Connie R. Jimenez

11 papers C 1Journal 7Unranked 3
YearRankTypeTitle / Venue / Authors
2024 J jnl
msproteomics sitereport: reporting DIA-MS phosphoproteomics experiments at site level with ease.
Bioinform.
Thang V. Pham, Alex A. Henneman, Nam X. Truong, Connie R. Jimenez
2023 J jnl
DPHL v.2: An updated and comprehensive DIA pan-human assay library for quantifying more than 14,000 proteins.
Patterns
Zhangzhi Xue, Tiansheng Zhu, Fangfei Zhang, Cheng Zhang, Nan Xiang, Liujia Qian, Xiao Yi, Yaoting Sun, Wei Liu, Xue Cai, Linyan Wang, Xizhe Dai, Liang Yue, Lu Li, Thang Viet Pham, Sander R. Piersma, Qi Xiao, Meng Luo, Cong Lu, Jiang Zhu, Yongfu Zhao, Guangzhi Wang, Junhong Xiao, Tong Liu, Zhiyu Liu, Yi He, Qijun Wu, Tingting Gong, Jianqin Zhu, Zhiguo Zheng, Juan Ye, Yan Li, Connie R. Jimenez, Jun A, Tiannan Guo
2020 J jnl
iq: an R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics.
Bioinform.
Thang Viet Pham, Alex A. Henneman, Connie R. Jimenez
2016 J jnl
Simulated linear test applied to quantitative proteomics.
Bioinform.
Thang V. Pham, Connie R. Jimenez
2012 J jnl
An accurate paired sample test for count data.
Bioinform.
Thang V. Pham, Connie R. Jimenez
2010 J jnl
On the beta-binomial model for analysis of spectral count data in label-free tandem mass spectrometry-based proteomics.
Bioinform.
Thang V. Pham, Sander R. Piersma, Marc Warmoes, Connie R. Jimenez
2008 — conf
OplAnalyzer: A Toolbox for MALDI-TOF Mass Spectrometry Data Analysis.
MDA
Thang V. Pham, Connie R. Jimenez
2007 — conf
Robust Peak Detection and Alignment of nanoLC-FT Mass Spectrometry Data.
EvoBIO
Marius C. Codrea, Connie R. Jimenez, Sander R. Piersma, Jaap Heringa, Elena Marchiori
2007 J jnl
Tools for computational processing of LC-MS datasets: A user's perspective.
Comput. Methods Programs Biomed.
Marius C. Codrea, Connie R. Jimenez, Jaap Heringa, Elena Marchiori
2006 — conf
Robust SVM-Based Biomarker Selection with Noisy Mass Spectrometric Proteomic Data.
EvoWorkshops
Elena Marchiori, Connie R. Jimenez, Mikkel West-Nielsen, Niels H. H. Heegaard
2005 C conf
Feature Selection for Classification with Proteomic Data of Mixed Quality.
CIBCB
Elena Marchiori, Niels H. H. Heegaard, Connie R. Jimenez, Mikkel West-Nielsen