Dac-Trung Nguyen, Lars Juhl Jensen, Dusica Vidovic, Stephan C. Schürer, Jayme Holmes, Karlie R. Sharma, Ajay Pillai, Cristian Bologa, Jeremy S. Edwards, Ewy A. Mathé, Tudor I. Oprea
2021 J jnl
DrugCentral 2021 supports drug discovery and repositioning.
Nucleic Acids Res.
Sorin I. Avram, Cristian Bologa, Jayme Holmes, Giovanni Bocci, Thomas B. Wilson, Dac-Trung Nguyen, Ramona Curpan, Liliana Halip, Alina Bora, Jeremy J. Yang, Jeffrey Knockel, Suman Sirimulla, Oleg Ursu, Tudor I. Oprea
2021 J jnl
TCRD and Pharos 2021: mining the human proteome for disease biology.
Nucleic Acids Res.
Timothy Sheils, Stephen L. Mathias, Keith J. Kelleher, Vishal B. Siramshetty, Dac-Trung Nguyen, Cristian Bologa, Lars Juhl Jensen, Dusica Vidovic, Amar Koleti, Stephan C. Schürer, Anna Waller, Jeremy J. Yang, Jayme Holmes, Giovanni Bocci, Noel Southall, Poorva Dharkar, Ewy A. Mathé, Anton Simeonov, Tudor I. Oprea
2021 J jnl
TIGA: target illumination GWAS analytics.
Bioinform.
Jeremy J. Yang, Dhouha Grissa, Christophe G. Lambert, Cristian Bologa, Stephen L. Mathias, Anna Waller, David J. Wild, Lars Juhl Jensen, Tudor I. Oprea
2021 J jnl
XCOVNet: Chest X-ray Image Classification for COVID-19 Early Detection Using Convolutional Neural Networks.
New Gener. Comput.
Vishu Madaan, Aditya Roy, Charu Gupta, Prateek Agrawal, Anand Sharma, Cristian Bologa, Radu Prodan
2019 J jnl
DrugCentral 2018: an update.
Nucleic Acids Res.
Oleg Ursu, Jayme Holmes, Cristian Bologa, Jeremy J. Yang, Stephen L. Mathias, Vasileios Stathias, Dac-Trung Nguyen, Stephan C. Schürer, Tudor I. Oprea
2017 J jnl
Drug target ontology to classify and integrate drug discovery data.
J. Biomed. Semant.
Yu Lin, Saurabh Mehta, Hande Küçük-McGinty, John Paul Turner, Dusica Vidovic, Michele Forlin, Amar Koleti, Dac-Trung Nguyen, Lars Juhl Jensen, Rajarshi Guha, Stephen L. Mathias, Oleg Ursu, Vasileios Stathias, Jianbin Duan, Nooshin Nabizadeh, Caty Chung, Christopher Mader, Ubbo Visser, Jeremy J. Yang, Cristian Bologa, Tudor I. Oprea, Stephan C. Schürer
2017 J jnl
DrugCentral: online drug compendium.
Nucleic Acids Res.
Oleg Ursu, Jayme Holmes, Jeffrey Knockel, Cristian Bologa, Jeremy J. Yang, Stephen L. Mathias, Stuart J. Nelson, Tudor I. Oprea
2017 J jnl
Formalizing drug indications on the road to therapeutic intent.
J. Am. Medical Informatics Assoc.
Stuart J. Nelson, Tudor I. Oprea, Oleg Ursu, Cristian Bologa, Amrapali Zaveri, Jayme Holmes, Jeremy J. Yang, Stephen L. Mathias, Subramani Mani, Mark S. Tuttle, Michel Dumontier
2017 J jnl
Pharos: Collating protein information to shed light on the druggable genome.
Nucleic Acids Res.
Dac-Trung Nguyen, Stephen L. Mathias, Cristian Bologa, Søren Brunak, Nicolas F. Fernandez, Anna Gaulton, Anne Hersey, Jayme Holmes, Lars Juhl Jensen, Anneli Karlsson, Guixia Liu, Avi Ma'ayan, Geetha Mandava, Subramani Mani, Saurabh Mehta, John P. Overington, Juhee Patel, Andrew D. Rouillard, Stephan C. Schürer, Timothy Sheils, Anton Simeonov, Larry A. Sklar, Noel Southall, Oleg Ursu, Dusica Vidovic, Anna Waller, Jeremy J. Yang, Ajit Jadhav, Tudor I. Oprea, Rajarshi Guha
2017 J jnl
Protein biomarker druggability profiling.
J. Biomed. Informatics
Subramani Mani, Daniel Cannon, Robin Ohls, Tudor I. Oprea, Stephen L. Mathias, Karri Ballard, Oleg Ursu, Cristian Bologa
2017 J jnl
TIN-X: target importance and novelty explorer.
Bioinform.
Daniel Cannon, Jeremy J. Yang, Stephen L. Mathias, Oleg Ursu, Subramani Mani, Anna Waller, Stephan C. Schürer, Lars Juhl Jensen, Larry A. Sklar, Cristian Bologa, Tudor I. Oprea
2016 J jnl
Badapple: promiscuity patterns from noisy evidence.
J. Cheminformatics
Jeremy J. Yang, Oleg Ursu, Christopher A. Lipinski, Larry A. Sklar, Tudor I. Oprea, Cristian Bologa
2016 J jnl
Erratum to: Impact of similarity threshold on the topology of molecular similarity networks and clustering outcomes.
J. Cheminformatics
Gergely Zahoránszky-Köhalmi, Cristian Bologa, Oleg Ursu, Tudor I. Oprea
2016 J jnl
Impact of similarity threshold on the topology of molecular similarity networks and clustering outcomes.
J. Cheminformatics
Gergely Zahoránszky-Köhalmi, Cristian Bologa, Oleg Ursu, Tudor I. Oprea
2015 Misc conf
Protein Drug Target Prioritization for Illumination.
AMIA
Subramani Mani, Daniel Cannon, Tudor I. Oprea, Stephen L. Mathias, Oleg Ursu, Cristian Bologa
2014 — conf
Comparison of Static and Dynamic Resource Allocations for Massively Multiplayer Online Games on Unreliable Resources.
Euro-Par Workshops (1)
Radu Prodan, Alexandru Iosup, Cristian Bologa
2014 — ch.
Deception Detection Within and Across Cultures.
Text Mining
Verónica Pérez-Rosas, Cristian Bologa, Mihai Burzo, Rada Mihalcea
2013 J jnl
Cheminformatics aspects of high throughput screening: from robots to models: symposium summary.
J. Comput. Aided Mol. Des.
Yufeng Jane Tseng, Eric J. Martin, Cristian Bologa, Anang A. Shelat
2013 J jnl
The CARLSBAD Database: A Confederated Database of Chemical Bioactivities.
Database J. Biol. Databases Curation
Stephen L. Mathias, Jarrett Hines-Kay, Jeremy J. Yang, Gergely Zahoránszky-Köhalmi, Cristian Bologa, Oleg Ursu, Tudor I. Oprea
2012 J jnl
Of possible cheminformatics futures.
J. Comput. Aided Mol. Des.
Tudor I. Oprea, Olivier Taboureau, Cristian Bologa
2007 J jnl
Lead-like, drug-like or "Pub-like": how different are they?
J. Comput. Aided Mol. Des.
Tudor I. Oprea, Tharun Kumar Allu, Dan C. Fara, Ramona F. Rad, Liliana Ostopovici, Cristian Bologa
2005 J jnl
Descriptor collision and confusion: Toward the design of descriptors to mask chemical structures.
J. Comput. Aided Mol. Des.
Cristian Bologa, Tharun Kumar Allu, Marius Olah, Michael A. Kappler, Tudor I. Oprea
2004 J jnl
An automated PLS search for biologically relevant QSAR descriptors.
J. Comput. Aided Mol. Des.
Marius Olah, Cristian Bologa, Tudor I. Oprea
2002 J jnl
MTD-PLS: A PLS-Based Variant of the MTD Method, 2. Mapping Ligand-Receptor Interactions. Enzymatic Acetic Acid Esters Hydrolysis.
J. Chem. Inf. Comput. Sci.
Ludovic Kurunczi, Marius Olah, Tudor I. Oprea, Cristian Bologa, Zeno Simon