Clemens Wrzodek

14 papers B 2Journal 11
YearRankTypeTitle / Venue / Authors
2023 J jnl
Prediction of polyspecificity from antibody sequence data by machine learning.
Frontiers Bioinform.
Szabolcs Elias, Clemens Wrzodek, Charlotte M. Deane, Alain C. Tissot, Stefan Klostermann, Francesca Ros
2015 J jnl
JSBML 1.0: providing a smorgasbord of options to encode systems biology models.
Bioinform.
Nicolas Rodriguez, Alex Thomas, Leandro H. Watanabe, Ibrahim Y. Vazirabad, Victor Kofia, Harold F. Gómez, Florian Mittag, Jakob Matthes, Jan Rudolph, Finja Wrzodek, Eugen Netz, Alexander Diamantikos, Johannes Eichner, Roland Keller, Clemens Wrzodek, Sebastian Fröhlich, Nathan E. Lewis, Chris J. Myers, Nicolas Le Novère, Bernhard Ø. Palsson, Michael Hucka, Andreas Dräger
2013 J jnl
InCroMAP: integrated analysis of cross-platform microarray and pathway data.
Bioinform.
Clemens Wrzodek, Johannes Eichner, Finja Büchel, Andreas Zell
2013 — —
Inference and integration of biochemical networks with multilayered omics data.
Clemens Wrzodek
2013 J jnl
Path2Models: large-scale generation of computational models from biochemical pathway maps.
BMC Syst. Biol.
Finja Büchel, Nicolas Rodriguez, Neil Swainston, Clemens Wrzodek, Tobias Czauderna, Roland Keller, Florian Mittag, Michael Schubert, Mihai Glont, Martin Golebiewski, Martijn P. van Iersel, Sarah M. Keating, Matthias Rall, Michael Wybrow, Henning Hermjakob, Michael Hucka, Douglas B. Kell, Wolfgang Müller, Pedro Mendes, Andreas Zell, Claudine Chaouiya, Julio Saez-Rodriguez, Falk Schreiber, Camille Laibe, Andreas Dräger, Nicolas Le Novère
2013 J jnl
Precise generation of systems biology models from KEGG pathways.
BMC Syst. Biol.
Clemens Wrzodek, Finja Büchel, Manuel Ruff, Andreas Dräger, Andreas Zell
2012 J jnl
Pathway-based visualization of cross-platform microarray datasets.
Bioinform.
Clemens Wrzodek, Johannes Eichner, Andreas Zell
2012 J jnl
Qualitative translation of relations from BioPAX to SBML qual.
Bioinform.
Finja Büchel, Clemens Wrzodek, Florian Mittag, Andreas Dräger, Johannes Eichner, Nicolas Rodriguez, Nicolas Le Novère, Andreas Zell
2011 J jnl
Inferring statin-induced gene regulatory relationships in primary human hepatocytes.
Bioinform.
Adrian Schröder, Johannes Wollnik, Clemens Wrzodek, Andreas Dräger, Michael Bonin, Oliver Burk, Maria Thomas, Wolfgang E. Thasler, Ulrich M. Zanger, Andreas Zell
2011 B conf
Inferring transcriptional regulators for sets of co-expressed genes by multi-objective evolutionary optimization.
IEEE Congress on Evolutionary Computation
Adrian Schröder, Clemens Wrzodek, Johannes Wollnik, Andreas Dräger, Dierk Wanke, Kenneth W. Berendzen, Andreas Zell
2011 J jnl
JSBML: a flexible Java library for working with SBML.
Bioinform.
Andreas Dräger, Nicolas Rodriguez, Marine Dumousseau, Alexander Dörr, Clemens Wrzodek, Nicolas Le Novère, Andreas Zell, Michael Hucka
2011 J jnl
KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats.
Bioinform.
Clemens Wrzodek, Andreas Dräger, Andreas Zell
2010 J jnl
ModuleMaster: A new tool to decipher transcriptional regulatory networks.
Biosyst.
Clemens Wrzodek, Adrian Schröder, Andreas Dräger, Dierk Wanke, Kenneth W. Berendzen, Marcel Kronfeld, Klaus Harter, Andreas Zell
2006 B conf
Cerco: Supporting Range Queries with a Hierarchically Structured Peer-to-Peer System.
LCN
Simon Rieche, Klaus Wehrle, Leo Petrak, Clemens Wrzodek